RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 ALDOBP05062 364 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 LIFP15018 202 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 ETS2P15036 469 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 CYP11B1P15538 503 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 STOMP27105 288 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 GCAP28676 217 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 PPP2R1BP30154 601 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 GPR183P32249 361 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 CDH5P33151 784 aaPredicted RBP2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 TSFMP43897 325 aaKnown RBP2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 RPS5P46782 204 aaKnown RBP2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 OR3A2P47893 321 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 P2RY1P47900 373 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 STK19P49842 368 aaPredicted RBP2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 DUSP3P51452 185 aaPredicted RBP2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 PSMD4P55036 377 aaKnown RBP2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 OR1D5P58170 312 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 PSMC5P62195 406 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 UBE2IP63279 158 aaKnown RBP2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 TNNC1P63316 161 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 EWSR1Q01844 656 aaKnown RBP eCLIP2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 CDR2Q01850 454 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 RAD51Q06609 339 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 CYTH1Q15438 398 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 UBE2V2Q15819 145 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 MS4A18Q3C1V0 323 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 GGTA1PQ4G0N0 100 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 FAM74A3Q4VXF1 159 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 TECRLQ5HYJ1 363 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 SPANXN4Q5MJ08 99 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 DCAF12Q5T6F0 453 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 STUMQ69YW2 141 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 SLC25A25Q6KCM7 469 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 ACSM5Q6NUN0 579 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 ULK3Q6PHR2 472 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 DEGS2Q6QHC5 323 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 ATRAIDQ6UW56 229 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 LRRC31Q6UY01 552 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 RAD9BQ6WBX8 426 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 HSD11B1LQ7Z5J1 315 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 ITIH5Q86UX2 942 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 IFNEQ86WN2 208 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 VRK2Q86Y07 508 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 SLC22A15Q8IZD6 547 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 KIRREL3Q8IZU9 778 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 LSMEM2Q8N112 164 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 JAGN1Q8N5M9 183 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 FNDC5Q8NAU1 212 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 CHDHQ8NE62 594 aaPredicted RBP2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 OR4A4PQ8NGN8 299 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 ANGPTL6Q8NI99 470 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 DTX3LQ8TDB6 740 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 TCTEX1D2Q8WW35 142 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 LIPHQ8WWY8 451 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 ARNTL2Q8WYA1 636 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 UBE2E3Q969T4 207 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 TM4SF19Q96DZ7 209 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 C8orf76Q96K31 380 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 CAPNS2Q96L46 248 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 C9orf72Q96LT7 481 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 NEDD4LQ96PU5 975 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 CYTH2Q99418 400 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 MAPKAP1Q9BPZ7 522 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 RBM4BQ9BQ04 359 aaKnown RBP2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 NIPSNAP3BQ9BS92 247 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 TRIM62Q9BVG3 475 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 NDEL1Q9GZM8 345 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 ZNF385DQ9H6B1 395 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 NIPAL2Q9H841 368 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 Q9HAA7 133 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 NMRAL1Q9HBL8 299 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 VCX3AQ9NNX9 186 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 RAB18Q9NP72 206 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 NRN1Q9NPD7 142 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 ADAP2Q9NPF8 381 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 QPCTLQ9NXS2 382 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 MTCH1Q9NZJ7 389 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 MBD2Q9UBB5 411 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 KLK11Q9UBX7 282 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 CLN8Q9UBY8 286 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 LNPEPQ9UIQ6 1025 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 ANAPC7Q9UJX3 599 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 ZNF221Q9UK13 617 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 POLDIP2Q9Y2S7 368 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 OARD1Q9Y530 152 aa2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 CSDC2Q9Y534 153 aaKnown RBP2.02□□□□□ -2.09
DEPDC1B-204ENST00000509006 AQRO60306 1485 aaKnown RBP eCLIP2.01□□□□□ -2.09
DEPDC1B-204ENST00000509006 SH3TC1Q8TE82 1336 aa2.01□□□□□ -2.09
DEPDC1B-204ENST00000509006 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.01□□□□□ -2.09
DEPDC1B-204ENST00000509006 IGLV9-49A0A0B4J1Y8 123 aa2.01□□□□□ -2.09
DEPDC1B-204ENST00000509006 A0A0G2JLW4 131 aa2.01□□□□□ -2.09
DEPDC1B-204ENST00000509006 A0A1W2PQ72 361 aa2.01□□□□□ -2.09
DEPDC1B-204ENST00000509006 TMEM120BA0PK00 339 aa2.01□□□□□ -2.09
DEPDC1B-204ENST00000509006 SH3PXD2BA1X283 911 aa2.01□□□□□ -2.09
DEPDC1B-204ENST00000509006 BCLAF3A2AJT9 711 aaKnown RBP2.01□□□□□ -2.09
DEPDC1B-204ENST00000509006 OR5H15A6NDH6 313 aa2.01□□□□□ -2.09
DEPDC1B-204ENST00000509006 C5orf60A6NFR6 353 aa2.01□□□□□ -2.09
DEPDC1B-204ENST00000509006 OR2AG2A6NM03 316 aa2.01□□□□□ -2.09
DEPDC1B-204ENST00000509006 LRRIQ3A6PVS8 624 aaPredicted RBP2.01□□□□□ -2.09
DEPDC1B-204ENST00000509006 CENPXA8MT69 81 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms