RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 FCRL1Q96LA6 429 aa4.19□□□□□ -1.74
SSR3-209ENST00000498205 RNF145Q96MT1 663 aa4.19□□□□□ -1.74
SSR3-209ENST00000498205 ZBTB18Q99592 522 aa4.19□□□□□ -1.74
SSR3-209ENST00000498205 RAD9AQ99638 391 aa4.19□□□□□ -1.74
SSR3-209ENST00000498205 TMEM175Q9BSA9 504 aa4.19□□□□□ -1.74
SSR3-209ENST00000498205 MCRIP2Q9BUT9 160 aaKnown RBP4.19□□□□□ -1.74
SSR3-209ENST00000498205 CHID1Q9BWS9 393 aa4.19□□□□□ -1.74
SSR3-209ENST00000498205 RPF2Q9H7B2 306 aaKnown RBP4.19□□□□□ -1.74
SSR3-209ENST00000498205 NANOGQ9H9S0 305 aa4.19□□□□□ -1.74
SSR3-209ENST00000498205 SIAEQ9HAT2 523 aa4.19□□□□□ -1.74
SSR3-209ENST00000498205 NMUR1Q9HB89 426 aa4.19□□□□□ -1.74
SSR3-209ENST00000498205 FBXO8Q9NRD0 319 aa4.19□□□□□ -1.74
SSR3-209ENST00000498205 TMEM161AQ9NX61 479 aa4.19□□□□□ -1.74
SSR3-209ENST00000498205 NFKBIL1Q9UBC1 381 aaPredicted RBP4.19□□□□□ -1.74
SSR3-209ENST00000498205 TRMT6Q9UJA5 497 aaKnown RBP4.19□□□□□ -1.74
SSR3-209ENST00000498205 ZNF225Q9UK10 706 aa4.19□□□□□ -1.74
SSR3-209ENST00000498205 ZNF510Q9Y2H8 683 aa4.19□□□□□ -1.74
SSR3-209ENST00000498205 MRPS28Q9Y2Q9 187 aaKnown RBP4.19□□□□□ -1.74
SSR3-209ENST00000498205 SH3GLB1Q9Y371 365 aa4.19□□□□□ -1.74
SSR3-209ENST00000498205 CCL27Q9Y4X3 112 aa4.19□□□□□ -1.74
SSR3-209ENST00000498205 CROCCQ5TZA2 2017 aa4.19□□□□□ -1.74
SSR3-209ENST00000498205 A0A096LPI6 279 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 ISPDA4D126 451 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 CCDC160A6NGH7 325 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 CASTOR2A6NHX0 329 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 FAM220BPB1ANY3 271 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 CACNB4O00305 520 aaPredicted RBP4.18□□□□□ -1.74
SSR3-209ENST00000498205 EI24O14681 340 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 LSM1O15116 133 aaKnown RBP4.18□□□□□ -1.74
SSR3-209ENST00000498205 RAD51BO15315 384 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 INPP4BO15327 924 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 PFDN1O60925 122 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 KHDRBS3O75525 346 aaKnown RBP4.18□□□□□ -1.74
SSR3-209ENST00000498205 ERAL1O75616 437 aaKnown RBP4.18□□□□□ -1.74
SSR3-209ENST00000498205 CLPXO76031 633 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 RHOBTB1O94844 696 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 GABARAPO95166 117 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 ALOX5P09917 674 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 ZNF883P0CG24 379 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 THRBP10828 461 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 ETS2P15036 469 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 CD1EP15812 388 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 ZNF7P17097 686 aaPredicted RBP4.18□□□□□ -1.74
SSR3-209ENST00000498205 POLR2EP19388 210 aaKnown RBP4.18□□□□□ -1.74
SSR3-209ENST00000498205 PPIBP23284 216 aaKnown RBP4.18□□□□□ -1.74
SSR3-209ENST00000498205 EEF1DP29692 281 aaKnown RBP4.18□□□□□ -1.74
SSR3-209ENST00000498205 OXTRP30559 389 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 OR1E1P30953 314 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 TUFMP49411 452 aaKnown RBP4.18□□□□□ -1.74
SSR3-209ENST00000498205 HNMTP50135 292 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 PSMD7P51665 324 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 DIO3P55073 304 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 CDH13P55290 713 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 AP1S2P56377 157 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 HUNKP57058 714 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 DMPKQ09013 629 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 RALGDSQ12967 914 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 TMED1Q13445 227 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 VEZF1Q14119 521 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 GRB7Q14451 532 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 TSNQ15631 228 aaKnown RBP4.18□□□□□ -1.74
SSR3-209ENST00000498205 TOR1AIP1Q5JTV8 583 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 ADAMTSL4-AS1Q5T5F5 129 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 SYT6Q5T7P8 510 aaPredicted RBP4.18□□□□□ -1.74
SSR3-209ENST00000498205 MFSD14CQ5VZR4 134 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 CLEC6AQ6EIG7 209 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 XAF1Q6GPH4 301 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 SLC8B1Q6J4K2 584 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 PRR27Q6MZM9 219 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 SBSNQ6UWP8 590 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 MOB2Q70IA6 237 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 DET1Q7L5Y6 550 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 CAMKMTQ7Z624 323 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 CLVS1Q8IUQ0 354 aaPredicted RBP4.18□□□□□ -1.74
SSR3-209ENST00000498205 KLHDC8AQ8IYD2 350 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 C8orf59Q8N0T1 100 aaPredicted RBP4.18□□□□□ -1.74
SSR3-209ENST00000498205 LGI2Q8N0V4 545 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 ZNF786Q8N393 782 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 ZCCHC7Q8N3Z6 543 aaKnown RBP4.18□□□□□ -1.74
SSR3-209ENST00000498205 RNF148Q8N7C7 305 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 ZNF557Q8N988 423 aaPredicted RBP4.18□□□□□ -1.74
SSR3-209ENST00000498205 TMEM178AQ8NBL3 297 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 OR52K2Q8NGK3 314 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 OR5K1Q8NHB7 308 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 ITFG1Q8TB96 612 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 SLC13A3Q8WWT9 602 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 FCGR1BQ92637 280 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 GTF2H4Q92759 462 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 FBXO32Q969P5 355 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 BIRC7Q96CA5 298 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 CXorf40BQ96DE9 158 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 ZNF641Q96N77 438 aaPredicted RBP4.18□□□□□ -1.74
SSR3-209ENST00000498205 RPRD1AQ96P16 312 aaPredicted RBP4.18□□□□□ -1.74
SSR3-209ENST00000498205 URM1Q9BTM9 101 aaKnown RBP4.18□□□□□ -1.74
SSR3-209ENST00000498205 MRPL9Q9BYD2 267 aaKnown RBP4.18□□□□□ -1.74
SSR3-209ENST00000498205 S1PR5Q9H228 398 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 ACTL8Q9H568 366 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 DUSP21Q9H596 190 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 CLMPQ9H6B4 373 aa4.18□□□□□ -1.74
SSR3-209ENST00000498205 SYNDIG1Q9H7V2 258 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms