RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 NPTX1Q15818 432 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 PLPPR5Q32ZL2 321 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 MRPL2Q5T653 305 aaKnown RBP7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 ATAD3BQ5T9A4 648 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 C6orf89Q6UWU4 347 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 SERPINA11Q86U17 422 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 CDH24Q86UP0 819 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 MED12LQ86YW9 2145 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 TMCO5AQ8N6Q1 288 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 RNF148Q8N7C7 305 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 RBM15BQ8NDT2 890 aaKnown RBP7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 GPR119Q8TDV5 335 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 ZBTB8AQ96BR9 441 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 SLC7A6OSQ96CW6 309 aaPredicted RBP7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 PIGMQ9H3S5 423 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 MED17Q9NVC6 651 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 EXD2Q9NVH0 621 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 CRIM1Q9NZV1 1036 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 TMEM181Q9P2C4 612 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 TAGLN3Q9UI15 199 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 ZNF443Q9Y2A4 671 aaPredicted RBP7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 DOCK7Q96N67 2140 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 A0A1W2PNV4 684 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 CDHR4A6H8M9 788 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 FAM220BPB1ANY3 271 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 ETV2O00321 342 aaPredicted RBP7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 CASKO14936 926 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 DCTN3O75935 186 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 SYNGR4O95473 234 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 THY1P04216 161 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 PABPC4LP0CB38 370 aaKnown RBP7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 UBTFL6P0CB48 400 aaPredicted RBP7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 FCGR2AP12318 317 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 NID1P14543 1247 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 KLK2P20151 261 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 TNFRSF1BP20333 461 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 HTR2AP28223 471 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 MAGEA8P43361 318 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 CCR4P51679 360 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 KCNJ10P78508 379 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 HPCAP84074 193 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 FOXF1Q12946 379 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 CEACAM7Q14002 265 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 PON3Q15166 354 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 DUSP7Q16829 419 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 VMACQ2NL98 169 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 FBXL19-AS1Q494R0 122 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 MMEL1Q495T6 779 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 PDSS1Q5T2R2 415 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 POMZP3Q6PJE2 187 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 TRPM8Q7Z2W7 1104 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 TSEN54Q7Z6J9 526 aaKnown RBP7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 MTERF4Q7Z6M4 381 aaKnown RBP7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 ADGRE4PQ86SQ3 457 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 GGNQ86UU5 652 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 RBM45Q8IUH3 476 aaKnown RBP7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 FAM86B1Q8N7N1 296 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 SMYD1Q8NB12 490 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 OR52P1PQ8NH57 321 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 LINC01560Q8TB33 94 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 FNDC9Q8TBE3 224 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 FAM222BQ8WU58 562 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 FIG4Q92562 907 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 RNF145Q96MT1 663 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 UCN2Q96RP3 112 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 THUMPD3Q9BV44 507 aaKnown RBP7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 POLDIP3Q9BY77 421 aaKnown RBP7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 TMEM185BQ9H7F4 350 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 POLE3Q9NRF9 147 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 CLCF1Q9UBD9 225 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 CD300AQ9UGN4 299 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 MCTS1Q9ULC4 181 aaKnown RBP7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 LIPT1Q9Y234 373 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 FBN2P35556 2912 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 DCHS2Q6V1P9 2916 aa7.85□□□□□ -1.15
PDLIM5-213ENST00000509357 TACC2O95359 2948 aa7.84□□□□□ -1.15
PDLIM5-213ENST00000509357 A0A0G2JPF8 293 aa7.84□□□□□ -1.15
PDLIM5-213ENST00000509357 HNRNPCL2B2RXH8 293 aa7.84□□□□□ -1.15
PDLIM5-213ENST00000509357 HNRNPCL3B7ZW38 293 aa7.84□□□□□ -1.15
PDLIM5-213ENST00000509357 ZNF264O43296 627 aa7.84□□□□□ -1.15
PDLIM5-213ENST00000509357 HNRNPCL1O60812 293 aaKnown RBP7.84□□□□□ -1.15
PDLIM5-213ENST00000509357 LYPD3O95274 346 aa7.84□□□□□ -1.15
PDLIM5-213ENST00000509357 AGR2O95994 175 aa7.84□□□□□ -1.15
PDLIM5-213ENST00000509357 NPPAP01160 153 aa7.84□□□□□ -1.15
PDLIM5-213ENST00000509357 CRHP06850 196 aa7.84□□□□□ -1.15
PDLIM5-213ENST00000509357 HNRNPCL4P0DMR1 293 aa7.84□□□□□ -1.15
PDLIM5-213ENST00000509357 UBL4AP11441 157 aa7.84□□□□□ -1.15
PDLIM5-213ENST00000509357 EPXP11678 715 aa7.84□□□□□ -1.15
PDLIM5-213ENST00000509357 NCK1P16333 377 aa7.84□□□□□ -1.15
PDLIM5-213ENST00000509357 ZNF17P17021 662 aa7.84□□□□□ -1.15
PDLIM5-213ENST00000509357 PRKCAP17252 672 aa7.84□□□□□ -1.15
PDLIM5-213ENST00000509357 PPIBP23284 216 aaKnown RBP7.84□□□□□ -1.15
PDLIM5-213ENST00000509357 EIF1P41567 113 aaKnown RBP7.84□□□□□ -1.15
PDLIM5-213ENST00000509357 CRISP3P54108 245 aa7.84□□□□□ -1.15
PDLIM5-213ENST00000509357 CTBP2P56545 445 aa7.84□□□□□ -1.15
PDLIM5-213ENST00000509357 TXNL4AP83876 142 aaKnown RBP7.84□□□□□ -1.15
PDLIM5-213ENST00000509357 CBX1P83916 185 aa7.84□□□□□ -1.15
PDLIM5-213ENST00000509357 LIPEQ05469 1076 aa7.84□□□□□ -1.15
PDLIM5-213ENST00000509357 EPS8Q12929 822 aa7.84□□□□□ -1.15
PDLIM5-213ENST00000509357 FXNQ16595 210 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms