RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 GTF2IRD2BQ6EKJ0 949 aa14.98□□□□□ -0.01
SNCA-209ENST00000506244 SERPINA11Q86U17 422 aa14.98□□□□□ -0.01
SNCA-209ENST00000506244 GTF2IRD2Q86UP8 949 aa14.98□□□□□ -0.01
SNCA-209ENST00000506244 RP9Q8TA86 221 aaKnown RBP14.98□□□□□ -0.01
SNCA-209ENST00000506244 MARVELD3Q96A59 401 aa14.98□□□□□ -0.01
SNCA-209ENST00000506244 ELAC2Q9BQ52 826 aaKnown RBP14.98□□□□□ -0.01
SNCA-209ENST00000506244 CCDC106Q9BWC9 280 aa14.98□□□□□ -0.01
SNCA-209ENST00000506244 KAT8Q9H7Z6 458 aaKnown RBP14.98□□□□□ -0.01
SNCA-209ENST00000506244 GLRX2Q9NS18 164 aa14.98□□□□□ -0.01
SNCA-209ENST00000506244 ARMCX1Q9P291 453 aa14.98□□□□□ -0.01
SNCA-209ENST00000506244 CHRNA9Q9UGM1 479 aa14.98□□□□□ -0.01
SNCA-209ENST00000506244 UTP20O75691 2785 aaKnown RBP14.98□□□□□ -0.01
SNCA-209ENST00000506244 A0A0J9YW62 118 aa14.97□□□□□ -0.01
SNCA-209ENST00000506244 A0A1W2PNV4 684 aa14.97□□□□□ -0.01
SNCA-209ENST00000506244 C19orf84I3L1E1 186 aa14.97□□□□□ -0.01
SNCA-209ENST00000506244 SLC1A3P43003 542 aa14.97□□□□□ -0.01
SNCA-209ENST00000506244 POLR2HP52434 150 aaKnown RBP14.97□□□□□ -0.01
SNCA-209ENST00000506244 SEC24CP53992 1094 aa14.97□□□□□ -0.01
SNCA-209ENST00000506244 CAPRIN1Q14444 709 aaKnown RBP14.97□□□□□ -0.01
SNCA-209ENST00000506244 ZNF239Q16600 458 aaKnown RBP14.97□□□□□ -0.01
SNCA-209ENST00000506244 SYT14P1Q58G82 188 aa14.97□□□□□ -0.01
SNCA-209ENST00000506244 INTS11Q5TA45 600 aaKnown RBP14.97□□□□□ -0.01
SNCA-209ENST00000506244 ZNF787Q6DD87 383 aa14.97□□□□□ -0.01
SNCA-209ENST00000506244 POMZP3Q6PJE2 187 aa14.97□□□□□ -0.01
SNCA-209ENST00000506244 MEX3BQ6ZN04 569 aaKnown RBP14.97□□□□□ -0.01
SNCA-209ENST00000506244 NET1Q7Z628 596 aaPredicted RBP14.97□□□□□ -0.01
SNCA-209ENST00000506244 MCEMP1Q8IX19 187 aa14.97□□□□□ -0.01
SNCA-209ENST00000506244 CNEP1R1Q8N9A8 125 aa14.97□□□□□ -0.01
SNCA-209ENST00000506244 ACBD4Q8NC06 268 aa14.97□□□□□ -0.01
SNCA-209ENST00000506244 ATP6V1C2Q8NEY4 427 aa14.97□□□□□ -0.01
SNCA-209ENST00000506244 OSTF1Q92882 214 aa14.97□□□□□ -0.01
SNCA-209ENST00000506244 RNASE6Q93091 150 aaKnown RBP14.97□□□□□ -0.01
SNCA-209ENST00000506244 LRRC58Q96CX6 371 aa14.97□□□□□ -0.01
SNCA-209ENST00000506244 GMPPAQ96IJ6 420 aaPredicted RBP14.97□□□□□ -0.01
SNCA-209ENST00000506244 ENKD1Q9H0I2 346 aa14.97□□□□□ -0.01
SNCA-209ENST00000506244 EVA1AQ9H8M9 152 aa14.97□□□□□ -0.01
SNCA-209ENST00000506244 NPDC1Q9NQX5 325 aaPredicted RBP14.97□□□□□ -0.01
SNCA-209ENST00000506244 RLIMQ9NVW2 624 aa14.97□□□□□ -0.01
SNCA-209ENST00000506244 SLC13A4Q9UKG4 626 aa14.97□□□□□ -0.01
SNCA-209ENST00000506244 EMC9Q9Y3B6 208 aa14.97□□□□□ -0.01
SNCA-209ENST00000506244 NBPF19A0A087WUL8 3843 aa14.96□□□□□ -0.01
SNCA-209ENST00000506244 LOC100653049A0A140TA62 436 aa14.96□□□□□ -0.01
SNCA-209ENST00000506244 AP3D1O14617 1153 aa14.96□□□□□ -0.01
SNCA-209ENST00000506244 SNX3O60493 162 aa14.96□□□□□ -0.01
SNCA-209ENST00000506244 KRT34O76011 436 aa14.96□□□□□ -0.01
SNCA-209ENST00000506244 OPN1LWP04000 364 aa14.96□□□□□ -0.01
SNCA-209ENST00000506244 IGFBP2P18065 325 aa14.96□□□□□ -0.01
SNCA-209ENST00000506244 CPA2P48052 419 aa14.96□□□□□ -0.01
SNCA-209ENST00000506244 CLK1P49759 484 aaKnown RBP14.96□□□□□ -0.01
SNCA-209ENST00000506244 CSNK2A1P68400 391 aaPredicted RBP14.96□□□□□ -0.01
SNCA-209ENST00000506244 FOXF2Q12947 444 aa14.96□□□□□ -0.01
SNCA-209ENST00000506244 RNPS1Q15287 305 aaKnown RBP14.96□□□□□ -0.01
SNCA-209ENST00000506244 ADRM1Q16186 407 aa14.96□□□□□ -0.01
SNCA-209ENST00000506244 WBP2NLQ6ICG8 309 aa14.96□□□□□ -0.01
SNCA-209ENST00000506244 DHRS4L2Q6PKH6 230 aa14.96□□□□□ -0.01
SNCA-209ENST00000506244 PLXDC2Q6UX71 529 aa14.96□□□□□ -0.01
SNCA-209ENST00000506244 ARPINQ7Z6K5 226 aa14.96□□□□□ -0.01
SNCA-209ENST00000506244 INTS1Q8N201 2190 aaKnown RBP14.96□□□□□ -0.01
SNCA-209ENST00000506244 C10orf111Q8N326 155 aa14.96□□□□□ -0.01
SNCA-209ENST00000506244 DDIT4LQ96D03 193 aa14.96□□□□□ -0.01
SNCA-209ENST00000506244 OR5B2Q96R09 309 aa14.96□□□□□ -0.01
SNCA-209ENST00000506244 COQ10BQ9H8M1 238 aa14.96□□□□□ -0.01
SNCA-209ENST00000506244 CTPS2Q9NRF8 586 aa14.96□□□□□ -0.01
SNCA-209ENST00000506244 KLHL28Q9NXS3 571 aa14.96□□□□□ -0.01
SNCA-209ENST00000506244 UNC79Q9P2D8 2635 aa14.96□□□□□ -0.01
SNCA-209ENST00000506244 AP3M1Q9Y2T2 418 aa14.96□□□□□ -0.01
SNCA-209ENST00000506244 FXYD1O00168 92 aa14.95□□□□□ -0.02
SNCA-209ENST00000506244 SYT5O00445 386 aa14.95□□□□□ -0.02
SNCA-209ENST00000506244 EFNA2O43921 213 aa14.95□□□□□ -0.02
SNCA-209ENST00000506244 ADAM11O75078 769 aa14.95□□□□□ -0.02
SNCA-209ENST00000506244 TNFSF13O75888 250 aa14.95□□□□□ -0.02
SNCA-209ENST00000506244 AQP8O94778 261 aa14.95□□□□□ -0.02
SNCA-209ENST00000506244 TFPIP10646 304 aa14.95□□□□□ -0.02
SNCA-209ENST00000506244 DRD4P21917 467 aa14.95□□□□□ -0.02
SNCA-209ENST00000506244 SHC1P29353 583 aa14.95□□□□□ -0.02
SNCA-209ENST00000506244 AQP1P29972 269 aa14.95□□□□□ -0.02
SNCA-209ENST00000506244 UQCRC1P31930 480 aa14.95□□□□□ -0.02
SNCA-209ENST00000506244 PCGF2P35227 344 aa14.95□□□□□ -0.02
SNCA-209ENST00000506244 CTBP2P56545 445 aa14.95□□□□□ -0.02
SNCA-209ENST00000506244 RAC3P60763 192 aa14.95□□□□□ -0.02
SNCA-209ENST00000506244 NCALDP61601 193 aa14.95□□□□□ -0.02
SNCA-209ENST00000506244 SELPLGQ14242 412 aa14.95□□□□□ -0.02
SNCA-209ENST00000506244 NANOGP8Q6NSW7 305 aa14.95□□□□□ -0.02
SNCA-209ENST00000506244 FAM214BQ7L5A3 538 aa14.95□□□□□ -0.02
SNCA-209ENST00000506244 GDF7Q7Z4P5 450 aa14.95□□□□□ -0.02
SNCA-209ENST00000506244 MTDHQ86UE4 582 aaKnown RBP14.95□□□□□ -0.02
SNCA-209ENST00000506244 KIF18BQ86Y91 864 aa14.95□□□□□ -0.02
SNCA-209ENST00000506244 PTOV1Q86YD1 416 aa14.95□□□□□ -0.02
SNCA-209ENST00000506244 ARMC8Q8IUR7 673 aa14.95□□□□□ -0.02
SNCA-209ENST00000506244 SLC43A2Q8N370 569 aa14.95□□□□□ -0.02
SNCA-209ENST00000506244 OR10A6Q8NH74 314 aa14.95□□□□□ -0.02
SNCA-209ENST00000506244 RNF128Q8TEB7 428 aa14.95□□□□□ -0.02
SNCA-209ENST00000506244 ZHX1-C8orf76Q96EF9 292 aa14.95□□□□□ -0.02
SNCA-209ENST00000506244 ECSITQ9BQ95 431 aa14.95□□□□□ -0.02
SNCA-209ENST00000506244 SLC39A3Q9BRY0 314 aa14.95□□□□□ -0.02
SNCA-209ENST00000506244 TACO1Q9BSH4 297 aaKnown RBP14.95□□□□□ -0.02
SNCA-209ENST00000506244 NANOGQ9H9S0 305 aa14.95□□□□□ -0.02
SNCA-209ENST00000506244 GP6Q9HCN6 339 aa14.95□□□□□ -0.02
SNCA-209ENST00000506244 JKAMPQ9P055 326 aa14.95□□□□□ -0.02
SNCA-209ENST00000506244 HDGFL3Q9Y3E1 203 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms