RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 GOLGA7Q7Z5G4 137 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 MRGPREQ86SM8 312 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 SATL1Q86VE3 508 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 CMTM1Q8IZ96 169 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 NATD1Q8N6N6 113 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 OR4F17Q8NGA8 305 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 OR4F5Q8NH21 305 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 DYDC1Q8WWB3 177 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 TSACCQ96A04 125 aaPredicted RBP4.64□□□□□ -1.67
NIPBL-204ENST00000504430 CSPG4P5Q96PW8 444 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 OR4F4Q96R69 305 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 TMEM79Q9BSE2 394 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 V9GYY9 64 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 NPIPB8E9PQR5 432 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 hCG_2039718K7EN88 272 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 FADS2O95864 444 aaKnown RBP4.63□□□□□ -1.67
NIPBL-204ENST00000504430 RAF1P04049 648 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 SP1P08047 785 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 NGFRP08138 427 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 SMIM10L1P0DMW3 83 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 MYL2P10916 166 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 ZP3P21754 424 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 GLRA1P23415 457 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 DTYMKP23919 212 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 RFX5P48382 616 aaPredicted RBP4.63□□□□□ -1.67
NIPBL-204ENST00000504430 SGSHP51688 502 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 PRELPP51888 382 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 CLDN12P56749 244 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 SPCS3P61009 180 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 ZNF33BQ06732 778 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 C2orf80Q0P641 193 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 ARL6IP1Q15041 203 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 VAMP3Q15836 100 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 IRAK1BP1Q5VVH5 260 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 ACSM5Q6NUN0 579 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.63□□□□□ -1.676e-8■■■■■ 50.5
NIPBL-204ENST00000504430 INO80EQ8NBZ0 244 aaPredicted RBP4.63□□□□□ -1.67
NIPBL-204ENST00000504430 LGALS14Q8TCE9 139 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 NEK7Q8TDX7 302 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 AP3S1Q92572 193 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 UPRTQ96BW1 309 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 SMIM10Q96HG1 83 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 CCDC42Q96M95 316 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 SLC25A19Q9HC21 320 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 PLCXD1Q9NUJ7 323 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 RMND1Q9NWS8 449 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 POLR3HQ9Y535 204 aaPredicted RBP4.63□□□□□ -1.67
NIPBL-204ENST00000504430 MYH14Q7Z406 1995 aaKnown RBP4.63□□□□□ -1.67
NIPBL-204ENST00000504430 ATP10AO60312 1499 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 GNG14A0A1W2PPG7 69 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 VSTM2BA6NLU5 285 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 SPINT2O43291 252 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 TSPAN2O60636 221 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 PSMG1O95456 288 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 ITGA2P17301 1181 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 OGDHQ02218 1023 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 ZP4Q12836 540 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 GRB14Q14449 540 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 IMPG1Q17R60 797 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 ISXQ2M1V0 245 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 GLYR1Q49A26 553 aaPredicted RBP4.63□□□□□ -1.67
NIPBL-204ENST00000504430 PTPN20Q4JDL3 420 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 EARS2Q5JPH6 523 aaKnown RBP4.63□□□□□ -1.67
NIPBL-204ENST00000504430 TEDDM1Q5T9Z0 273 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 FNDC7Q5VTL7 733 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 DMKNQ6E0U4 476 aaPredicted RBP4.63□□□□□ -1.67
NIPBL-204ENST00000504430 C11orf63Q6NUN7 778 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 FUT10Q6P4F1 479 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 MOB2Q70IA6 237 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 FCRLAQ7L513 359 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 OR10J5Q8NHC4 309 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 PLPPR1Q8TBJ4 325 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 ZNF398Q8TD17 642 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 PHF10Q8WUB8 498 aaKnown RBP4.63□□□□□ -1.67
NIPBL-204ENST00000504430 SLC35C1Q96A29 364 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 FAM89AQ96GI7 184 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 DGCR6LQ9BY27 220 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 LAT2Q9GZY6 243 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 RACGAP1Q9H0H5 632 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 SLC25A51Q9H1U9 297 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 PNRC2Q9NPJ4 139 aaKnown RBP4.63□□□□□ -1.67
NIPBL-204ENST00000504430 SERTAD4Q9NUC0 356 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 PPP1R3CQ9UQK1 317 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 FRG2CA6NGY1 282 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 UMODP07911 640 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 NUMBP49757 651 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 ELLP55199 621 aaPredicted RBP4.63□□□□□ -1.67
NIPBL-204ENST00000504430 MRPS6P82932 125 aaKnown RBP4.63□□□□□ -1.67
NIPBL-204ENST00000504430 CEACAM7Q14002 265 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 SLC25A52Q3SY17 297 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 ZNF776Q68DI1 518 aaPredicted RBP4.63□□□□□ -1.67
NIPBL-204ENST00000504430 C22orf42Q6IC83 251 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 PRR5LQ6MZQ0 368 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 SFTPA2Q8IWL1 248 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 MAGEE2Q8TD90 523 aaPredicted RBP4.63□□□□□ -1.67
NIPBL-204ENST00000504430 U2AF1L4Q8WU68 220 aaKnown RBP4.63□□□□□ -1.67
NIPBL-204ENST00000504430 TMEM239Q8WW34 195 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 DYRK2Q92630 601 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 DCUN1D5Q9BTE7 237 aa4.63□□□□□ -1.67
NIPBL-204ENST00000504430 UPF3AQ9H1J1 476 aaKnown RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms