RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 TMCO5AQ8N6Q1 288 aa13.76□□□□□ -0.21
PDLIM7-210ENST00000503827 RFWD2Q8NHY2 731 aa13.76□□□□□ -0.21
PDLIM7-210ENST00000503827 ZFP28Q8NHY6 868 aa13.76□□□□□ -0.21
PDLIM7-210ENST00000503827 UBASH3BQ8TF42 649 aa13.76□□□□□ -0.21
PDLIM7-210ENST00000503827 JADE3Q92613 823 aa13.76□□□□□ -0.21
PDLIM7-210ENST00000503827 TMEM186Q96B77 213 aa13.76□□□□□ -0.21
PDLIM7-210ENST00000503827 OTUB1Q96FW1 271 aaPredicted RBP13.76□□□□□ -0.21
PDLIM7-210ENST00000503827 ZNF382Q96SR6 550 aa13.76□□□□□ -0.21
PDLIM7-210ENST00000503827 ERP44Q9BS26 406 aa13.76□□□□□ -0.21
PDLIM7-210ENST00000503827 BTBD2Q9BX70 525 aa13.76□□□□□ -0.21
PDLIM7-210ENST00000503827 MRPL46Q9H2W6 279 aaKnown RBP13.76□□□□□ -0.21
PDLIM7-210ENST00000503827 GIN1Q9NXP7 522 aa13.76□□□□□ -0.21
PDLIM7-210ENST00000503827 CRYAAP02489 173 aa13.75□□□□□ -0.21
PDLIM7-210ENST00000503827 EPHA1P21709 976 aa13.75□□□□□ -0.21
PDLIM7-210ENST00000503827 NTF4P34130 210 aa13.75□□□□□ -0.21
PDLIM7-210ENST00000503827 SLC1A3P43003 542 aa13.75□□□□□ -0.21
PDLIM7-210ENST00000503827 KHKP50053 298 aa13.75□□□□□ -0.21
PDLIM7-210ENST00000503827 CCR4P51679 360 aa13.75□□□□□ -0.21
PDLIM7-210ENST00000503827 MRPS25P82663 173 aaKnown RBP13.75□□□□□ -0.21
PDLIM7-210ENST00000503827 FOXL1Q12952 345 aa13.75□□□□□ -0.21
PDLIM7-210ENST00000503827 RIN1Q13671 783 aa13.75□□□□□ -0.21
PDLIM7-210ENST00000503827 CBFBQ13951 182 aa13.75□□□□□ -0.21
PDLIM7-210ENST00000503827 NDUFAF6Q330K2 333 aa13.75□□□□□ -0.21
PDLIM7-210ENST00000503827 VHLLQ6RSH7 139 aa13.75□□□□□ -0.21
PDLIM7-210ENST00000503827 GAS2L3Q86XJ1 694 aa13.75□□□□□ -0.21
PDLIM7-210ENST00000503827 OR5W2Q8NH69 310 aa13.75□□□□□ -0.21
PDLIM7-210ENST00000503827 PIGXQ8TBF5 258 aa13.75□□□□□ -0.21
PDLIM7-210ENST00000503827 MRPL24Q96A35 216 aaKnown RBP13.75□□□□□ -0.21
PDLIM7-210ENST00000503827 ZNF524Q96C55 264 aa13.75□□□□□ -0.21
PDLIM7-210ENST00000503827 CHMP6Q96FZ7 201 aa13.75□□□□□ -0.21
PDLIM7-210ENST00000503827 C16orf58Q96GQ5 468 aa13.75□□□□□ -0.21
PDLIM7-210ENST00000503827 POLR3HQ9Y535 204 aaPredicted RBP13.75□□□□□ -0.21
PDLIM7-210ENST00000503827 SERTM1A2A2V5 107 aa13.74□□□□□ -0.21
PDLIM7-210ENST00000503827 ETV2O00321 342 aaPredicted RBP13.74□□□□□ -0.21
PDLIM7-210ENST00000503827 ZNF264O43296 627 aa13.74□□□□□ -0.21
PDLIM7-210ENST00000503827 EIF4E2O60573 245 aaKnown RBP13.74□□□□□ -0.21
PDLIM7-210ENST00000503827 ENO1P06733 434 aaKnown RBP13.74□□□□□ -0.21
PDLIM7-210ENST00000503827 PAFAH1B1P43034 410 aa13.74□□□□□ -0.21
PDLIM7-210ENST00000503827 IMPG1Q17R60 797 aa13.74□□□□□ -0.21
PDLIM7-210ENST00000503827 UNC50Q53HI1 259 aa13.74□□□□□ -0.21
PDLIM7-210ENST00000503827 SYT14P1Q58G82 188 aa13.74□□□□□ -0.21
PDLIM7-210ENST00000503827 CASP12Q6UXS9 341 aa13.74□□□□□ -0.21
PDLIM7-210ENST00000503827 ZNF614Q8N883 585 aa13.74□□□□□ -0.21
PDLIM7-210ENST00000503827 FAM76AQ8TAV0 307 aa13.74□□□□□ -0.21
PDLIM7-210ENST00000503827 KATNB1Q9BVA0 655 aa13.74□□□□□ -0.21
PDLIM7-210ENST00000503827 SUCNR1Q9BXA5 334 aa13.74□□□□□ -0.21
PDLIM7-210ENST00000503827 QRSL1Q9H0R6 528 aaKnown RBP13.74□□□□□ -0.21
PDLIM7-210ENST00000503827 PARPBPQ9NWS1 579 aa13.74□□□□□ -0.21
PDLIM7-210ENST00000503827 GRHL1Q9NZI5 618 aa13.74□□□□□ -0.21
PDLIM7-210ENST00000503827 STK38LQ9Y2H1 464 aa13.74□□□□□ -0.21
PDLIM7-210ENST00000503827 ZNF281Q9Y2X9 895 aa13.74□□□□□ -0.21
PDLIM7-210ENST00000503827 TIMM22Q9Y584 194 aa13.74□□□□□ -0.21
PDLIM7-210ENST00000503827 IGHV1-18A0A0C4DH31 117 aa13.73□□□□□ -0.21
PDLIM7-210ENST00000503827 FAM187AA6NFU0 413 aa13.73□□□□□ -0.21
PDLIM7-210ENST00000503827 VSTM5A8MXK1 200 aa13.73□□□□□ -0.21
PDLIM7-210ENST00000503827 MSMBP08118 114 aa13.73□□□□□ -0.21
PDLIM7-210ENST00000503827 TFPIP10646 304 aa13.73□□□□□ -0.21
PDLIM7-210ENST00000503827 MAGEA8P43361 318 aa13.73□□□□□ -0.21
PDLIM7-210ENST00000503827 SLC16A1P53985 500 aa13.73□□□□□ -0.21
PDLIM7-210ENST00000503827 ATP12AP54707 1039 aa13.73□□□□□ -0.21
PDLIM7-210ENST00000503827 PLTPP55058 493 aa13.73□□□□□ -0.21
PDLIM7-210ENST00000503827 GUCY2DQ02846 1103 aa13.73□□□□□ -0.21
PDLIM7-210ENST00000503827 ZNF678Q5SXM1 525 aa13.73□□□□□ -0.21
PDLIM7-210ENST00000503827 TEX35Q5T0J7 233 aa13.73□□□□□ -0.21
PDLIM7-210ENST00000503827 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.73□□□□□ -0.21
PDLIM7-210ENST00000503827 SLC25A43Q8WUT9 341 aaPredicted RBP13.73□□□□□ -0.21
PDLIM7-210ENST00000503827 CDS1Q92903 461 aa13.73□□□□□ -0.21
PDLIM7-210ENST00000503827 CIDECQ96AQ7 238 aaPredicted RBP13.73□□□□□ -0.21
PDLIM7-210ENST00000503827 SLC38A2Q96QD8 506 aa13.73□□□□□ -0.21
PDLIM7-210ENST00000503827 LRRC37BQ96QE4 947 aa13.73□□□□□ -0.21
PDLIM7-210ENST00000503827 STACQ99469 402 aa13.73□□□□□ -0.21
PDLIM7-210ENST00000503827 LPAR2Q9HBW0 351 aa13.73□□□□□ -0.21
PDLIM7-210ENST00000503827 OBP2BQ9NPH6 170 aa13.73□□□□□ -0.21
PDLIM7-210ENST00000503827 DUSP22Q9NRW4 184 aa13.73□□□□□ -0.21
PDLIM7-210ENST00000503827 SLC7A10Q9NS82 523 aa13.73□□□□□ -0.21
PDLIM7-210ENST00000503827 DTNAQ9Y4J8 743 aa13.73□□□□□ -0.21
PDLIM7-210ENST00000503827 hCG_2039718K7EN88 272 aa13.72□□□□□ -0.21
PDLIM7-210ENST00000503827 KLF11O14901 512 aa13.72□□□□□ -0.21
PDLIM7-210ENST00000503827 SBK3P0C264 359 aa13.72□□□□□ -0.21
PDLIM7-210ENST00000503827 UBL4AP11441 157 aa13.72□□□□□ -0.21
PDLIM7-210ENST00000503827 PAX7P23759 505 aa13.72□□□□□ -0.21
PDLIM7-210ENST00000503827 MPGP29372 298 aa13.72□□□□□ -0.21
PDLIM7-210ENST00000503827 MAGEA12P43365 314 aa13.72□□□□□ -0.21
PDLIM7-210ENST00000503827 PKNOX1P55347 436 aa13.72□□□□□ -0.21
PDLIM7-210ENST00000503827 CAV1Q03135 178 aa13.72□□□□□ -0.21
PDLIM7-210ENST00000503827 MERTKQ12866 999 aa13.72□□□□□ -0.21
PDLIM7-210ENST00000503827 ANKRD26P1Q6NSI1 321 aa13.72□□□□□ -0.21
PDLIM7-210ENST00000503827 NOXRED1Q6NXP6 359 aa13.72□□□□□ -0.21
PDLIM7-210ENST00000503827 CDC73Q6P1J9 531 aa13.72□□□□□ -0.21
PDLIM7-210ENST00000503827 FAHD2BQ6P2I3 314 aaPredicted RBP13.72□□□□□ -0.21
PDLIM7-210ENST00000503827 ZCCHC24Q8N2G6 241 aaKnown RBP13.72□□□□□ -0.21
PDLIM7-210ENST00000503827 TMEM234Q8WY98 164 aa13.72□□□□□ -0.21
PDLIM7-210ENST00000503827 ST8SIA1Q92185 356 aa13.72□□□□□ -0.21
PDLIM7-210ENST00000503827 FAHD2AQ96GK7 314 aa13.72□□□□□ -0.21
PDLIM7-210ENST00000503827 EGLN2Q96KS0 407 aa13.72□□□□□ -0.21
PDLIM7-210ENST00000503827 PIGUQ9H490 435 aa13.72□□□□□ -0.21
PDLIM7-210ENST00000503827 DYNLRB1Q9NP97 96 aa13.72□□□□□ -0.21
PDLIM7-210ENST00000503827 SPIN1Q9Y657 262 aaPredicted RBP13.72□□□□□ -0.21
PDLIM7-210ENST00000503827 TRRAPQ9Y4A5 3859 aa13.71□□□□□ -0.21
PDLIM7-210ENST00000503827 ESPNB1AK53 854 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms