RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 GUSBP08236 651 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 SULT1A3P0DMM9 295 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 SULT1A4P0DMN0 295 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 RBMS1P29558 406 aaKnown RBP3.62□□□□□ -1.83
CLTC-209ENST00000498711 CALCRP30988 508 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 MTNR1AP48039 350 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 CCL23P55773 120 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 DCAF7P61962 342 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 GNA13Q14344 377 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 MFSD13AQ14CX5 517 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 BTBD16Q32M84 506 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 ZNF805Q5CZA5 627 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 OR2G6Q5TZ20 316 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 TMEM215Q68D42 235 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 TXNDC8Q6A555 127 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 HBMQ6B0K9 141 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 TMEM220Q6QAJ8 160 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 SMARCD3Q6STE5 483 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 TEX261Q6UWH6 196 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 PAMR1Q6UXH9 720 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 TMPRSS11BQ86T26 416 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 OAFQ86UD1 273 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 LRRC28Q86X40 367 aaPredicted RBP3.62□□□□□ -1.83
CLTC-209ENST00000498711 ZNF547Q8IVP9 402 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 ELMOD2Q8IZ81 293 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 ANKRD53Q8N9V6 530 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 LSM14AQ8ND56 463 aaKnown RBP3.62□□□□□ -1.83
CLTC-209ENST00000498711 AGBL5Q8NDL9 886 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 VN1R2Q8NFZ6 395 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 OR5H6Q8NGV6 325 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 ENKURQ8TC29 256 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 DTD2Q96FN9 168 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 MSANTD3Q96H12 275 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 FOPNLQ96NB1 174 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 TREX2Q9BQ50 279 aaPredicted RBP3.62□□□□□ -1.83
CLTC-209ENST00000498711 MS4A7Q9GZW8 240 aaPredicted RBP3.62□□□□□ -1.83
CLTC-209ENST00000498711 UBE2ZQ9H832 354 aaPredicted RBP3.62□□□□□ -1.83
CLTC-209ENST00000498711 EVA1AQ9H8M9 152 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 EXOSC4Q9NPD3 245 aaKnown RBP3.62□□□□□ -1.83
CLTC-209ENST00000498711 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.62□□□□□ -1.83
CLTC-209ENST00000498711 TMEM160Q9NX00 188 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 HAO2Q9NYQ3 351 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 STMN3Q9NZ72 180 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 P2RX2Q9UBL9 471 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 SLC25A13Q9UJS0 675 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 CA14Q9ULX7 337 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.62□□□□□ -1.83
CLTC-209ENST00000498711 NUBP2Q9Y5Y2 271 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 FKBP7Q9Y680 259 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 U3KQ87 197 aa3.62□□□□□ -1.83
CLTC-209ENST00000498711 PCM1Q15154 2024 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 A0A087X0M5 115 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 TRAV1-2A0A0B4J238 106 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 LOC102723971A0A1B0GUV8 181 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 A0A1B0GX30 115 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 C12orf71A8MTZ7 269 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 A8MX80 341 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 GTPBP1O00178 669 aaKnown RBP3.61□□□□□ -1.83
CLTC-209ENST00000498711 CHST10O43529 356 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 PRICKLE3O43900 615 aaPredicted RBP3.61□□□□□ -1.83
CLTC-209ENST00000498711 VEGFDO43915 354 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 NME6O75414 186 aaPredicted RBP3.61□□□□□ -1.83
CLTC-209ENST00000498711 MOSPD3O75425 235 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 MTX2O75431 263 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 TK1P04183 234 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 SERPIND1P05546 499 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 CHRM4P08173 479 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 UBL4AP11441 157 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 POLR2CP19387 275 aaPredicted RBP3.61□□□□□ -1.83
CLTC-209ENST00000498711 ELK1P19419 428 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 SLC2A5P22732 501 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 KELP23276 732 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 DDX6P26196 483 aaKnown RBP eCLIP3.61□□□□□ -1.838e-7■■■□□ 15.3
CLTC-209ENST00000498711 TEAD1P28347 426 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 PRKAR1BP31321 381 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 EVI2BP34910 448 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 FEN1P39748 380 aaKnown RBP3.61□□□□□ -1.83
CLTC-209ENST00000498711 MNDAP41218 407 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 MMP15P51511 669 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 CCR5P51681 352 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 CLCNKAP51800 687 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 ATP12AP54707 1039 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 GPM6BQ13491 265 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 CAMK2DQ13557 499 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 DYRK1AQ13627 763 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 TRAM2Q15035 370 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 WSCD2Q2TBF2 565 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 SLC27A4Q6P1M0 643 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 WASH2PQ6VEQ5 465 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 ADCK2Q7Z695 626 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 ABI3BPQ7Z7G0 1075 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 GLCCI1Q86VQ1 547 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 CCDC28AQ8IWP9 274 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 TAGAPQ8N103 731 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 KLHL36Q8N4N3 616 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 IQCF1Q8N6M8 205 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 LSMEM1Q8N8F7 131 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 SYT14Q8NB59 555 aa3.61□□□□□ -1.83
CLTC-209ENST00000498711 FAM98AQ8NCA5 519 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms