RNA–Protein interactions for RNA: ENST00000508343.1

TRIO-211, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-211ENST00000508343 MYBPHQ13203 477 aa13.48□□□□□ -0.25
TRIO-211ENST00000508343 LARS2Q15031 903 aaKnown RBP13.48□□□□□ -0.25
TRIO-211ENST00000508343 RUNDC3AQ59EK9 446 aa13.48□□□□□ -0.25
TRIO-211ENST00000508343 RPS26P11Q5JNZ5 115 aaPredicted RBP13.48□□□□□ -0.25
TRIO-211ENST00000508343 GCNT6Q5T4J0 391 aa13.48□□□□□ -0.25
TRIO-211ENST00000508343 C3orf33Q6P1S2 294 aa13.48□□□□□ -0.25
TRIO-211ENST00000508343 GRINAQ7Z429 371 aa13.48□□□□□ -0.25
TRIO-211ENST00000508343 ZNF440Q8IYI8 595 aa13.48□□□□□ -0.25
TRIO-211ENST00000508343 ROBO4Q8WZ75 1007 aa13.48□□□□□ -0.25
TRIO-211ENST00000508343 REXO5Q96IC2 774 aaKnown RBP13.48□□□□□ -0.25
TRIO-211ENST00000508343 CCDC106Q9BWC9 280 aa13.48□□□□□ -0.25
TRIO-211ENST00000508343 ARMC7Q9H6L4 198 aa13.48□□□□□ -0.25
TRIO-211ENST00000508343 CACYBPQ9HB71 228 aaKnown RBP13.48□□□□□ -0.25
TRIO-211ENST00000508343 CTPS2Q9NRF8 586 aa13.48□□□□□ -0.25
TRIO-211ENST00000508343 RLIMQ9NVW2 624 aa13.48□□□□□ -0.25
TRIO-211ENST00000508343 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.48□□□□□ -0.25
TRIO-211ENST00000508343 IFT52Q9Y366 437 aa13.48□□□□□ -0.25
TRIO-211ENST00000508343 EMC9Q9Y3B6 208 aa13.48□□□□□ -0.25
TRIO-211ENST00000508343 SPIN1Q9Y657 262 aaPredicted RBP13.48□□□□□ -0.25
TRIO-211ENST00000508343 ANKHD1Q8IWZ3 2542 aaKnown RBP13.48□□□□□ -0.25
TRIO-211ENST00000508343 AP3D1O14617 1153 aa13.47□□□□□ -0.25
TRIO-211ENST00000508343 SS18L1O75177 396 aaPredicted RBP13.47□□□□□ -0.25
TRIO-211ENST00000508343 PGM3O95394 542 aa13.47□□□□□ -0.25
TRIO-211ENST00000508343 ARAFP10398 606 aa13.47□□□□□ -0.25
TRIO-211ENST00000508343 CD8BP10966 210 aa13.47□□□□□ -0.25
TRIO-211ENST00000508343 UQCRBP14927 111 aa13.47□□□□□ -0.25
TRIO-211ENST00000508343 CTBP2P56545 445 aa13.47□□□□□ -0.25
TRIO-211ENST00000508343 RAC3P60763 192 aa13.47□□□□□ -0.25
TRIO-211ENST00000508343 SF3A3Q12874 501 aaKnown RBP eCLIP13.47□□□□□ -0.25
TRIO-211ENST00000508343 EPS8Q12929 822 aa13.47□□□□□ -0.25
TRIO-211ENST00000508343 ZNF239Q16600 458 aaKnown RBP13.47□□□□□ -0.25
TRIO-211ENST00000508343 RNF220Q5VTB9 566 aa13.47□□□□□ -0.25
TRIO-211ENST00000508343 ZNF836Q6ZNA1 936 aa13.47□□□□□ -0.25
TRIO-211ENST00000508343 DHDDSQ86SQ9 333 aa13.47□□□□□ -0.25
TRIO-211ENST00000508343 RETREG3Q86VR2 466 aa13.47□□□□□ -0.25
TRIO-211ENST00000508343 ADGRG3Q86Y34 549 aa13.47□□□□□ -0.25
TRIO-211ENST00000508343 C10orf111Q8N326 155 aa13.47□□□□□ -0.25
TRIO-211ENST00000508343 BBS10Q8TAM1 723 aa13.47□□□□□ -0.25
TRIO-211ENST00000508343 FAM222BQ8WU58 562 aa13.47□□□□□ -0.25
TRIO-211ENST00000508343 SLC25A43Q8WUT9 341 aaPredicted RBP13.47□□□□□ -0.25
TRIO-211ENST00000508343 OR5B2Q96R09 309 aa13.47□□□□□ -0.25
TRIO-211ENST00000508343 SPATA9Q9BWV2 254 aa13.47□□□□□ -0.25
TRIO-211ENST00000508343 SRXN1Q9BYN0 137 aa13.47□□□□□ -0.25
TRIO-211ENST00000508343 IKZF5Q9H5V7 419 aa13.47□□□□□ -0.25
TRIO-211ENST00000508343 COQ10BQ9H8M1 238 aa13.47□□□□□ -0.25
TRIO-211ENST00000508343 GALNT8Q9NY28 637 aa13.47□□□□□ -0.25
TRIO-211ENST00000508343 CRIM1Q9NZV1 1036 aa13.47□□□□□ -0.25
TRIO-211ENST00000508343 CHRNA9Q9UGM1 479 aa13.47□□□□□ -0.25
TRIO-211ENST00000508343 CLEC4AQ9UMR7 237 aa13.47□□□□□ -0.25
TRIO-211ENST00000508343 PROCRQ9UNN8 238 aa13.47□□□□□ -0.25
TRIO-211ENST00000508343 ZNF443Q9Y2A4 671 aaPredicted RBP13.47□□□□□ -0.25
TRIO-211ENST00000508343 A0A1W2PNR3 127 aa13.46□□□□□ -0.25
TRIO-211ENST00000508343 TUBAL3A6NHL2 446 aa13.46□□□□□ -0.25
TRIO-211ENST00000508343 ETS2P15036 469 aa13.46□□□□□ -0.25
TRIO-211ENST00000508343 SLC1A3P43003 542 aa13.46□□□□□ -0.25
TRIO-211ENST00000508343 PCYT1AP49585 367 aa13.46□□□□□ -0.25
TRIO-211ENST00000508343 CLK1P49759 484 aaKnown RBP13.46□□□□□ -0.25
TRIO-211ENST00000508343 CDK6Q00534 326 aa13.46□□□□□ -0.25
TRIO-211ENST00000508343 RNPS1Q15287 305 aaKnown RBP13.46□□□□□ -0.25
TRIO-211ENST00000508343 SYT14P1Q58G82 188 aa13.46□□□□□ -0.25
TRIO-211ENST00000508343 ZNF311Q5JNZ3 666 aa13.46□□□□□ -0.25
TRIO-211ENST00000508343 REEP3Q6NUK4 255 aa13.46□□□□□ -0.25
TRIO-211ENST00000508343 ZNF474Q6S9Z5 364 aaPredicted RBP13.46□□□□□ -0.25
TRIO-211ENST00000508343 TMPPEQ6ZT21 453 aa13.46□□□□□ -0.25
TRIO-211ENST00000508343 FCRLAQ7L513 359 aa13.46□□□□□ -0.25
TRIO-211ENST00000508343 ZNF550Q7Z398 422 aa13.46□□□□□ -0.25
TRIO-211ENST00000508343 ZZZ3Q8IYH5 903 aa13.46□□□□□ -0.25
TRIO-211ENST00000508343 CLIP4Q8N3C7 705 aa13.46□□□□□ -0.25
TRIO-211ENST00000508343 ZNF610Q8N9Z0 462 aa13.46□□□□□ -0.25
TRIO-211ENST00000508343 OR6K3Q8NGY3 331 aa13.46□□□□□ -0.25
TRIO-211ENST00000508343 NFKBIDQ8NI38 313 aa13.46□□□□□ -0.25
TRIO-211ENST00000508343 RNF128Q8TEB7 428 aa13.46□□□□□ -0.25
TRIO-211ENST00000508343 LURAP1Q96LR2 239 aa13.46□□□□□ -0.25
TRIO-211ENST00000508343 ANKRD27Q96NW4 1050 aa13.46□□□□□ -0.25
TRIO-211ENST00000508343 ZNF317Q96PQ6 595 aaPredicted RBP13.46□□□□□ -0.25
TRIO-211ENST00000508343 CGREF1Q99674 301 aa13.46□□□□□ -0.25
TRIO-211ENST00000508343 CPPED1Q9BRF8 314 aaPredicted RBP13.46□□□□□ -0.25
TRIO-211ENST00000508343 SLC39A3Q9BRY0 314 aa13.46□□□□□ -0.25
TRIO-211ENST00000508343 OPN3Q9H1Y3 402 aaPredicted RBP13.46□□□□□ -0.25
TRIO-211ENST00000508343 TMEM38AQ9H6F2 299 aa13.46□□□□□ -0.25
TRIO-211ENST00000508343 SAR1AQ9NR31 198 aa13.46□□□□□ -0.25
TRIO-211ENST00000508343 PLSCR4Q9NRQ2 329 aa13.46□□□□□ -0.25
TRIO-211ENST00000508343 KLHL14Q9P2G3 628 aa13.46□□□□□ -0.25
TRIO-211ENST00000508343 SULT2B1O00204 365 aa13.45□□□□□ -0.26
TRIO-211ENST00000508343 PRKD3O94806 890 aa13.45□□□□□ -0.26
TRIO-211ENST00000508343 GKN3PP0CG01 181 aa13.45□□□□□ -0.26
TRIO-211ENST00000508343 TFPIP10646 304 aa13.45□□□□□ -0.26
TRIO-211ENST00000508343 ENPP1P22413 925 aa13.45□□□□□ -0.26
TRIO-211ENST00000508343 SLC6A2P23975 617 aa13.45□□□□□ -0.26
TRIO-211ENST00000508343 CPOXP36551 454 aa13.45□□□□□ -0.26
TRIO-211ENST00000508343 ACAA2P42765 397 aaKnown RBP13.45□□□□□ -0.26
TRIO-211ENST00000508343 POLR2HP52434 150 aaKnown RBP13.45□□□□□ -0.26
TRIO-211ENST00000508343 MAP2K6P52564 334 aa13.45□□□□□ -0.26
TRIO-211ENST00000508343 KRTAP10-9P60411 292 aa13.45□□□□□ -0.26
TRIO-211ENST00000508343 CSNK2A1P68400 391 aaPredicted RBP13.45□□□□□ -0.26
TRIO-211ENST00000508343 KLF10Q13118 480 aa13.45□□□□□ -0.26
TRIO-211ENST00000508343 NFYCQ13952 458 aa13.45□□□□□ -0.26
TRIO-211ENST00000508343 ADRM1Q16186 407 aa13.45□□□□□ -0.26
TRIO-211ENST00000508343 SLC43A2Q8N370 569 aa13.45□□□□□ -0.26
TRIO-211ENST00000508343 LINC01560Q8TB33 94 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms