RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 AP3D1O14617 1153 aa16.4■□□□□ 0.22
HOXD11-202ENST00000498438 CASKO14936 926 aa16.4■□□□□ 0.22
HOXD11-202ENST00000498438 DBIP07108 87 aaKnown RBP16.4■□□□□ 0.22
HOXD11-202ENST00000498438 IL7RP16871 459 aa16.4■□□□□ 0.22
HOXD11-202ENST00000498438 HOXB9P17482 250 aaPredicted RBP16.4■□□□□ 0.22
HOXD11-202ENST00000498438 ENPP1P22413 925 aa16.4■□□□□ 0.22
HOXD11-202ENST00000498438 APOBEC1P41238 236 aaKnown RBP16.4■□□□□ 0.22
HOXD11-202ENST00000498438 CRISP3P54108 245 aa16.4■□□□□ 0.22
HOXD11-202ENST00000498438 GNA13Q14344 377 aa16.4■□□□□ 0.22
HOXD11-202ENST00000498438 SYT14P1Q58G82 188 aa16.4■□□□□ 0.22
HOXD11-202ENST00000498438 RPS26P11Q5JNZ5 115 aaPredicted RBP16.4■□□□□ 0.22
HOXD11-202ENST00000498438 BLOC1S3Q6QNY0 202 aa16.4■□□□□ 0.22
HOXD11-202ENST00000498438 ZNF550Q7Z398 422 aa16.4■□□□□ 0.22
HOXD11-202ENST00000498438 GRINAQ7Z429 371 aa16.4■□□□□ 0.22
HOXD11-202ENST00000498438 TUSC5Q8IXB3 177 aa16.4■□□□□ 0.22
HOXD11-202ENST00000498438 PEX5LQ8IYB4 626 aa16.4■□□□□ 0.22
HOXD11-202ENST00000498438 SLC25A43Q8WUT9 341 aaPredicted RBP16.4■□□□□ 0.22
HOXD11-202ENST00000498438 SLC38A5Q8WUX1 472 aa16.4■□□□□ 0.22
HOXD11-202ENST00000498438 PMM1Q92871 262 aa16.4■□□□□ 0.22
HOXD11-202ENST00000498438 SPDL1Q96EA4 605 aa16.4■□□□□ 0.22
HOXD11-202ENST00000498438 THOC1Q96FV9 657 aaKnown RBP16.4■□□□□ 0.22
HOXD11-202ENST00000498438 CALML5Q9NZT1 146 aa16.4■□□□□ 0.22
HOXD11-202ENST00000498438 CHRNA9Q9UGM1 479 aa16.4■□□□□ 0.22
HOXD11-202ENST00000498438 ST6GALNAC2Q9UJ37 374 aa16.4■□□□□ 0.22
HOXD11-202ENST00000498438 DSPPQ9NZW4 1301 aa16.4■□□□□ 0.22
HOXD11-202ENST00000498438 HIVEP1P15822 2718 aa16.39■□□□□ 0.22
HOXD11-202ENST00000498438 A0A096LPI6 279 aa16.39■□□□□ 0.21
HOXD11-202ENST00000498438 PRKD3O94806 890 aa16.39■□□□□ 0.21
HOXD11-202ENST00000498438 TFPTP0C1Z6 253 aa16.39■□□□□ 0.21
HOXD11-202ENST00000498438 KLK2P20151 261 aa16.39■□□□□ 0.21
HOXD11-202ENST00000498438 IDH2P48735 452 aaKnown RBP16.39■□□□□ 0.21
HOXD11-202ENST00000498438 DIO1P49895 249 aa16.39■□□□□ 0.21
HOXD11-202ENST00000498438 ATP4BP51164 291 aa16.39■□□□□ 0.21
HOXD11-202ENST00000498438 IST1P53990 364 aa16.39■□□□□ 0.21
HOXD11-202ENST00000498438 SQLEQ14534 574 aa16.39■□□□□ 0.21
HOXD11-202ENST00000498438 RGNQ15493 299 aa16.39■□□□□ 0.21
HOXD11-202ENST00000498438 LIN52Q52LA3 116 aa16.39■□□□□ 0.21
HOXD11-202ENST00000498438 TMEM201Q5SNT2 666 aa16.39■□□□□ 0.21
HOXD11-202ENST00000498438 ZNF836Q6ZNA1 936 aa16.39■□□□□ 0.21
HOXD11-202ENST00000498438 NUFIP2Q7Z417 695 aaKnown RBP16.39■□□□□ 0.21
HOXD11-202ENST00000498438 STK32CQ86UX6 486 aa16.39■□□□□ 0.21
HOXD11-202ENST00000498438 SLC43A2Q8N370 569 aa16.39■□□□□ 0.21
HOXD11-202ENST00000498438 NINJ1Q92982 152 aa16.39■□□□□ 0.21
HOXD11-202ENST00000498438 TMEM19Q96HH6 336 aa16.39■□□□□ 0.21
HOXD11-202ENST00000498438 GP6Q9HCN6 339 aa16.39■□□□□ 0.21
HOXD11-202ENST00000498438 THUMPD1Q9NXG2 353 aaKnown RBP16.39■□□□□ 0.21
HOXD11-202ENST00000498438 PLEKHA6Q9Y2H5 1048 aa16.39■□□□□ 0.21
HOXD11-202ENST00000498438 SPIN1Q9Y657 262 aaPredicted RBP16.39■□□□□ 0.21
HOXD11-202ENST00000498438 A0A1W2PPR1 153 aa16.38■□□□□ 0.21
HOXD11-202ENST00000498438 TMEM247A6NEH6 219 aa16.38■□□□□ 0.21
HOXD11-202ENST00000498438 SULT2B1O00204 365 aa16.38■□□□□ 0.21
HOXD11-202ENST00000498438 CLIC1O00299 241 aa16.38■□□□□ 0.21
HOXD11-202ENST00000498438 SMAD9O15198 467 aaKnown RBP16.38■□□□□ 0.21
HOXD11-202ENST00000498438 SIAH2O43255 324 aa16.38■□□□□ 0.21
HOXD11-202ENST00000498438 NUDT7P0C024 238 aa16.38■□□□□ 0.21
HOXD11-202ENST00000498438 TFPIP10646 304 aa16.38■□□□□ 0.21
HOXD11-202ENST00000498438 ART1P52961 327 aa16.38■□□□□ 0.21
HOXD11-202ENST00000498438 EPS8Q12929 822 aa16.38■□□□□ 0.21
HOXD11-202ENST00000498438 FADDQ13158 208 aa16.38■□□□□ 0.21
HOXD11-202ENST00000498438 AGKQ53H12 422 aa16.38■□□□□ 0.21
HOXD11-202ENST00000498438 LRIF1Q5T3J3 769 aa16.38■□□□□ 0.21
HOXD11-202ENST00000498438 ANKRD34AQ69YU3 496 aa16.38■□□□□ 0.21
HOXD11-202ENST00000498438 STAC2Q6ZMT1 411 aa16.38■□□□□ 0.21
HOXD11-202ENST00000498438 TMPPEQ6ZT21 453 aa16.38■□□□□ 0.21
HOXD11-202ENST00000498438 BEND4Q6ZU67 534 aa16.38■□□□□ 0.21
HOXD11-202ENST00000498438 LSRQ86X29 649 aaPredicted RBP16.38■□□□□ 0.21
HOXD11-202ENST00000498438 VRK2Q86Y07 508 aa16.38■□□□□ 0.21
HOXD11-202ENST00000498438 MSRB3Q8IXL7 192 aa16.38■□□□□ 0.21
HOXD11-202ENST00000498438 OR52P1PQ8NH57 321 aa16.38■□□□□ 0.21
HOXD11-202ENST00000498438 ZC3HAV1LQ96H79 300 aaKnown RBP16.38■□□□□ 0.21
HOXD11-202ENST00000498438 PSD2Q9BQI7 771 aa16.38■□□□□ 0.21
HOXD11-202ENST00000498438 OR11A1Q9GZK7 315 aa16.38■□□□□ 0.21
HOXD11-202ENST00000498438 RAD21L1Q9H4I0 556 aa16.38■□□□□ 0.21
HOXD11-202ENST00000498438 PLEKHF2Q9H8W4 249 aa16.38■□□□□ 0.21
HOXD11-202ENST00000498438 SLC52A3Q9NQ40 469 aa16.38■□□□□ 0.21
HOXD11-202ENST00000498438 CCM2LQ9NUG4 571 aaPredicted RBP16.38■□□□□ 0.21
HOXD11-202ENST00000498438 RLIMQ9NVW2 624 aa16.38■□□□□ 0.21
HOXD11-202ENST00000498438 ZNF226Q9NYT6 803 aa16.38■□□□□ 0.21
HOXD11-202ENST00000498438 SLC25A37Q9NYZ2 338 aa16.38■□□□□ 0.21
HOXD11-202ENST00000498438 C6orf203Q9P0P8 240 aaPredicted RBP16.38■□□□□ 0.21
HOXD11-202ENST00000498438 SLAMF8Q9P0V8 285 aa16.38■□□□□ 0.21
HOXD11-202ENST00000498438 KLHL9Q9P2J3 617 aa16.38■□□□□ 0.21
HOXD11-202ENST00000498438 ZNF443Q9Y2A4 671 aaPredicted RBP16.38■□□□□ 0.21
HOXD11-202ENST00000498438 CDHR4A6H8M9 788 aa16.37■□□□□ 0.21
HOXD11-202ENST00000498438 CFAP73A6NFT4 308 aa16.37■□□□□ 0.21
HOXD11-202ENST00000498438 DEFB108AA8MXU0 73 aa16.37■□□□□ 0.21
HOXD11-202ENST00000498438 EDF1O60869 148 aaKnown RBP16.37■□□□□ 0.21
HOXD11-202ENST00000498438 FESP07332 822 aa16.37■□□□□ 0.21
HOXD11-202ENST00000498438 YES1P07947 543 aa16.37■□□□□ 0.21
HOXD11-202ENST00000498438 CD1EP15812 388 aa16.37■□□□□ 0.21
HOXD11-202ENST00000498438 CRYGSP22914 178 aa16.37■□□□□ 0.21
HOXD11-202ENST00000498438 HTR3AP46098 478 aa16.37■□□□□ 0.21
HOXD11-202ENST00000498438 CSNK2A1P68400 391 aaPredicted RBP16.37■□□□□ 0.21
HOXD11-202ENST00000498438 PAGE3Q5JUK9 113 aa16.37■□□□□ 0.21
HOXD11-202ENST00000498438 PAMR1Q6UXH9 720 aa16.37■□□□□ 0.21
HOXD11-202ENST00000498438 TFAP2EQ6VUC0 442 aa16.37■□□□□ 0.21
HOXD11-202ENST00000498438 C22orf34Q6ZV56 151 aa16.37■□□□□ 0.21
HOXD11-202ENST00000498438 ADGRG3Q86Y34 549 aa16.37■□□□□ 0.21
HOXD11-202ENST00000498438 STON2Q8WXE9 905 aa16.37■□□□□ 0.21
HOXD11-202ENST00000498438 MAL2Q969L2 176 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms