RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-208ENST00000496852 REEP1Q9H902 201 aa12.65□□□□□ -0.38
ATPAF2-208ENST00000496852 ACER3Q9NUN7 267 aa12.65□□□□□ -0.38
ATPAF2-208ENST00000496852 QPCTLQ9NXS2 382 aa12.65□□□□□ -0.38
ATPAF2-208ENST00000496852 DKKL1Q9UK85 242 aa12.65□□□□□ -0.38
ATPAF2-208ENST00000496852 ITPR1Q14643 2758 aa12.65□□□□□ -0.38
ATPAF2-208ENST00000496852 BOD1L1Q8NFC6 3051 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 C7orf72A4D263 438 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 FAM166BA8MTA8 275 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 ACOT7O00154 380 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 HPNP05981 417 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 THRBP10828 461 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 GP1BBP13224 206 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 HK1P19367 917 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 IFNA8P32881 189 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 ARHGDIAP52565 204 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 PPIAP62937 165 aaKnown RBP12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 FOXF1Q12946 379 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 TMEM44Q2T9K0 475 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 GLYR1Q49A26 553 aaPredicted RBP12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 ULK3Q6PHR2 472 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 GRINAQ7Z429 371 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 GDF7Q7Z4P5 450 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 FAM109AQ8N4B1 249 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 Q8NA96 180 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 FAM83FQ8NEG4 500 aaPredicted RBP12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 DTNBP1Q96EV8 351 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 WBP1Q96G27 269 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 SLC41A3Q96GZ6 507 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 MRGPRX4Q96LA9 322 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 CIB1Q99828 191 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 PRSS27Q9BQR3 290 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 FNDC11Q9BVV2 318 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 MAN2C1Q9NTJ4 1040 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 RPS6KB2Q9UBS0 482 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 SAMHD1Q9Y3Z3 626 aaKnown RBP12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 CACNA1BQ00975 2339 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 SVILO95425 2214 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 FAM47E-STBD1D6RA91 191 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 TNFRSF11BO00300 401 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 ADAMDEC1O15204 470 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 CHP2O43745 196 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 GADD45GO95257 159 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 CELA3AP09093 270 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 PEX2P28328 305 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 ADH6P28332 368 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 TACR3P29371 465 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 IST1P53990 364 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 FOXK1P85037 733 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 ST3GAL3Q11203 375 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 LY6DQ14210 128 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 TOMM20Q15388 145 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 ALG10BQ5I7T1 473 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 SWT1Q5T5J6 900 aaKnown RBP12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 LINC00114Q6XXX2 140 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 ATG4DQ86TL0 474 aaPredicted RBP12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 GTPBP8Q8N3Z3 284 aaPredicted RBP12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 DNAJA4Q8WW22 397 aaPredicted RBP12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 NRG4Q8WWG1 115 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 SLC38A4Q969I6 547 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 ZDHHC11Q9H8X9 412 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 NMNAT1Q9HAN9 279 aaPredicted RBP12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 C12orf10Q9HB07 376 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 LUZP4Q9P127 313 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 OSGIN1Q9UJX0 560 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 SLC7A7Q9UM01 511 aa12.64□□□□□ -0.39
ATPAF2-208ENST00000496852 TLN1Q9Y490 2541 aaKnown RBP12.63□□□□□ -0.39
ATPAF2-208ENST00000496852 SHISA8B8ZZ34 492 aa12.63□□□□□ -0.39
ATPAF2-208ENST00000496852 PDLIM1O00151 329 aa12.63□□□□□ -0.39
ATPAF2-208ENST00000496852 H1F0P07305 194 aaKnown RBP12.63□□□□□ -0.39
ATPAF2-208ENST00000496852 ZNF17P17021 662 aa12.63□□□□□ -0.39
ATPAF2-208ENST00000496852 ZNF24P17028 368 aa12.63□□□□□ -0.39
ATPAF2-208ENST00000496852 EIF1P41567 113 aaKnown RBP12.63□□□□□ -0.39
ATPAF2-208ENST00000496852 HTR3AP46098 478 aa12.63□□□□□ -0.39
ATPAF2-208ENST00000496852 B3GALT5-AS1P59052 145 aa12.63□□□□□ -0.39
ATPAF2-208ENST00000496852 FGD3Q5JSP0 725 aa12.63□□□□□ -0.39
ATPAF2-208ENST00000496852 OTUD3Q5T2D3 398 aaPredicted RBP12.63□□□□□ -0.39
ATPAF2-208ENST00000496852 WDR88Q6ZMY6 472 aa12.63□□□□□ -0.39
ATPAF2-208ENST00000496852 YRDCQ86U90 279 aaKnown RBP12.63□□□□□ -0.39
ATPAF2-208ENST00000496852 LSRQ86X29 649 aaPredicted RBP12.63□□□□□ -0.39
ATPAF2-208ENST00000496852 ADGRG3Q86Y34 549 aa12.63□□□□□ -0.39
ATPAF2-208ENST00000496852 GALNT4Q8N4A0 578 aa12.63□□□□□ -0.39
ATPAF2-208ENST00000496852 VCX3BQ9H321 246 aa12.63□□□□□ -0.39
ATPAF2-208ENST00000496852 ANKRD19PQ9H560 264 aa12.63□□□□□ -0.39
ATPAF2-208ENST00000496852 ACKR4Q9NPB9 350 aa12.63□□□□□ -0.39
ATPAF2-208ENST00000496852 VNN3Q9NY84 501 aa12.63□□□□□ -0.39
ATPAF2-208ENST00000496852 OAZ3Q9UMX2 235 aa12.63□□□□□ -0.39
ATPAF2-208ENST00000496852 RPH3AQ9Y2J0 694 aaPredicted RBP12.63□□□□□ -0.39
ATPAF2-208ENST00000496852 LYVE1Q9Y5Y7 322 aa12.63□□□□□ -0.39
ATPAF2-208ENST00000496852 A0A087WUJ7 227 aa12.62□□□□□ -0.39
ATPAF2-208ENST00000496852 A0A1W2PRQ8 180 aa12.62□□□□□ -0.39
ATPAF2-208ENST00000496852 OR2M5A3KFT3 312 aa12.62□□□□□ -0.39
ATPAF2-208ENST00000496852 G3V2T6 193 aa12.62□□□□□ -0.39
ATPAF2-208ENST00000496852 EFNA2O43921 213 aa12.62□□□□□ -0.39
ATPAF2-208ENST00000496852 TRAPPC6AO75865 159 aa12.62□□□□□ -0.39
ATPAF2-208ENST00000496852 TCEA1P23193 301 aaKnown RBP12.62□□□□□ -0.39
ATPAF2-208ENST00000496852 VHLP40337 213 aa12.62□□□□□ -0.39
ATPAF2-208ENST00000496852 APOBEC1P41238 236 aaKnown RBP12.62□□□□□ -0.39
ATPAF2-208ENST00000496852 LIMS1P48059 325 aa12.62□□□□□ -0.39
ATPAF2-208ENST00000496852 POLR2HP52434 150 aaKnown RBP12.62□□□□□ -0.39
ATPAF2-208ENST00000496852 HMGA2P52926 109 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms