RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 FBP2O00757 339 aa14.29□□□□□ -0.12
LIME1-209ENST00000494776 MRASO14807 208 aa14.29□□□□□ -0.12
LIME1-209ENST00000494776 AQP8O94778 261 aa14.29□□□□□ -0.12
LIME1-209ENST00000494776 TFPIP10646 304 aa14.29□□□□□ -0.12
LIME1-209ENST00000494776 ETS2P15036 469 aa14.29□□□□□ -0.12
LIME1-209ENST00000494776 CCNA2P20248 432 aa14.29□□□□□ -0.12
LIME1-209ENST00000494776 HTR3AP46098 478 aa14.29□□□□□ -0.12
LIME1-209ENST00000494776 GYS2P54840 703 aa14.29□□□□□ -0.12
LIME1-209ENST00000494776 COPZ1P61923 177 aa14.29□□□□□ -0.12
LIME1-209ENST00000494776 GNGT1P63211 74 aa14.29□□□□□ -0.12
LIME1-209ENST00000494776 EPS8Q12929 822 aa14.29□□□□□ -0.12
LIME1-209ENST00000494776 RNF220Q5VTB9 566 aa14.29□□□□□ -0.12
LIME1-209ENST00000494776 REP15Q6BDI9 236 aa14.29□□□□□ -0.12
LIME1-209ENST00000494776 GTF2IRD2BQ6EKJ0 949 aa14.29□□□□□ -0.12
LIME1-209ENST00000494776 GTF2IRD2Q86UP8 949 aa14.29□□□□□ -0.12
LIME1-209ENST00000494776 CLIP4Q8N3C7 705 aa14.29□□□□□ -0.12
LIME1-209ENST00000494776 PCYOX1LQ8NBM8 494 aa14.29□□□□□ -0.12
LIME1-209ENST00000494776 C11orf65Q8NCR3 313 aa14.29□□□□□ -0.12
LIME1-209ENST00000494776 HIPK4Q8NE63 616 aa14.29□□□□□ -0.12
LIME1-209ENST00000494776 SLC25A43Q8WUT9 341 aaPredicted RBP14.29□□□□□ -0.12
LIME1-209ENST00000494776 RNASE6Q93091 150 aaKnown RBP14.29□□□□□ -0.12
LIME1-209ENST00000494776 ZNF607Q96SK3 696 aa14.29□□□□□ -0.12
LIME1-209ENST00000494776 SH3GL1Q99961 368 aa14.29□□□□□ -0.12
LIME1-209ENST00000494776 CCDC106Q9BWC9 280 aa14.29□□□□□ -0.12
LIME1-209ENST00000494776 CTPS2Q9NRF8 586 aa14.29□□□□□ -0.12
LIME1-209ENST00000494776 ARMCX1Q9P291 453 aa14.29□□□□□ -0.12
LIME1-209ENST00000494776 CHRNA9Q9UGM1 479 aa14.29□□□□□ -0.12
LIME1-209ENST00000494776 FOXD3Q9UJU5 478 aaPredicted RBP14.29□□□□□ -0.12
LIME1-209ENST00000494776 PACSIN3Q9UKS6 424 aa14.29□□□□□ -0.12
LIME1-209ENST00000494776 ANGPT4Q9Y264 503 aa14.29□□□□□ -0.12
LIME1-209ENST00000494776 A0A1W2PNR3 127 aa14.28□□□□□ -0.12
LIME1-209ENST00000494776 GMNCA6NCL1 334 aa14.28□□□□□ -0.12
LIME1-209ENST00000494776 SYT5O00445 386 aa14.28□□□□□ -0.12
LIME1-209ENST00000494776 SLC22A2O15244 555 aa14.28□□□□□ -0.12
LIME1-209ENST00000494776 ADAM11O75078 769 aa14.28□□□□□ -0.12
LIME1-209ENST00000494776 NPPAP01160 153 aa14.28□□□□□ -0.12
LIME1-209ENST00000494776 AQP1P29972 269 aa14.28□□□□□ -0.12
LIME1-209ENST00000494776 LSP1P33241 339 aa14.28□□□□□ -0.12
LIME1-209ENST00000494776 POLR2HP52434 150 aaKnown RBP14.28□□□□□ -0.12
LIME1-209ENST00000494776 CTBP2P56545 445 aa14.28□□□□□ -0.12
LIME1-209ENST00000494776 PLAURQ03405 335 aa14.28□□□□□ -0.12
LIME1-209ENST00000494776 SELPLGQ14242 412 aa14.28□□□□□ -0.12
LIME1-209ENST00000494776 COQ5Q5HYK3 327 aa14.28□□□□□ -0.12
LIME1-209ENST00000494776 DMRTC2Q8IXT2 367 aaPredicted RBP14.28□□□□□ -0.12
LIME1-209ENST00000494776 CADM2Q8N3J6 435 aa14.28□□□□□ -0.12
LIME1-209ENST00000494776 ROBO4Q8WZ75 1007 aa14.28□□□□□ -0.12
LIME1-209ENST00000494776 LRRC58Q96CX6 371 aa14.28□□□□□ -0.12
LIME1-209ENST00000494776 SLC39A3Q9BRY0 314 aa14.28□□□□□ -0.12
LIME1-209ENST00000494776 RBM24Q9BX46 236 aaKnown RBP14.28□□□□□ -0.12
LIME1-209ENST00000494776 SLC24A3Q9HC58 644 aa14.28□□□□□ -0.12
LIME1-209ENST00000494776 GID8Q9NWU2 228 aa14.28□□□□□ -0.12
LIME1-209ENST00000494776 SLC13A4Q9UKG4 626 aa14.28□□□□□ -0.12
LIME1-209ENST00000494776 EMC9Q9Y3B6 208 aa14.28□□□□□ -0.12
LIME1-209ENST00000494776 TMED7-TICAM2A0A0A6YYA0 188 aa14.27□□□□□ -0.13
LIME1-209ENST00000494776 PRORSD1PA6NEY8 169 aa14.27□□□□□ -0.13
LIME1-209ENST00000494776 FAAHO00519 579 aa14.27□□□□□ -0.13
LIME1-209ENST00000494776 SERPINB7O75635 380 aa14.27□□□□□ -0.13
LIME1-209ENST00000494776 TNFSF13O75888 250 aa14.27□□□□□ -0.13
LIME1-209ENST00000494776 FKBP2P26885 142 aaKnown RBP14.27□□□□□ -0.13
LIME1-209ENST00000494776 TACR3P29371 465 aa14.27□□□□□ -0.13
LIME1-209ENST00000494776 PEX19P40855 299 aa14.27□□□□□ -0.13
LIME1-209ENST00000494776 SLC1A3P43003 542 aa14.27□□□□□ -0.13
LIME1-209ENST00000494776 RBBP4Q09028 425 aa14.27□□□□□ -0.13
LIME1-209ENST00000494776 MYBPHQ13203 477 aa14.27□□□□□ -0.13
LIME1-209ENST00000494776 ADRM1Q16186 407 aa14.27□□□□□ -0.13
LIME1-209ENST00000494776 ZNF239Q16600 458 aaKnown RBP14.27□□□□□ -0.13
LIME1-209ENST00000494776 FBXL19-AS1Q494R0 122 aa14.27□□□□□ -0.13
LIME1-209ENST00000494776 SYT14P1Q58G82 188 aa14.27□□□□□ -0.13
LIME1-209ENST00000494776 NANOGP8Q6NSW7 305 aa14.27□□□□□ -0.13
LIME1-209ENST00000494776 VWA1Q6PCB0 445 aa14.27□□□□□ -0.13
LIME1-209ENST00000494776 GDF7Q7Z4P5 450 aa14.27□□□□□ -0.13
LIME1-209ENST00000494776 MTDHQ86UE4 582 aaKnown RBP14.27□□□□□ -0.13
LIME1-209ENST00000494776 KIF18BQ86Y91 864 aa14.27□□□□□ -0.13
LIME1-209ENST00000494776 OR10A6Q8NH74 314 aa14.27□□□□□ -0.13
LIME1-209ENST00000494776 STARD4Q96DR4 205 aa14.27□□□□□ -0.13
LIME1-209ENST00000494776 GMPPAQ96IJ6 420 aaPredicted RBP14.27□□□□□ -0.13
LIME1-209ENST00000494776 ECSITQ9BQ95 431 aa14.27□□□□□ -0.13
LIME1-209ENST00000494776 SRXN1Q9BYN0 137 aa14.27□□□□□ -0.13
LIME1-209ENST00000494776 PIF1Q9H611 641 aa14.27□□□□□ -0.13
LIME1-209ENST00000494776 KAT8Q9H7Z6 458 aaKnown RBP14.27□□□□□ -0.13
LIME1-209ENST00000494776 NANOGQ9H9S0 305 aa14.27□□□□□ -0.13
LIME1-209ENST00000494776 GLRX2Q9NS18 164 aa14.27□□□□□ -0.13
LIME1-209ENST00000494776 CLEC4AQ9UMR7 237 aa14.27□□□□□ -0.13
LIME1-209ENST00000494776 TMED7Q9Y3B3 224 aa14.27□□□□□ -0.13
LIME1-209ENST00000494776 CACNA1CQ13936 2221 aa14.27□□□□□ -0.13
LIME1-209ENST00000494776 DOCK7Q96N67 2140 aa14.27□□□□□ -0.13
LIME1-209ENST00000494776 HEATR5AQ86XA9 2040 aa14.26□□□□□ -0.13
LIME1-209ENST00000494776 SULT2B1O00204 365 aa14.26□□□□□ -0.13
LIME1-209ENST00000494776 MSTNO14793 375 aa14.26□□□□□ -0.13
LIME1-209ENST00000494776 IGFBP2P18065 325 aa14.26□□□□□ -0.13
LIME1-209ENST00000494776 CXCR1P25024 350 aa14.26□□□□□ -0.13
LIME1-209ENST00000494776 PRKAR1BP31321 381 aa14.26□□□□□ -0.13
LIME1-209ENST00000494776 CPOXP36551 454 aa14.26□□□□□ -0.13
LIME1-209ENST00000494776 KIR2DL2P43627 348 aaPredicted RBP14.26□□□□□ -0.13
LIME1-209ENST00000494776 DLX5P56178 289 aa14.26□□□□□ -0.13
LIME1-209ENST00000494776 RAC3P60763 192 aa14.26□□□□□ -0.13
LIME1-209ENST00000494776 CSNK2A1P68400 391 aaPredicted RBP14.26□□□□□ -0.13
LIME1-209ENST00000494776 SNTB1Q13884 538 aaKnown RBP14.26□□□□□ -0.13
LIME1-209ENST00000494776 WBP2NLQ6ICG8 309 aa14.26□□□□□ -0.13
LIME1-209ENST00000494776 FCRLAQ7L513 359 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms