RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 DCAF13Q9NV06 445 aaKnown RBP7.65□□□□□ -1.18
PDGFC-205ENST00000506880 TAS2R1Q9NYW7 299 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 ADA2Q9NZK5 511 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 MED11Q9P086 117 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 RPS6KB2Q9UBS0 482 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 FOXD3Q9UJU5 478 aaPredicted RBP7.65□□□□□ -1.18
PDGFC-205ENST00000506880 MCTS1Q9ULC4 181 aaKnown RBP7.65□□□□□ -1.18
PDGFC-205ENST00000506880 FLNCQ14315 2725 aa7.65□□□□□ -1.19
PDGFC-205ENST00000506880 SPTAN1Q13813 2472 aaKnown RBP7.64□□□□□ -1.19
PDGFC-205ENST00000506880 MED12Q93074 2177 aa7.64□□□□□ -1.19
PDGFC-205ENST00000506880 USP9XQ93008 2570 aaPredicted RBP7.64□□□□□ -1.19
PDGFC-205ENST00000506880 A0A1B0GTH9 108 aa7.64□□□□□ -1.19
PDGFC-205ENST00000506880 MBD3L4A6NDZ8 208 aaPredicted RBP7.64□□□□□ -1.19
PDGFC-205ENST00000506880 MBD3L3A6NE82 208 aaPredicted RBP7.64□□□□□ -1.19
PDGFC-205ENST00000506880 WIPF3A6NGB9 483 aa7.64□□□□□ -1.19
PDGFC-205ENST00000506880 MBD3L5A6NJ08 208 aaPredicted RBP7.64□□□□□ -1.19
PDGFC-205ENST00000506880 AQP12BA6NM10 295 aa7.64□□□□□ -1.19
PDGFC-205ENST00000506880 A8MVM7 634 aa7.64□□□□□ -1.19
PDGFC-205ENST00000506880 SEC14L5O43304 696 aa7.64□□□□□ -1.19
PDGFC-205ENST00000506880 CHP2O43745 196 aa7.64□□□□□ -1.19
PDGFC-205ENST00000506880 DNAJC8O75937 253 aaPredicted RBP7.64□□□□□ -1.19
PDGFC-205ENST00000506880 OR5F1O95221 314 aa7.64□□□□□ -1.19
PDGFC-205ENST00000506880 CNOT4O95628 575 aaKnown RBP7.64□□□□□ -1.19
PDGFC-205ENST00000506880 MT-ATP6P00846 226 aa7.64□□□□□ -1.19
PDGFC-205ENST00000506880 NUDT7P0C024 238 aa7.64□□□□□ -1.19
PDGFC-205ENST00000506880 T-ENOLP0DO92 83 aa7.64□□□□□ -1.19
PDGFC-205ENST00000506880 CD247P20963 164 aa7.64□□□□□ -1.19
PDGFC-205ENST00000506880 CLDN18P56856 261 aa7.64□□□□□ -1.19
PDGFC-205ENST00000506880 PMP22Q01453 160 aa7.64□□□□□ -1.19
PDGFC-205ENST00000506880 SELPLGQ14242 412 aa7.64□□□□□ -1.19
PDGFC-205ENST00000506880 NPTX1Q15818 432 aa7.64□□□□□ -1.19
PDGFC-205ENST00000506880 ZNF239Q16600 458 aaKnown RBP7.64□□□□□ -1.19
PDGFC-205ENST00000506880 GXYLT1Q4G148 440 aa7.64□□□□□ -1.19
PDGFC-205ENST00000506880 IFI44LQ53G44 452 aa7.64□□□□□ -1.19
PDGFC-205ENST00000506880 SYT14P1Q58G82 188 aa7.64□□□□□ -1.19
PDGFC-205ENST00000506880 CBLN3Q6UW01 205 aa7.64□□□□□ -1.19
PDGFC-205ENST00000506880 B3GNT6Q6ZMB0 384 aa7.64□□□□□ -1.19
PDGFC-205ENST00000506880 PLEKHM3Q6ZWE6 761 aa7.64□□□□□ -1.19
PDGFC-205ENST00000506880 FKBP9P1Q75LS8 142 aa7.64□□□□□ -1.19
PDGFC-205ENST00000506880 AQP12AQ8IXF9 295 aa7.64□□□□□ -1.19
PDGFC-205ENST00000506880 ULK2Q8IYT8 1036 aa7.64□□□□□ -1.19
PDGFC-205ENST00000506880 RNF113BQ8IZP6 322 aaKnown RBP7.64□□□□□ -1.19
PDGFC-205ENST00000506880 ADPRHL1Q8NDY3 354 aa7.64□□□□□ -1.19
PDGFC-205ENST00000506880 MBD3L2Q8NHZ7 208 aaPredicted RBP7.64□□□□□ -1.19
PDGFC-205ENST00000506880 ZG16BQ96DA0 208 aa7.64□□□□□ -1.19
PDGFC-205ENST00000506880 WDYHV1Q96HA8 205 aa7.64□□□□□ -1.19
PDGFC-205ENST00000506880 KLHL15Q96M94 604 aa7.64□□□□□ -1.19
PDGFC-205ENST00000506880 NSMCE2Q96MF7 247 aa7.64□□□□□ -1.19
PDGFC-205ENST00000506880 ZNF347Q96SE7 839 aa7.64□□□□□ -1.19
PDGFC-205ENST00000506880 SLC39A3Q9BRY0 314 aa7.64□□□□□ -1.19
PDGFC-205ENST00000506880 RTN4RQ9BZR6 473 aa7.64□□□□□ -1.19
PDGFC-205ENST00000506880 KLHL4Q9C0H6 718 aa7.64□□□□□ -1.19
PDGFC-205ENST00000506880 FLRT3Q9NZU0 649 aa7.64□□□□□ -1.19
PDGFC-205ENST00000506880 ZNF629Q9UEG4 869 aaPredicted RBP7.64□□□□□ -1.19
PDGFC-205ENST00000506880 CORINQ9Y5Q5 1042 aa7.64□□□□□ -1.19
PDGFC-205ENST00000506880 A0A087WUJ7 227 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 A0A0B4J2E0 115 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 LOC102725191A0A1B0GVB3 256 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 A0A1B0GX12 115 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 TRAPPC13A5PLN9 417 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 OR6C65A6NJZ3 312 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 G3V3Y1 287 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 GPR171O14626 319 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 NME6O75414 186 aaPredicted RBP7.63□□□□□ -1.19
PDGFC-205ENST00000506880 KRT36O76013 467 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 UBOX5O94941 541 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 GOSR1O95249 250 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 IL2RAP01589 272 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 IFNW1P05000 195 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 RHCEP18577 417 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 IL11P20809 199 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 CXCR1P25024 350 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 SLC7A1P30825 629 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 IDH2P48735 452 aaKnown RBP7.63□□□□□ -1.19
PDGFC-205ENST00000506880 CCR4P51679 360 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 AGFG1P52594 562 aaKnown RBP7.63□□□□□ -1.19
PDGFC-205ENST00000506880 ZNF136P52737 540 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 SLC35A1P78382 337 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 DMTNQ08495 405 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 ST3GAL3Q11203 375 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 DUSP7Q16829 419 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 SLC25A35Q3KQZ1 300 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 ACSF3Q4G176 576 aaPredicted RBP7.63□□□□□ -1.19
PDGFC-205ENST00000506880 CYBRD1Q53TN4 286 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 WIPI1Q5MNZ9 446 aaPredicted RBP7.63□□□□□ -1.19
PDGFC-205ENST00000506880 C1orf185Q5T7R7 199 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 GLYATQ6IB77 296 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 PGM2L1Q6PCE3 622 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 TMPPEQ6ZT21 453 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 CCDC121Q6ZUS5 278 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 PIWIL3Q7Z3Z3 882 aaKnown RBP7.63□□□□□ -1.19
PDGFC-205ENST00000506880 ATG4DQ86TL0 474 aaPredicted RBP7.63□□□□□ -1.19
PDGFC-205ENST00000506880 VRK2Q86Y07 508 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 DOLPP1Q86YN1 238 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 FAM26EQ8N5C1 309 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 SCAIQ8N9R8 606 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 OR2V1Q8NHB1 315 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 MFSD8Q8NHS3 518 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 CNOT9Q92600 299 aaKnown RBP7.63□□□□□ -1.19
PDGFC-205ENST00000506880 RND1Q92730 232 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms