RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 MRPS18CQ9Y3D5 142 aaKnown RBP7.86□□□□□ -1.15
U2AF1-212ENST00000496462 TRAV36DV7A0A075B6V5 113 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 A0A1W2PS29 197 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 HSPB2A8KAH6 182 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 SERPINI2O75830 405 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 MT-ATP6P00846 226 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 CHRM4P08173 479 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 IFI30P13284 250 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 PEX19P40855 299 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 HSPB2Q16082 182 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 ZNF544Q6NX49 715 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 CASP12Q6UXS9 341 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 JAZF1Q86VZ6 243 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 UEVLDQ8IX04 471 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 SVOPLQ8N434 492 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 TMEM251Q8N6I4 163 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 OR4C3Q8NH37 302 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 GIPC3Q8TF64 312 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 CNOT9Q92600 299 aaKnown RBP7.86□□□□□ -1.15
U2AF1-212ENST00000496462 C1GALT1C1Q96EU7 318 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 ACKR4Q9NPB9 350 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 CHCHD3Q9NX63 227 aaKnown RBP7.86□□□□□ -1.15
U2AF1-212ENST00000496462 RIMS3Q9UJD0 308 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 PACSIN3Q9UKS6 424 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 WDFY3Q8IZQ1 3526 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 FAAHO00519 579 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 FCMRO60667 390 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 FARS2O95363 451 aaKnown RBP7.86□□□□□ -1.15
U2AF1-212ENST00000496462 OR1Q1Q15612 314 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 BCL2A1Q16548 175 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 WIPI1Q5MNZ9 446 aaPredicted RBP7.86□□□□□ -1.15
U2AF1-212ENST00000496462 OR2T5Q6IEZ7 315 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 LCN8Q6JVE9 175 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 B3GNT6Q6ZMB0 384 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 CCDC80Q76M96 950 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 GTPBP8Q8N3Z3 284 aaPredicted RBP7.86□□□□□ -1.15
U2AF1-212ENST00000496462 ZNF441Q8N8Z8 693 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 ZFP62Q8NB50 900 aaPredicted RBP7.86□□□□□ -1.15
U2AF1-212ENST00000496462 OR2T29Q8NH02 315 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 FNDC8Q8TC99 324 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 ARSGQ96EG1 525 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 CLPTM1LQ96KA5 538 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 GNRHR2Q96P88 292 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 POTEKPQ9BYX7 375 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 SAP130Q9H0E3 1048 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 RASSF4Q9H2L5 321 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 SLC25A37Q9NYZ2 338 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 SLAMF8Q9P0V8 285 aa7.86□□□□□ -1.15
U2AF1-212ENST00000496462 CNOT11Q9UKZ1 510 aaKnown RBP7.86□□□□□ -1.15
U2AF1-212ENST00000496462 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 C2orf72A6NCS6 295 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 SLC22A20A6NK97 555 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 DNPH1O43598 174 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 AGFG2O95081 481 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 RENP00797 406 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 NUDT7P0C024 238 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 RFC3P40938 356 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 RBM34P42696 430 aaKnown RBP7.85□□□□□ -1.15
U2AF1-212ENST00000496462 RNPS1Q15287 305 aaKnown RBP7.85□□□□□ -1.15
U2AF1-212ENST00000496462 OFCC1Q8IZS5 231 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 LILRA2Q8N149 483 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 GPR137CQ8N3F9 429 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 OR2M3Q8NG83 312 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 OR10H5Q8NGA6 315 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 NEIL3Q8TAT5 605 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 GNPDA2Q8TDQ7 276 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 RND1Q92730 232 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 HGDQ93099 445 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 OTULINQ96BN8 352 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 SLC19A3Q9BZV2 496 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 TSPAN10Q9H1Z9 355 aaPredicted RBP7.85□□□□□ -1.15
U2AF1-212ENST00000496462 GALNT9Q9HCQ5 603 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 CTPS2Q9NRF8 586 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 DCAF13Q9NV06 445 aaKnown RBP7.85□□□□□ -1.15
U2AF1-212ENST00000496462 ABCD2Q9UBJ2 740 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 MGAT4BQ9UQ53 548 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 TESMINQ9Y4I5 508 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 CIB4A0PJX0 185 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 hCG_2039718K7EN88 272 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 TMCC2O75069 709 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 LGI1O95970 557 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 POU1F1P28069 291 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 SLC6A6P31641 620 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 MAGEA5P43359 124 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 ZNF84P51523 738 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 KIF18BQ86Y91 864 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 GIMAP5Q96F15 307 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 TRIB1Q96RU8 372 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 CHID1Q9BWS9 393 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 POMPQ9Y244 141 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 CDHR4A6H8M9 788 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 RNF13O43567 381 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 CHP2O43745 196 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 HMGN1P05114 100 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 GKN3PP0CG01 181 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 DNAJA1P31689 397 aaKnown RBP7.85□□□□□ -1.15
U2AF1-212ENST00000496462 RPS6KA3P51812 740 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 PRPS1P60891 318 aa7.85□□□□□ -1.15
U2AF1-212ENST00000496462 CNEP1R1Q8N9A8 125 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms