RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 RND1Q92730 232 aa22.59■■□□□ 1.21
LSM6-202ENST00000502781 NSL1Q96IY1 281 aa22.59■■□□□ 1.21
LSM6-202ENST00000502781 KLHL15Q96M94 604 aa22.59■■□□□ 1.21
LSM6-202ENST00000502781 TRIB1Q96RU8 372 aa22.59■■□□□ 1.21
LSM6-202ENST00000502781 EVA1AQ9H8M9 152 aa22.59■■□□□ 1.21
LSM6-202ENST00000502781 A0A0J9YW62 118 aa22.58■■□□□ 1.21
LSM6-202ENST00000502781 LGI1O95970 557 aa22.58■■□□□ 1.21
LSM6-202ENST00000502781 CEACAM8P31997 349 aaPredicted RBP22.58■■□□□ 1.21
LSM6-202ENST00000502781 RIPPLY2Q5TAB7 128 aa22.58■■□□□ 1.21
LSM6-202ENST00000502781 C3orf33Q6P1S2 294 aa22.58■■□□□ 1.21
LSM6-202ENST00000502781 ADGRG3Q86Y34 549 aa22.58■■□□□ 1.21
LSM6-202ENST00000502781 WFDC6Q9BQY6 131 aa22.58■■□□□ 1.21
LSM6-202ENST00000502781 CTPS2Q9NRF8 586 aa22.58■■□□□ 1.21
LSM6-202ENST00000502781 OSGIN1Q9UJX0 560 aa22.58■■□□□ 1.21
LSM6-202ENST00000502781 USP9YO00507 2555 aaPredicted RBP22.58■■□□□ 1.2
LSM6-202ENST00000502781 EIF1AYO14602 144 aaKnown RBP22.57■■□□□ 1.2
LSM6-202ENST00000502781 OPN1LWP04000 364 aa22.57■■□□□ 1.2
LSM6-202ENST00000502781 KDELR2P33947 212 aa22.57■■□□□ 1.2
LSM6-202ENST00000502781 CPOXP36551 454 aa22.57■■□□□ 1.2
LSM6-202ENST00000502781 SMSP52788 366 aa22.57■■□□□ 1.2
LSM6-202ENST00000502781 RPS3AP61247 264 aaKnown RBP22.57■■□□□ 1.2
LSM6-202ENST00000502781 SLC25A3Q00325 362 aa22.57■■□□□ 1.2
LSM6-202ENST00000502781 NRF1Q16656 503 aa22.57■■□□□ 1.2
LSM6-202ENST00000502781 WBP2NLQ6ICG8 309 aa22.57■■□□□ 1.2
LSM6-202ENST00000502781 TRPM8Q7Z2W7 1104 aa22.57■■□□□ 1.2
LSM6-202ENST00000502781 ZNF808Q8N4W9 903 aaPredicted RBP22.57■■□□□ 1.2
LSM6-202ENST00000502781 RASSF5Q8WWW0 418 aa22.57■■□□□ 1.2
LSM6-202ENST00000502781 WNT2BQ93097 391 aa22.57■■□□□ 1.2
LSM6-202ENST00000502781 NDE1Q9NXR1 346 aa22.57■■□□□ 1.2
LSM6-202ENST00000502781 KLHL28Q9NXS3 571 aa22.57■■□□□ 1.2
LSM6-202ENST00000502781 CHRNA9Q9UGM1 479 aa22.57■■□□□ 1.2
LSM6-202ENST00000502781 DOPEY2Q9Y3R5 2298 aa22.56■■□□□ 1.2
LSM6-202ENST00000502781 GJE1A6NN92 205 aa22.56■■□□□ 1.2
LSM6-202ENST00000502781 TMEM229AB2RXF0 380 aa22.56■■□□□ 1.2
LSM6-202ENST00000502781 TACR3P29371 465 aa22.56■■□□□ 1.2
LSM6-202ENST00000502781 COPZ1P61923 177 aa22.56■■□□□ 1.2
LSM6-202ENST00000502781 HOXC5Q00444 222 aa22.56■■□□□ 1.2
LSM6-202ENST00000502781 TMEM176BQ3YBM2 270 aaPredicted RBP22.56■■□□□ 1.2
LSM6-202ENST00000502781 XKRXQ6PP77 449 aa22.56■■□□□ 1.2
LSM6-202ENST00000502781 MRGPRGQ86SM5 289 aa22.56■■□□□ 1.2
LSM6-202ENST00000502781 LSMEM1Q8N8F7 131 aa22.56■■□□□ 1.2
LSM6-202ENST00000502781 OR10D3Q8NH80 312 aa22.56■■□□□ 1.2
LSM6-202ENST00000502781 OR2V1Q8NHB1 315 aa22.56■■□□□ 1.2
LSM6-202ENST00000502781 SLC25A43Q8WUT9 341 aaPredicted RBP22.56■■□□□ 1.2
LSM6-202ENST00000502781 ZNF845Q96IR2 970 aaPredicted RBP22.56■■□□□ 1.2
LSM6-202ENST00000502781 ARHGDIGQ99819 225 aa22.56■■□□□ 1.2
LSM6-202ENST00000502781 COQ10BQ9H8M1 238 aa22.56■■□□□ 1.2
LSM6-202ENST00000502781 SERINC1Q9NRX5 453 aa22.56■■□□□ 1.2
LSM6-202ENST00000502781 PAQR5Q9NXK6 330 aaPredicted RBP22.56■■□□□ 1.2
LSM6-202ENST00000502781 ZNF175Q9Y473 711 aa22.56■■□□□ 1.2
LSM6-202ENST00000502781 A0A0G2JNJ9 132 aa22.55■■□□□ 1.2
LSM6-202ENST00000502781 CALB2P22676 271 aa22.55■■□□□ 1.2
LSM6-202ENST00000502781 FKBP2P26885 142 aaKnown RBP22.55■■□□□ 1.2
LSM6-202ENST00000502781 SFTPDP35247 375 aa22.55■■□□□ 1.2
LSM6-202ENST00000502781 POLR2HP52434 150 aaKnown RBP22.55■■□□□ 1.2
LSM6-202ENST00000502781 MAP2K6P52564 334 aa22.55■■□□□ 1.2
LSM6-202ENST00000502781 C9orf106Q8NAJ2 232 aa22.55■■□□□ 1.2
LSM6-202ENST00000502781 TNIP2Q8NFZ5 429 aa22.55■■□□□ 1.2
LSM6-202ENST00000502781 SLC26A7Q8TE54 656 aa22.55■■□□□ 1.2
LSM6-202ENST00000502781 Q9UFV3 132 aa22.55■■□□□ 1.2
LSM6-202ENST00000502781 TESQ9UGI8 421 aaKnown RBP22.55■■□□□ 1.2
LSM6-202ENST00000502781 RNF6Q9Y252 685 aa22.55■■□□□ 1.2
LSM6-202ENST00000502781 KIAA1549Q9HCM3 1950 aa22.54■■□□□ 1.2
LSM6-202ENST00000502781 TMED7-TICAM2A0A0A6YYA0 188 aa22.54■■□□□ 1.2
LSM6-202ENST00000502781 TNFSF11O14788 317 aa22.54■■□□□ 1.2
LSM6-202ENST00000502781 TPST2O60704 377 aa22.54■■□□□ 1.2
LSM6-202ENST00000502781 TGM6O95932 706 aa22.54■■□□□ 1.2
LSM6-202ENST00000502781 IFNA14P01570 189 aa22.54■■□□□ 1.2
LSM6-202ENST00000502781 FESP07332 822 aa22.54■■□□□ 1.2
LSM6-202ENST00000502781 HTR2AP28223 471 aa22.54■■□□□ 1.2
LSM6-202ENST00000502781 RGS8P57771 180 aaPredicted RBP22.54■■□□□ 1.2
LSM6-202ENST00000502781 FXNQ16595 210 aa22.54■■□□□ 1.2
LSM6-202ENST00000502781 SYT14P1Q58G82 188 aa22.54■■□□□ 1.2
LSM6-202ENST00000502781 HBMQ6B0K9 141 aa22.54■■□□□ 1.2
LSM6-202ENST00000502781 PLXDC2Q6UX71 529 aa22.54■■□□□ 1.2
LSM6-202ENST00000502781 C16orf89Q6UX73 402 aa22.54■■□□□ 1.2
LSM6-202ENST00000502781 CHMP1BQ7LBR1 199 aa22.54■■□□□ 1.2
LSM6-202ENST00000502781 NAXEQ8NCW5 288 aa22.54■■□□□ 1.2
LSM6-202ENST00000502781 RBM15BQ8NDT2 890 aaKnown RBP22.54■■□□□ 1.2
LSM6-202ENST00000502781 C3orf49Q96BT1 292 aa22.54■■□□□ 1.2
LSM6-202ENST00000502781 KCTD14Q9BQ13 255 aaPredicted RBP22.54■■□□□ 1.2
LSM6-202ENST00000502781 ADA2Q9NZK5 511 aa22.54■■□□□ 1.2
LSM6-202ENST00000502781 CD300AQ9UGN4 299 aa22.54■■□□□ 1.2
LSM6-202ENST00000502781 SLC13A4Q9UKG4 626 aa22.54■■□□□ 1.2
LSM6-202ENST00000502781 TMED7Q9Y3B3 224 aa22.54■■□□□ 1.2
LSM6-202ENST00000502781 SPIN1Q9Y657 262 aaPredicted RBP22.54■■□□□ 1.2
LSM6-202ENST00000502781 B2RBV5 119 aa22.53■■□□□ 1.2
LSM6-202ENST00000502781 CXCR6O00574 342 aa22.53■■□□□ 1.2
LSM6-202ENST00000502781 ZNF208O43345 1280 aa22.53■■□□□ 1.2
LSM6-202ENST00000502781 CXCL13O43927 109 aa22.53■■□□□ 1.2
LSM6-202ENST00000502781 HSD17B1P14061 328 aa22.53■■□□□ 1.2
LSM6-202ENST00000502781 HTR1EP28566 365 aa22.53■■□□□ 1.2
LSM6-202ENST00000502781 EIF1AXP47813 144 aaKnown RBP22.53■■□□□ 1.2
LSM6-202ENST00000502781 CDSNQ15517 529 aa22.53■■□□□ 1.2
LSM6-202ENST00000502781 PDSS1Q5T2R2 415 aa22.53■■□□□ 1.2
LSM6-202ENST00000502781 POMZP3Q6PJE2 187 aa22.53■■□□□ 1.2
LSM6-202ENST00000502781 DEFB107AQ8IZN7 70 aa22.53■■□□□ 1.2
LSM6-202ENST00000502781 CADM2Q8N3J6 435 aa22.53■■□□□ 1.2
LSM6-202ENST00000502781 FIG4Q92562 907 aa22.53■■□□□ 1.2
LSM6-202ENST00000502781 OSTF1Q92882 214 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms