RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 FOXF1Q12946 379 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 SCARB2Q14108 478 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 MAPK11Q15759 364 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 TOMM34Q15785 309 aaPredicted RBP6.54□□□□□ -1.36
GYPB-206ENST00000506516 CYP51A1Q16850 503 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 SLC25A53Q5H9E4 307 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 MRPL2Q5T653 305 aaKnown RBP6.54□□□□□ -1.36
GYPB-206ENST00000506516 RNF220Q5VTB9 566 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 REP15Q6BDI9 236 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 GTF2IRD2BQ6EKJ0 949 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 OR2A2Q6IF42 318 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 NANOGP8Q6NSW7 305 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 ESPNLQ6ZVH7 1005 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 NCCRP1Q6ZVX7 275 aaPredicted RBP6.54□□□□□ -1.36
GYPB-206ENST00000506516 ZNF550Q7Z398 422 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 GRINAQ7Z429 371 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 HMGN2P46Q86SG4 172 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 SERPINA11Q86U17 422 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 GTF2IRD2Q86UP8 949 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 SNX32Q86XE0 403 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 VRK2Q86Y07 508 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 CCDC71Q8IV32 467 aaPredicted RBP6.54□□□□□ -1.36
GYPB-206ENST00000506516 SLC30A8Q8IWU4 369 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 C11orf65Q8NCR3 313 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 HIPK4Q8NE63 616 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 FAM71CQ8NEG0 241 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 ATP6V1C2Q8NEY4 427 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 OR8J3Q8NGG0 315 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 MBD3L2Q8NHZ7 208 aaPredicted RBP6.54□□□□□ -1.36
GYPB-206ENST00000506516 NFKBIDQ8NI38 313 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 POC1BQ8TC44 478 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 CNOT9Q92600 299 aaKnown RBP6.54□□□□□ -1.36
GYPB-206ENST00000506516 MAL2Q969L2 176 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 LRRC46Q96FV0 321 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 HOPXQ9BPY8 73 aaPredicted RBP6.54□□□□□ -1.36
GYPB-206ENST00000506516 ECSITQ9BQ95 431 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 CCDC106Q9BWC9 280 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 KAT8Q9H7Z6 458 aaKnown RBP6.54□□□□□ -1.36
GYPB-206ENST00000506516 NANOGQ9H9S0 305 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 EFCAB1Q9HAE3 211 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 KLHL28Q9NXS3 571 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 Q9UFV3 132 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 SLC13A4Q9UKG4 626 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 MCTS1Q9ULC4 181 aaKnown RBP6.54□□□□□ -1.36
GYPB-206ENST00000506516 ANGPT4Q9Y264 503 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 ZNF443Q9Y2A4 671 aaPredicted RBP6.54□□□□□ -1.36
GYPB-206ENST00000506516 AP3M1Q9Y2T2 418 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 SPIN1Q9Y657 262 aaPredicted RBP6.54□□□□□ -1.36
GYPB-206ENST00000506516 EML6Q6ZMW3 1958 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 NINQ8N4C6 2090 aa6.54□□□□□ -1.36
GYPB-206ENST00000506516 FASNP49327 2511 aaKnown RBP6.53□□□□□ -1.36
GYPB-206ENST00000506516 DSPPQ9NZW4 1301 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 MYO18BQ8IUG5 2567 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 CENPVL1A0A0U1RR11 272 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 SLC22A20A6NK97 555 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 CLDN24A6NM45 220 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 ETV2O00321 342 aaPredicted RBP6.53□□□□□ -1.36
GYPB-206ENST00000506516 FAAHO00519 579 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 NDUFAB1O14561 156 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 TNFSF11O14788 317 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 DCTN3O75935 186 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 TOXO94900 526 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 NTN1O95631 604 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 IL18BPO95998 194 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 OPN1LWP04000 364 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 PABPC4LP0CB38 370 aaKnown RBP6.53□□□□□ -1.36
GYPB-206ENST00000506516 TMIGD3P0DMS9 266 aaPredicted RBP6.53□□□□□ -1.36
GYPB-206ENST00000506516 FCGR2AP12318 317 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 COX4I1P13073 169 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 HOXB4P17483 251 aaPredicted RBP6.53□□□□□ -1.36
GYPB-206ENST00000506516 BMP5P22003 454 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 SLC7A1P30825 629 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 PRKAR1BP31321 381 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 SFTPDP35247 375 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 SLC1A3P43003 542 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 CLK1P49759 484 aaKnown RBP6.53□□□□□ -1.36
GYPB-206ENST00000506516 MAP2K6P52564 334 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 MTPNP58546 118 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 MERTKQ12866 999 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 SELENBP1Q13228 472 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 CAPRIN1Q14444 709 aaKnown RBP6.53□□□□□ -1.36
GYPB-206ENST00000506516 PON3Q15166 354 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 ADRM1Q16186 407 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 SLC25A35Q3KQZ1 300 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 TMEM176BQ3YBM2 270 aaPredicted RBP6.53□□□□□ -1.36
GYPB-206ENST00000506516 INTS11Q5TA45 600 aaKnown RBP6.53□□□□□ -1.36
GYPB-206ENST00000506516 HBMQ6B0K9 141 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 PPP4R4Q6NUP7 873 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 C3orf33Q6P1S2 294 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 POMZP3Q6PJE2 187 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 ZNF836Q6ZNA1 936 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 SEM1Q6ZVN7 128 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 PLEKHM3Q6ZWE6 761 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 PIGWQ7Z7B1 504 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 ADGRE4PQ86SQ3 457 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 GGNQ86UU5 652 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 TNIP2Q8NFZ5 429 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 OR10A6Q8NH74 314 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 OR2V1Q8NHB1 315 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 SLC26A7Q8TE54 656 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms