RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 ACTC1P68032 377 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 ACTA1P68133 377 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 PJVKQ0ZLH3 352 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 MGAT2Q10469 447 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 GPR176Q14439 515 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 C3orf36Q3SXR2 165 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 PAGE3Q5JUK9 113 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 BCL2L15Q5TBC7 163 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 ANGPTL5Q86XS5 388 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 LAX1Q8IWV1 398 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 LMNTD1Q8N9Z9 388 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 SLC24A4Q8NFF2 622 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 OR4M2Q8NGB6 313 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 AKR7LQ8NHP1 331 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 SLC2A12Q8TD20 617 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 NETO1Q8TDF5 533 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 ASB11Q8WXH4 323 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 EXOSC8Q96B26 276 aaKnown RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 CMBLQ96DG6 245 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 THAP7Q9BT49 309 aaPredicted RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 CNPPD1Q9BV87 410 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 ENKD1Q9H0I2 346 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 POLR3FQ9H1D9 316 aaPredicted RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 OSGEPL1Q9H4B0 414 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 GALNT9Q9HCQ5 603 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 MYNNQ9NPC7 610 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 TRIM36Q9NQ86 728 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 TEX10Q9NXF1 929 aaPredicted RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 FBXL4Q9UKA2 621 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 ZDHHC8Q9ULC8 765 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 FNDC3AQ9Y2H6 1198 aaKnown RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 CENPEQ02224 2701 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 LOC105369274A0A096LPK9 316 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 A0A1W2PQF6 199 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 LNP1A1A4G5 178 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 TMEM200CA6NKL6 621 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 ZAR1LA6NP61 321 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 A8MV72 311 aaPredicted RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 H7C4K7 107 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 UBE2CO00762 179 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 MID1O15344 667 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 CIDEAO60543 219 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 GOSR1O95249 250 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 MT-ND5P03915 603 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 PET100P0DJ07 73 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 BPIP17213 487 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 CD1CP29017 333 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 CRABP1P29762 137 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 TRHRP34981 398 aaPredicted RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 PCGF2P35227 344 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 DRD3P35462 400 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 PCP4P48539 62 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 MMP15P51511 669 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 EPHB3P54753 998 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 REEP5Q00765 189 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 HTR4Q13639 388 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 CR1LQ2VPA4 569 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 ABLIM2Q6H8Q1 611 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 FIGNL1Q6PIW4 674 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 UBE2R2Q712K3 238 aaPredicted RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 ZNF227Q86WZ6 799 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 OR4N4Q8N0Y3 316 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 GTPBP8Q8N3Z3 284 aaPredicted RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 ACBD7Q8N6N7 88 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 NANOGP1Q8N7R0 232 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 RNF152Q8N8N0 203 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 SYT14Q8NB59 555 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 INO80EQ8NBZ0 244 aaPredicted RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 NLGN4YQ8NFZ3 816 aaPredicted RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 OR9A4Q8NGU2 314 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 TAAR8Q969N4 342 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 ATXN7L3BQ96GX2 97 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 C1orf159Q96HA4 380 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 LOXL4Q96JB6 756 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 NOL4LQ96MY1 436 aaPredicted RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 LRRC3BQ96PB8 259 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 IL4I1Q96RQ9 567 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 TBL1YQ9BQ87 522 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 AARSD1Q9BTE6 412 aaKnown RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 SLAMF7Q9NQ25 335 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 ZNF302Q9NR11 478 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 COQ3Q9NZJ6 369 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 PTGFRNQ9P2B2 879 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 ING1Q9UK53 422 aaPredicted RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 CLCA2Q9UQC9 943 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 LSM2Q9Y333 95 aaKnown RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 PRUNE2Q8WUY3 3088 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 ACOD1A6NK06 481 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 G3V3G9 751 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 GABARAPH6UMI1 98 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 H7C1Q1 480 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 TLR4O00206 839 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 TREHO43280 583 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 GSTZ1O43708 216 aaPredicted RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 KDELR3O43731 214 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 CDC123O75794 336 aaPredicted RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 EPPINO95925 133 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 CLTBP09497 229 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 METTL15P1P0C7V9 234 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 RNH1P13489 461 aaKnown RBP2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms