RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 TMED4Q7Z7H5 227 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 CROCCP2Q86T23 111 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 TMEM139Q8IV31 216 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 GLB1L2Q8IW92 636 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 SKA3Q8IX90 412 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 CLDN22Q8N7P3 220 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 AQP11Q8NBQ7 271 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 SLC16A11Q8NCK7 471 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 OR4M1Q8NGD0 313 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 OR52N4Q8NGI2 321 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 OR5J2Q8NH18 312 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 KCNG3Q8TAE7 436 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 ABHD3Q8WU67 409 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 UBTD2Q8WUN7 234 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 MIB2Q96AX9 1013 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 FKBP10Q96AY3 582 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 PABPC5Q96DU9 382 aaKnown RBP2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 MAGEB18Q96M61 343 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 COQ10AQ96MF6 247 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 ZNF382Q96SR6 550 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 NPAS2Q99743 824 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 TTYH2Q9BSA4 534 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 THAP7Q9BT49 309 aaPredicted RBP2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 NDUFAF3Q9BU61 184 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 ZNF426Q9BUY5 554 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 ALG12Q9BV10 488 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 ALOXE3Q9BYJ1 711 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 ROPN1BQ9BZX4 212 aaPredicted RBP2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 ARV1Q9H2C2 271 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 TPT1P8Q9HAU6 139 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 PDGFCQ9NRA1 345 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 DDIT4Q9NX09 232 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 GPR83Q9NYM4 423 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 HAO2Q9NYQ3 351 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 RDH8Q9NYR8 311 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 SPG21Q9NZD8 308 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 IFNKQ9P0W0 207 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 PRPF19Q9UMS4 504 aaKnown RBP2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 OR51B4Q9Y5P0 310 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 KPTNQ9Y664 436 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 TAF1P21675 1872 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 TMEM131LA2VDJ0 1609 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 SPEF2Q9C093 1822 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 ZNFX1Q9P2E3 1918 aaKnown RBP2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 SLC22A23A1A5C7 686 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 FAM90A18PA6NE21 464 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 FAM90A16PA6NEW6 464 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 FAM90A20PA6NIJ5 464 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 SH2D7A6NKC9 451 aaPredicted RBP2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 GJE1A6NN92 205 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 FAM90A9PA6NNJ1 464 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 FAM90A5PA8MXJ8 464 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 CYB5BO43169 146 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 B4GALT5O43286 388 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 HOXA3O43365 443 aaPredicted RBP2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 KLRC4O43908 158 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 FCMRO60667 390 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 OR2B3O76000 313 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 GLP2RO95838 553 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 TXNDC12O95881 172 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 GH1P01241 217 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 IFNA7P01567 189 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 GCP02774 474 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 AMY1AP04745 511 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 FAM90A15PP0C7V4 464 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 FAM90A14PP0C7W9 464 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 SMIM10L1P0DMW3 83 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 RAP2AP10114 183 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 G6PDP11413 515 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 CETPP11597 493 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 UCHL3P15374 230 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 HIST1H1BP16401 226 aaKnown RBP2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 CSNK2A2P19784 350 aaPredicted RBP2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 UQCRC2P22695 453 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 LHCGRP22888 699 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 MST1P26927 711 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 STOMP27105 288 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 SLC6A4P31645 630 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 PBX1P40424 430 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 GRIA3P42263 894 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 AKR1C3P42330 323 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 PTGFRP43088 359 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 HTR5AP47898 357 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 MTNR1AP48039 350 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 GCLMP48507 274 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 PDLIM4P50479 330 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 SLC37A1P57057 533 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 NAAAQ02083 359 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 EMX2Q04743 252 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 CSTF1Q05048 431 aaKnown RBP2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 ZFP36L1Q07352 338 aaKnown RBP2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 RBBP4Q09028 425 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 CNTN1Q12860 1018 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 HNRNPA0Q13151 305 aaKnown RBP2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 GK2Q14410 553 aaPredicted RBP2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 RPE65Q16518 533 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 HLFQ16534 295 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 MAN2A1Q16706 1144 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 MEP1AQ16819 746 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms