RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 MRPL2Q5T653 305 aaKnown RBP12.92□□□□□ -0.34
PDAP1-204ENST00000496335 FCRLAQ7L513 359 aa12.92□□□□□ -0.34
PDAP1-204ENST00000496335 VRK2Q86Y07 508 aa12.92□□□□□ -0.34
PDAP1-204ENST00000496335 MSRB3Q8IXL7 192 aa12.92□□□□□ -0.34
PDAP1-204ENST00000496335 OR52P1PQ8NH57 321 aa12.92□□□□□ -0.34
PDAP1-204ENST00000496335 RNF128Q8TEB7 428 aa12.92□□□□□ -0.34
PDAP1-204ENST00000496335 SPDL1Q96EA4 605 aa12.92□□□□□ -0.34
PDAP1-204ENST00000496335 DNAJA3Q96EY1 480 aa12.92□□□□□ -0.34
PDAP1-204ENST00000496335 TMEM19Q96HH6 336 aa12.92□□□□□ -0.34
PDAP1-204ENST00000496335 WFIKKN1Q96NZ8 548 aa12.92□□□□□ -0.34
PDAP1-204ENST00000496335 CCDC106Q9BWC9 280 aa12.92□□□□□ -0.34
PDAP1-204ENST00000496335 C12orf49Q9H741 205 aa12.92□□□□□ -0.34
PDAP1-204ENST00000496335 SERINC1Q9NRX5 453 aa12.92□□□□□ -0.34
PDAP1-204ENST00000496335 GLRX2Q9NS18 164 aa12.92□□□□□ -0.34
PDAP1-204ENST00000496335 RLIMQ9NVW2 624 aa12.92□□□□□ -0.34
PDAP1-204ENST00000496335 KLHL28Q9NXS3 571 aa12.92□□□□□ -0.34
PDAP1-204ENST00000496335 ELOVL5Q9NYP7 299 aa12.92□□□□□ -0.34
PDAP1-204ENST00000496335 NDRG3Q9UGV2 375 aa12.92□□□□□ -0.34
PDAP1-204ENST00000496335 DSPPQ9NZW4 1301 aa12.91□□□□□ -0.34
PDAP1-204ENST00000496335 MAP1AP78559 2803 aaPredicted RBP12.91□□□□□ -0.34
PDAP1-204ENST00000496335 C16orf97H3BN30 126 aa12.91□□□□□ -0.34
PDAP1-204ENST00000496335 PABPC4LP0CB38 370 aaKnown RBP12.91□□□□□ -0.34
PDAP1-204ENST00000496335 TFPIP10646 304 aa12.91□□□□□ -0.34
PDAP1-204ENST00000496335 CCNA2P20248 432 aa12.91□□□□□ -0.34
PDAP1-204ENST00000496335 DNAJA1P31689 397 aaKnown RBP12.91□□□□□ -0.34
PDAP1-204ENST00000496335 UGT2B10P36537 528 aa12.91□□□□□ -0.34
PDAP1-204ENST00000496335 APOBEC1P41238 236 aaKnown RBP12.91□□□□□ -0.34
PDAP1-204ENST00000496335 ATP4BP51164 291 aa12.91□□□□□ -0.34
PDAP1-204ENST00000496335 CRISP3P54108 245 aa12.91□□□□□ -0.34
PDAP1-204ENST00000496335 RAC3P60763 192 aa12.91□□□□□ -0.34
PDAP1-204ENST00000496335 SQLEQ14534 574 aa12.91□□□□□ -0.34
PDAP1-204ENST00000496335 SYT14P1Q58G82 188 aa12.91□□□□□ -0.34
PDAP1-204ENST00000496335 FBXW10Q5XX13 1052 aa12.91□□□□□ -0.34
PDAP1-204ENST00000496335 ANKRD34AQ69YU3 496 aa12.91□□□□□ -0.34
PDAP1-204ENST00000496335 GTF2IRD2BQ6EKJ0 949 aa12.91□□□□□ -0.34
PDAP1-204ENST00000496335 ZNF836Q6ZNA1 936 aa12.91□□□□□ -0.34
PDAP1-204ENST00000496335 C22orf34Q6ZV56 151 aa12.91□□□□□ -0.34
PDAP1-204ENST00000496335 NUFIP2Q7Z417 695 aaKnown RBP12.91□□□□□ -0.34
PDAP1-204ENST00000496335 GTF2IRD2Q86UP8 949 aa12.91□□□□□ -0.34
PDAP1-204ENST00000496335 ADGRG3Q86Y34 549 aa12.91□□□□□ -0.34
PDAP1-204ENST00000496335 TUSC5Q8IXB3 177 aa12.91□□□□□ -0.34
PDAP1-204ENST00000496335 CMIPQ8IY22 773 aa12.91□□□□□ -0.34
PDAP1-204ENST00000496335 PEX5LQ8IYB4 626 aa12.91□□□□□ -0.34
PDAP1-204ENST00000496335 C10orf111Q8N326 155 aa12.91□□□□□ -0.34
PDAP1-204ENST00000496335 PMM1Q92871 262 aa12.91□□□□□ -0.34
PDAP1-204ENST00000496335 MAL2Q969L2 176 aa12.91□□□□□ -0.34
PDAP1-204ENST00000496335 KLHL4Q9C0H6 718 aa12.91□□□□□ -0.34
PDAP1-204ENST00000496335 CALML5Q9NZT1 146 aa12.91□□□□□ -0.34
PDAP1-204ENST00000496335 TESMINQ9Y4I5 508 aa12.91□□□□□ -0.34
PDAP1-204ENST00000496335 ROS1P08922 2347 aa12.9□□□□□ -0.34
PDAP1-204ENST00000496335 SULT2B1O00204 365 aa12.9□□□□□ -0.34
PDAP1-204ENST00000496335 CASKO14936 926 aa12.9□□□□□ -0.34
PDAP1-204ENST00000496335 SMAD9O15198 467 aaKnown RBP12.9□□□□□ -0.34
PDAP1-204ENST00000496335 PRKD3O94806 890 aa12.9□□□□□ -0.34
PDAP1-204ENST00000496335 GKN3PP0CG01 181 aa12.9□□□□□ -0.34
PDAP1-204ENST00000496335 PCYT1AP49585 367 aa12.9□□□□□ -0.34
PDAP1-204ENST00000496335 DIO1P49895 249 aa12.9□□□□□ -0.34
PDAP1-204ENST00000496335 EPS8Q12929 822 aa12.9□□□□□ -0.34
PDAP1-204ENST00000496335 GNA13Q14344 377 aa12.9□□□□□ -0.34
PDAP1-204ENST00000496335 RNPS1Q15287 305 aaKnown RBP12.9□□□□□ -0.34
PDAP1-204ENST00000496335 TMEM201Q5SNT2 666 aa12.9□□□□□ -0.34
PDAP1-204ENST00000496335 LRIF1Q5T3J3 769 aa12.9□□□□□ -0.34
PDAP1-204ENST00000496335 TMPPEQ6ZT21 453 aa12.9□□□□□ -0.34
PDAP1-204ENST00000496335 ZNF550Q7Z398 422 aa12.9□□□□□ -0.34
PDAP1-204ENST00000496335 GRINAQ7Z429 371 aa12.9□□□□□ -0.34
PDAP1-204ENST00000496335 CLIP4Q8N3C7 705 aa12.9□□□□□ -0.34
PDAP1-204ENST00000496335 ARL5BQ96KC2 179 aa12.9□□□□□ -0.34
PDAP1-204ENST00000496335 OR11A1Q9GZK7 315 aa12.9□□□□□ -0.34
PDAP1-204ENST00000496335 VAPAQ9P0L0 249 aa12.9□□□□□ -0.34
PDAP1-204ENST00000496335 KLHL13Q9P2N7 655 aa12.9□□□□□ -0.34
PDAP1-204ENST00000496335 CHRNA9Q9UGM1 479 aa12.9□□□□□ -0.34
PDAP1-204ENST00000496335 ING1Q9UK53 422 aaPredicted RBP12.9□□□□□ -0.34
PDAP1-204ENST00000496335 PRRC2AP48634 2157 aaKnown RBP12.9□□□□□ -0.34
PDAP1-204ENST00000496335 HIVEP1P15822 2718 aa12.9□□□□□ -0.35
PDAP1-204ENST00000496335 A0A0G2JND7 137 aa12.89□□□□□ -0.35
PDAP1-204ENST00000496335 A0A0G2JPF8 293 aa12.89□□□□□ -0.35
PDAP1-204ENST00000496335 A0A1W2PP18 115 aa12.89□□□□□ -0.35
PDAP1-204ENST00000496335 A0A1W2PPR1 153 aa12.89□□□□□ -0.35
PDAP1-204ENST00000496335 CDHR4A6H8M9 788 aa12.89□□□□□ -0.35
PDAP1-204ENST00000496335 TMEM247A6NEH6 219 aa12.89□□□□□ -0.35
PDAP1-204ENST00000496335 CFAP73A6NFT4 308 aa12.89□□□□□ -0.35
PDAP1-204ENST00000496335 HNRNPCL2B2RXH8 293 aa12.89□□□□□ -0.35
PDAP1-204ENST00000496335 HNRNPCL3B7ZW38 293 aa12.89□□□□□ -0.35
PDAP1-204ENST00000496335 HNRNPCL1O60812 293 aaKnown RBP12.89□□□□□ -0.35
PDAP1-204ENST00000496335 HRGP04196 525 aa12.89□□□□□ -0.35
PDAP1-204ENST00000496335 HNRNPCL4P0DMR1 293 aa12.89□□□□□ -0.35
PDAP1-204ENST00000496335 BMP2P12643 396 aa12.89□□□□□ -0.35
PDAP1-204ENST00000496335 TACR3P29371 465 aa12.89□□□□□ -0.35
PDAP1-204ENST00000496335 SF3A3Q12874 501 aaKnown RBP eCLIP12.89□□□□□ -0.35
PDAP1-204ENST00000496335 FADDQ13158 208 aa12.89□□□□□ -0.35
PDAP1-204ENST00000496335 LIN52Q52LA3 116 aa12.89□□□□□ -0.35
PDAP1-204ENST00000496335 STAC2Q6ZMT1 411 aa12.89□□□□□ -0.35
PDAP1-204ENST00000496335 SLC25A43Q8WUT9 341 aaPredicted RBP12.89□□□□□ -0.35
PDAP1-204ENST00000496335 ZNF775Q96BV0 537 aaPredicted RBP12.89□□□□□ -0.35
PDAP1-204ENST00000496335 ZC3HAV1LQ96H79 300 aaKnown RBP12.89□□□□□ -0.35
PDAP1-204ENST00000496335 PSD2Q9BQI7 771 aa12.89□□□□□ -0.35
PDAP1-204ENST00000496335 MED18Q9BUE0 208 aa12.89□□□□□ -0.35
PDAP1-204ENST00000496335 RAD21L1Q9H4I0 556 aa12.89□□□□□ -0.35
PDAP1-204ENST00000496335 IKZF5Q9H5V7 419 aa12.89□□□□□ -0.35
PDAP1-204ENST00000496335 ZNF385DQ9H6B1 395 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms