RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 RPUSD3Q6P087 351 aaKnown RBP18.48■□□□□ 0.55
CDC42SE2-206ENST00000503291 ATG4DQ86TL0 474 aaPredicted RBP18.48■□□□□ 0.55
CDC42SE2-206ENST00000503291 YRDCQ86U90 279 aaKnown RBP18.48■□□□□ 0.55
CDC42SE2-206ENST00000503291 PQLC1Q8N2U9 271 aa18.48■□□□□ 0.55
CDC42SE2-206ENST00000503291 FAM83FQ8NEG4 500 aaPredicted RBP18.48■□□□□ 0.55
CDC42SE2-206ENST00000503291 OR5M1Q8NGP8 315 aa18.48■□□□□ 0.55
CDC42SE2-206ENST00000503291 POC1BQ8TC44 478 aa18.48■□□□□ 0.55
CDC42SE2-206ENST00000503291 SLC38A4Q969I6 547 aa18.48■□□□□ 0.55
CDC42SE2-206ENST00000503291 PNPLA2Q96AD5 504 aa18.48■□□□□ 0.55
CDC42SE2-206ENST00000503291 DTNBP1Q96EV8 351 aa18.48■□□□□ 0.55
CDC42SE2-206ENST00000503291 MRGPRX4Q96LA9 322 aa18.48■□□□□ 0.55
CDC42SE2-206ENST00000503291 BDH2Q9BUT1 245 aa18.48■□□□□ 0.55
CDC42SE2-206ENST00000503291 SLC25A18Q9H1K4 315 aa18.48■□□□□ 0.55
CDC42SE2-206ENST00000503291 REEP1Q9H902 201 aa18.48■□□□□ 0.55
CDC42SE2-206ENST00000503291 OSGIN1Q9UJX0 560 aa18.48■□□□□ 0.55
CDC42SE2-206ENST00000503291 A0A1W2PRQ8 180 aa18.47■□□□□ 0.55
CDC42SE2-206ENST00000503291 NTN1O95631 604 aa18.47■□□□□ 0.55
CDC42SE2-206ENST00000503291 EIF1P41567 113 aaKnown RBP18.47■□□□□ 0.55
CDC42SE2-206ENST00000503291 HTR3AP46098 478 aa18.47■□□□□ 0.55
CDC42SE2-206ENST00000503291 IST1P53990 364 aa18.47■□□□□ 0.55
CDC42SE2-206ENST00000503291 SMIM11AP58511 58 aa18.47■□□□□ 0.55
CDC42SE2-206ENST00000503291 RIPK1Q13546 671 aa18.47■□□□□ 0.55
CDC42SE2-206ENST00000503291 DGCR6Q14129 220 aa18.47■□□□□ 0.55
CDC42SE2-206ENST00000503291 TRAM2Q15035 370 aa18.47■□□□□ 0.55
CDC42SE2-206ENST00000503291 SWT1Q5T5J6 900 aaKnown RBP18.47■□□□□ 0.55
CDC42SE2-206ENST00000503291 POMZP3Q6PJE2 187 aa18.47■□□□□ 0.55
CDC42SE2-206ENST00000503291 NKAIN4Q8IVV8 208 aa18.47■□□□□ 0.55
CDC42SE2-206ENST00000503291 OR14L1PQ8NHC6 308 aa18.47■□□□□ 0.55
CDC42SE2-206ENST00000503291 CENPNQ96H22 339 aaPredicted RBP18.47■□□□□ 0.55
CDC42SE2-206ENST00000503291 TAAR6Q96RI8 345 aa18.47■□□□□ 0.55
CDC42SE2-206ENST00000503291 PRSS27Q9BQR3 290 aa18.47■□□□□ 0.55
CDC42SE2-206ENST00000503291 SAMHD1Q9Y3Z3 626 aaKnown RBP18.47■□□□□ 0.55
CDC42SE2-206ENST00000503291 LYVE1Q9Y5Y7 322 aa18.47■□□□□ 0.55
CDC42SE2-206ENST00000503291 ERVH48-1M5A8F1 160 aa18.47■□□□□ 0.55
CDC42SE2-206ENST00000503291 TNFRSF11BO00300 401 aa18.47■□□□□ 0.55
CDC42SE2-206ENST00000503291 HPNP05981 417 aa18.47■□□□□ 0.55
CDC42SE2-206ENST00000503291 CELA3AP09093 270 aa18.47■□□□□ 0.55
CDC42SE2-206ENST00000503291 POLR2HP52434 150 aaKnown RBP18.47■□□□□ 0.55
CDC42SE2-206ENST00000503291 HMGA2P52926 109 aa18.47■□□□□ 0.55
CDC42SE2-206ENST00000503291 GLYR1Q49A26 553 aaPredicted RBP18.47■□□□□ 0.55
CDC42SE2-206ENST00000503291 FGD3Q5JSP0 725 aa18.47■□□□□ 0.55
CDC42SE2-206ENST00000503291 WDR88Q6ZMY6 472 aa18.47■□□□□ 0.55
CDC42SE2-206ENST00000503291 ADGRG3Q86Y34 549 aa18.47■□□□□ 0.55
CDC42SE2-206ENST00000503291 FAM109AQ8N4B1 249 aa18.47■□□□□ 0.55
CDC42SE2-206ENST00000503291 SLC7A13Q8TCU3 470 aa18.47■□□□□ 0.55
CDC42SE2-206ENST00000503291 OR2B2Q9GZK3 357 aa18.47■□□□□ 0.55
CDC42SE2-206ENST00000503291 QPCTLQ9NXS2 382 aa18.47■□□□□ 0.55
CDC42SE2-206ENST00000503291 STX18Q9P2W9 335 aaKnown RBP18.47■□□□□ 0.55
CDC42SE2-206ENST00000503291 PRRC2CQ9Y520 2896 aaKnown RBP18.47■□□□□ 0.55
CDC42SE2-206ENST00000503291 TRBV4-1A0A0J9YWV2 114 aa18.46■□□□□ 0.55
CDC42SE2-206ENST00000503291 PNMTP11086 282 aa18.46■□□□□ 0.55
CDC42SE2-206ENST00000503291 SFTPCP11686 197 aa18.46■□□□□ 0.55
CDC42SE2-206ENST00000503291 ZNF24P17028 368 aa18.46■□□□□ 0.55
CDC42SE2-206ENST00000503291 ADH6P28332 368 aa18.46■□□□□ 0.55
CDC42SE2-206ENST00000503291 TMEM44Q2T9K0 475 aa18.46■□□□□ 0.55
CDC42SE2-206ENST00000503291 WIPI1Q5MNZ9 446 aaPredicted RBP18.46■□□□□ 0.55
CDC42SE2-206ENST00000503291 RAET1LQ5VY80 246 aa18.46■□□□□ 0.55
CDC42SE2-206ENST00000503291 LINC00114Q6XXX2 140 aa18.46■□□□□ 0.55
CDC42SE2-206ENST00000503291 GTPBP8Q8N3Z3 284 aaPredicted RBP18.46■□□□□ 0.55
CDC42SE2-206ENST00000503291 TEX19Q8NA77 164 aa18.46■□□□□ 0.55
CDC42SE2-206ENST00000503291 UBL7Q96S82 380 aaPredicted RBP18.46■□□□□ 0.55
CDC42SE2-206ENST00000503291 ANKRD19PQ9H560 264 aa18.46■□□□□ 0.55
CDC42SE2-206ENST00000503291 C12orf10Q9HB07 376 aa18.46■□□□□ 0.55
CDC42SE2-206ENST00000503291 NKX1-2Q9UD57 310 aaPredicted RBP18.46■□□□□ 0.55
CDC42SE2-206ENST00000503291 A0A087WUJ7 227 aa18.45■□□□□ 0.54
CDC42SE2-206ENST00000503291 C7orf72A4D263 438 aa18.45■□□□□ 0.54
CDC42SE2-206ENST00000503291 ELOA3DA6NLF2 546 aaPredicted RBP18.45■□□□□ 0.54
CDC42SE2-206ENST00000503291 CCNA2P20248 432 aa18.45■□□□□ 0.54
CDC42SE2-206ENST00000503291 CXCR1P25024 350 aa18.45■□□□□ 0.54
CDC42SE2-206ENST00000503291 APOBEC1P41238 236 aaKnown RBP18.45■□□□□ 0.54
CDC42SE2-206ENST00000503291 LIMS1P48059 325 aa18.45■□□□□ 0.54
CDC42SE2-206ENST00000503291 SLC10A1Q14973 349 aa18.45■□□□□ 0.54
CDC42SE2-206ENST00000503291 ELOA3BQ3SY89 546 aa18.45■□□□□ 0.54
CDC42SE2-206ENST00000503291 ELOA3Q8NG57 546 aa18.45■□□□□ 0.54
CDC42SE2-206ENST00000503291 MPP4Q96JB8 637 aa18.45■□□□□ 0.54
CDC42SE2-206ENST00000503291 ALPK1Q96QP1 1244 aa18.45■□□□□ 0.54
CDC42SE2-206ENST00000503291 RNPEPL1Q9HAU8 725 aa18.45■□□□□ 0.54
CDC42SE2-206ENST00000503291 C6orf203Q9P0P8 240 aaPredicted RBP18.45■□□□□ 0.54
CDC42SE2-206ENST00000503291 TMED7-TICAM2A0A0A6YYA0 188 aa18.45■□□□□ 0.54
CDC42SE2-206ENST00000503291 OR2M5A3KFT3 312 aa18.45■□□□□ 0.54
CDC42SE2-206ENST00000503291 EFNA2O43921 213 aa18.45■□□□□ 0.54
CDC42SE2-206ENST00000503291 E2F6O75461 281 aa18.45■□□□□ 0.54
CDC42SE2-206ENST00000503291 LY6DQ14210 128 aa18.45■□□□□ 0.54
CDC42SE2-206ENST00000503291 EXOC3L2Q2M3D2 409 aa18.45■□□□□ 0.54
CDC42SE2-206ENST00000503291 DCST1Q5T197 706 aa18.45■□□□□ 0.54
CDC42SE2-206ENST00000503291 PCSK4Q6UW60 755 aa18.45■□□□□ 0.54
CDC42SE2-206ENST00000503291 TMEM179BQ7Z7N9 219 aa18.45■□□□□ 0.54
CDC42SE2-206ENST00000503291 Q8NA96 180 aa18.45■□□□□ 0.54
CDC42SE2-206ENST00000503291 OR4C15Q8NGM1 316 aa18.45■□□□□ 0.54
CDC42SE2-206ENST00000503291 TMEM255BQ8WV15 326 aa18.45■□□□□ 0.54
CDC42SE2-206ENST00000503291 EPYCQ99645 322 aa18.45■□□□□ 0.54
CDC42SE2-206ENST00000503291 PIGQQ9BRB3 760 aa18.45■□□□□ 0.54
CDC42SE2-206ENST00000503291 FUZQ9BT04 418 aa18.45■□□□□ 0.54
CDC42SE2-206ENST00000503291 DEFB127Q9H1M4 99 aa18.45■□□□□ 0.54
CDC42SE2-206ENST00000503291 ZDHHC11Q9H8X9 412 aa18.45■□□□□ 0.54
CDC42SE2-206ENST00000503291 ACKR4Q9NPB9 350 aa18.45■□□□□ 0.54
CDC42SE2-206ENST00000503291 TMED7Q9Y3B3 224 aa18.45■□□□□ 0.54
CDC42SE2-206ENST00000503291 TLN1Q9Y490 2541 aaKnown RBP18.45■□□□□ 0.54
CDC42SE2-206ENST00000503291 TFECO14948 347 aaPredicted RBP18.44■□□□□ 0.54
CDC42SE2-206ENST00000503291 ATP6V1G2O95670 118 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms