RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 PRSS27Q9BQR3 290 aa10.69□□□□□ -0.7
USP46-204ENST00000503060 CHRNA10Q9GZZ6 450 aa10.69□□□□□ -0.7
USP46-204ENST00000503060 DCSTAMPQ9H295 470 aa10.69□□□□□ -0.7
USP46-204ENST00000503060 ARMC7Q9H6L4 198 aa10.69□□□□□ -0.7
USP46-204ENST00000503060 TBC1D17Q9HA65 648 aa10.69□□□□□ -0.7
USP46-204ENST00000503060 TBC1D23Q9NUY8 699 aa10.69□□□□□ -0.7
USP46-204ENST00000503060 OSGIN1Q9UJX0 560 aa10.69□□□□□ -0.7
USP46-204ENST00000503060 CLDN16Q9Y5I7 305 aa10.69□□□□□ -0.7
USP46-204ENST00000503060 RHPN2P1A8MT19 583 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 CLDN4O14493 209 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 LYPD3O95274 346 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 GNSP15586 552 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 TMED10P49755 219 aaKnown RBP10.68□□□□□ -0.7
USP46-204ENST00000503060 EPHA4P54764 986 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 BTG2P78543 158 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 PSG6Q00889 435 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 DOC2BQ14184 412 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 OR1Q1Q15612 314 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 ZNHIT3Q15649 155 aaPredicted RBP10.68□□□□□ -0.7
USP46-204ENST00000503060 TSTQ16762 297 aaKnown RBP10.68□□□□□ -0.7
USP46-204ENST00000503060 FLYWCH1Q4VC44 716 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 RNLSQ5VYX0 342 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 ZC3H14Q6PJT7 736 aaKnown RBP10.68□□□□□ -0.7
USP46-204ENST00000503060 METTL27Q8N6F8 245 aaPredicted RBP10.68□□□□□ -0.7
USP46-204ENST00000503060 OSTF1Q92882 214 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 SPACA9Q96E40 222 aaPredicted RBP10.68□□□□□ -0.7
USP46-204ENST00000503060 MMABQ96EY8 250 aaPredicted RBP10.68□□□□□ -0.7
USP46-204ENST00000503060 ZDHHC12Q96GR4 267 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 PLEKHA8Q96JA3 519 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 DGAT2Q96PD7 388 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 SLC38A2Q96QD8 506 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 CD180Q99467 661 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 SPXQ9BT56 116 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 SPRTNQ9H040 489 aaPredicted RBP10.68□□□□□ -0.7
USP46-204ENST00000503060 RAB33BQ9H082 229 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 OR51E2Q9H255 320 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.68□□□□□ -0.7
USP46-204ENST00000503060 NLGN3Q9NZ94 848 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 CLEC2DQ9UHP7 191 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 ERGIC3Q9Y282 383 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 LSM2Q9Y333 95 aaKnown RBP10.68□□□□□ -0.7
USP46-204ENST00000503060 CORINQ9Y5Q5 1042 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 RNF215Q9Y6U7 377 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 THADAQ6YHU6 1953 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 A0A1B0GTQ1 180 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 J3QRK9 145 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 HRKO00198 91 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 OPN1LWP04000 364 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 GUSBP08236 651 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 SSTR4P31391 388 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 RFX3P48380 749 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 PLAURQ03405 335 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 CLEC12AQ5QGZ9 265 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 SAPCD1Q5SSQ6 148 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 C19orf48Q6RUI8 117 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 MAML2Q8IZL2 1156 aaPredicted RBP10.68□□□□□ -0.7
USP46-204ENST00000503060 SLC34A3Q8N130 599 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 OR4Q3Q8NH05 313 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 CLDN23Q96B33 292 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 HSPBAP1Q96EW2 488 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 VSTM2LQ96N03 204 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 PRRG3Q9BZD7 231 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 GPR61Q9BZJ8 451 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 ZBTB20Q9HC78 741 aaPredicted RBP10.68□□□□□ -0.7
USP46-204ENST00000503060 KRCC1Q9NPI7 259 aaPredicted RBP10.68□□□□□ -0.7
USP46-204ENST00000503060 TESQ9UGI8 421 aaKnown RBP10.68□□□□□ -0.7
USP46-204ENST00000503060 KLHL3Q9UH77 587 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 DTX4Q9Y2E6 619 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 TRIOBPQ9H2D6 2365 aa10.68□□□□□ -0.7
USP46-204ENST00000503060 A0A0U1RQK1 487 aa10.67□□□□□ -0.7
USP46-204ENST00000503060 A0A1W2PPC1 479 aa10.67□□□□□ -0.7
USP46-204ENST00000503060 ZNF320A2RRD8 509 aa10.67□□□□□ -0.7
USP46-204ENST00000503060 FITM1A5D6W6 292 aa10.67□□□□□ -0.7
USP46-204ENST00000503060 PRODHO43272 600 aa10.67□□□□□ -0.7
USP46-204ENST00000503060 CSO75390 466 aaKnown RBP10.67□□□□□ -0.7
USP46-204ENST00000503060 ZNF267Q14586 743 aaPredicted RBP10.67□□□□□ -0.7
USP46-204ENST00000503060 ZNF846Q147U1 533 aa10.67□□□□□ -0.7
USP46-204ENST00000503060 WDR88Q6ZMY6 472 aa10.67□□□□□ -0.7
USP46-204ENST00000503060 ZNF620Q6ZNG0 422 aa10.67□□□□□ -0.7
USP46-204ENST00000503060 USP43Q70EL4 1123 aa10.67□□□□□ -0.7
USP46-204ENST00000503060 PM20D2Q8IYS1 436 aa10.67□□□□□ -0.7
USP46-204ENST00000503060 OR4N2Q8NGD1 307 aa10.67□□□□□ -0.7
USP46-204ENST00000503060 OR52I1Q8NGK6 324 aa10.67□□□□□ -0.7
USP46-204ENST00000503060 FNDC8Q8TC99 324 aa10.67□□□□□ -0.7
USP46-204ENST00000503060 DNASE2BQ8WZ79 361 aa10.67□□□□□ -0.7
USP46-204ENST00000503060 DMRTB1Q96MA1 342 aa10.67□□□□□ -0.7
USP46-204ENST00000503060 LMF1Q96S06 567 aa10.67□□□□□ -0.7
USP46-204ENST00000503060 MND1Q9BWT6 205 aa10.67□□□□□ -0.7
USP46-204ENST00000503060 MRPL37Q9BZE1 423 aaKnown RBP10.67□□□□□ -0.7
USP46-204ENST00000503060 SLIRPQ9GZT3 109 aaKnown RBP10.67□□□□□ -0.7
USP46-204ENST00000503060 EVA1AQ9H8M9 152 aa10.67□□□□□ -0.7
USP46-204ENST00000503060 PALMDQ9NP74 551 aa10.67□□□□□ -0.7
USP46-204ENST00000503060 AKIP1Q9NQ31 210 aa10.67□□□□□ -0.7
USP46-204ENST00000503060 TOR4AQ9NXH8 423 aa10.67□□□□□ -0.7
USP46-204ENST00000503060 LRIT1Q9P2V4 623 aa10.67□□□□□ -0.7
USP46-204ENST00000503060 ZNF223Q9UK11 482 aaPredicted RBP10.67□□□□□ -0.7
USP46-204ENST00000503060 DIMT1Q9UNQ2 313 aaKnown RBP10.67□□□□□ -0.7
USP46-204ENST00000503060 TMEM184BQ9Y519 407 aaPredicted RBP10.67□□□□□ -0.7
USP46-204ENST00000503060 CDH10Q9Y6N8 788 aa10.67□□□□□ -0.7
USP46-204ENST00000503060 ABCA7Q8IZY2 2146 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms