RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 ZNF362Q5T0B9 420 aaPredicted RBP15.12■□□□□ 0.01
ATG4B-225ENST00000494465 NXNL2Q5VZ03 156 aa15.12■□□□□ 0.01
ATG4B-225ENST00000494465 MRPL14Q6P1L8 145 aaKnown RBP15.12■□□□□ 0.01
ATG4B-225ENST00000494465 ATG4DQ86TL0 474 aaPredicted RBP15.12■□□□□ 0.01
ATG4B-225ENST00000494465 OAFQ86UD1 273 aa15.12■□□□□ 0.01
ATG4B-225ENST00000494465 ATCAYQ86WG3 371 aa15.12■□□□□ 0.01
ATG4B-225ENST00000494465 CPOQ8IVL8 374 aa15.12■□□□□ 0.01
ATG4B-225ENST00000494465 MND1Q9BWT6 205 aa15.12■□□□□ 0.01
ATG4B-225ENST00000494465 A0A1W2PQD3 144 aa15.12■□□□□ 0.01
ATG4B-225ENST00000494465 FAM183AA6NL82 134 aa15.12■□□□□ 0.01
ATG4B-225ENST00000494465 SNTNA6NMZ2 147 aa15.12■□□□□ 0.01
ATG4B-225ENST00000494465 ALG1L2C9J202 215 aa15.12■□□□□ 0.01
ATG4B-225ENST00000494465 ADAM10O14672 748 aa15.12■□□□□ 0.01
ATG4B-225ENST00000494465 AIREO43918 545 aa15.12■□□□□ 0.01
ATG4B-225ENST00000494465 CCL4P13236 92 aa15.12■□□□□ 0.01
ATG4B-225ENST00000494465 GRK6P43250 576 aa15.12■□□□□ 0.01
ATG4B-225ENST00000494465 FOXK2Q01167 660 aa15.12■□□□□ 0.01
ATG4B-225ENST00000494465 ZNF117Q03924 483 aa15.12■□□□□ 0.01
ATG4B-225ENST00000494465 SPHARQ15513 63 aa15.12■□□□□ 0.01
ATG4B-225ENST00000494465 C3orf38Q5JPI3 329 aa15.12■□□□□ 0.01
ATG4B-225ENST00000494465 SLC35F1Q5T1Q4 408 aa15.12■□□□□ 0.01
ATG4B-225ENST00000494465 C16orf47Q6ZP98 133 aaPredicted RBP15.12■□□□□ 0.01
ATG4B-225ENST00000494465 AGBL5Q8NDL9 886 aa15.12■□□□□ 0.01
ATG4B-225ENST00000494465 DYNC2LI1Q8TCX1 351 aa15.12■□□□□ 0.01
ATG4B-225ENST00000494465 LAT2Q9GZY6 243 aa15.12■□□□□ 0.01
ATG4B-225ENST00000494465 GPR179Q6PRD1 2367 aa15.11■□□□□ 0.01
ATG4B-225ENST00000494465 LRRN3E7EW58 273 aa15.11■□□□□ 0.01
ATG4B-225ENST00000494465 GTPBP1O00178 669 aaKnown RBP15.11■□□□□ 0.01
ATG4B-225ENST00000494465 SOCS6O14544 535 aa15.11■□□□□ 0.01
ATG4B-225ENST00000494465 ACP1P24666 158 aa15.11■□□□□ 0.01
ATG4B-225ENST00000494465 HTR1FP30939 366 aa15.11■□□□□ 0.01
ATG4B-225ENST00000494465 CCR4P51679 360 aa15.11■□□□□ 0.01
ATG4B-225ENST00000494465 TSTQ16762 297 aaKnown RBP15.11■□□□□ 0.01
ATG4B-225ENST00000494465 TMEM44Q2T9K0 475 aa15.11■□□□□ 0.01
ATG4B-225ENST00000494465 MARCH3Q86UD3 253 aa15.11■□□□□ 0.01
ATG4B-225ENST00000494465 ZBTB46Q86UZ6 589 aa15.11■□□□□ 0.01
ATG4B-225ENST00000494465 LRRC17Q8N6Y2 441 aa15.11■□□□□ 0.01
ATG4B-225ENST00000494465 RFKQ969G6 155 aa15.11■□□□□ 0.01
ATG4B-225ENST00000494465 PMEPA1Q969W9 287 aa15.11■□□□□ 0.01
ATG4B-225ENST00000494465 TP53INP1Q96A56 240 aa15.11■□□□□ 0.01
ATG4B-225ENST00000494465 IFT27Q9BW83 186 aa15.11■□□□□ 0.01
ATG4B-225ENST00000494465 OR51E2Q9H255 320 aa15.11■□□□□ 0.01
ATG4B-225ENST00000494465 FN3KQ9H479 309 aa15.11■□□□□ 0.01
ATG4B-225ENST00000494465 CMC2Q9NRP2 79 aa15.11■□□□□ 0.01
ATG4B-225ENST00000494465 RXFP3Q9NSD7 469 aa15.11■□□□□ 0.01
ATG4B-225ENST00000494465 PCDHGA3Q9Y5H0 932 aa15.11■□□□□ 0.01
ATG4B-225ENST00000494465 ZNF354AO60765 605 aaPredicted RBP15.11■□□□□ 0.01
ATG4B-225ENST00000494465 CPNE3O75131 537 aaKnown RBP15.11■□□□□ 0.01
ATG4B-225ENST00000494465 CLPXO76031 633 aa15.11■□□□□ 0.01
ATG4B-225ENST00000494465 LDOC1O95751 146 aaPredicted RBP15.11■□□□□ 0.01
ATG4B-225ENST00000494465 SCG5P05408 212 aa15.11■□□□□ 0.01
ATG4B-225ENST00000494465 GP1BAP07359 652 aa15.11■□□□□ 0.01
ATG4B-225ENST00000494465 INHBBP09529 407 aa15.11■□□□□ 0.01
ATG4B-225ENST00000494465 PAPD4Q6PIY7 484 aaKnown RBP15.11■□□□□ 0.01
ATG4B-225ENST00000494465 TMEM205Q6UW68 189 aa15.11■□□□□ 0.01
ATG4B-225ENST00000494465 CXXC5Q7LFL8 322 aaKnown RBP15.11■□□□□ 0.01
ATG4B-225ENST00000494465 SHFQ7M4L6 423 aa15.11■□□□□ 0.01
ATG4B-225ENST00000494465 TMCO5AQ8N6Q1 288 aa15.11■□□□□ 0.01
ATG4B-225ENST00000494465 METTL21AQ8WXB1 218 aa15.11■□□□□ 0.01
ATG4B-225ENST00000494465 SGTBQ96EQ0 304 aa15.11■□□□□ 0.01
ATG4B-225ENST00000494465 CCNL2Q96S94 520 aaPredicted RBP15.11■□□□□ 0.01
ATG4B-225ENST00000494465 HCAR1Q9BXC0 346 aa15.11■□□□□ 0.01
ATG4B-225ENST00000494465 IRGMA1A4Y4 181 aa15.1■□□□□ 0.01
ATG4B-225ENST00000494465 TMEM200CA6NKL6 621 aa15.1■□□□□ 0.01
ATG4B-225ENST00000494465 FADS1O60427 444 aa15.1■□□□□ 0.01
ATG4B-225ENST00000494465 AVPR2P30518 371 aa15.1■□□□□ 0.01
ATG4B-225ENST00000494465 SOWAHCQ53LP3 525 aaPredicted RBP15.1■□□□□ 0.01
ATG4B-225ENST00000494465 PLBD1Q6P4A8 553 aa15.1■□□□□ 0.01
ATG4B-225ENST00000494465 RTL4Q6ZR62 310 aa15.1■□□□□ 0.01
ATG4B-225ENST00000494465 SH3YL1Q96HL8 342 aaPredicted RBP15.1■□□□□ 0.01
ATG4B-225ENST00000494465 CRB3Q9BUF7 120 aa15.1■□□□□ 0.01
ATG4B-225ENST00000494465 SLC19A3Q9BZV2 496 aa15.1■□□□□ 0.01
ATG4B-225ENST00000494465 MED20Q9H944 212 aa15.1■□□□□ 0.01
ATG4B-225ENST00000494465 PCDHGB2Q9Y5G2 931 aa15.1■□□□□ 0.01
ATG4B-225ENST00000494465 PMF1-BGLAPU3KQ54 211 aa15.1■□□□□ 0.01
ATG4B-225ENST00000494465 LNP1A1A4G5 178 aa15.1■□□□□ 0.01
ATG4B-225ENST00000494465 OR6C70A6NIJ9 312 aa15.1■□□□□ 0.01
ATG4B-225ENST00000494465 CCRL2O00421 344 aa15.1■□□□□ 0.01
ATG4B-225ENST00000494465 KHNYNO15037 678 aaKnown RBP15.1■□□□□ 0.01
ATG4B-225ENST00000494465 PPP1R3DO95685 299 aa15.1■□□□□ 0.01
ATG4B-225ENST00000494465 PNMTP11086 282 aa15.1■□□□□ 0.01
ATG4B-225ENST00000494465 ENTPD1P49961 510 aa15.1■□□□□ 0.01
ATG4B-225ENST00000494465 MC2RQ01718 297 aa15.1■□□□□ 0.01
ATG4B-225ENST00000494465 DBPQ10586 325 aaPredicted RBP15.1■□□□□ 0.01
ATG4B-225ENST00000494465 NIPAL3Q6P499 406 aa15.1■□□□□ 0.01
ATG4B-225ENST00000494465 CPEB2Q7Z5Q1 589 aaKnown RBP15.1■□□□□ 0.01
ATG4B-225ENST00000494465 OR4F15Q8NGB8 312 aa15.1■□□□□ 0.01
ATG4B-225ENST00000494465 PTP4A1Q93096 173 aa15.1■□□□□ 0.01
ATG4B-225ENST00000494465 ZNF649Q9BS31 505 aa15.1■□□□□ 0.01
ATG4B-225ENST00000494465 ZBTB20Q9HC78 741 aaPredicted RBP15.1■□□□□ 0.01
ATG4B-225ENST00000494465 EXOGQ9Y2C4 368 aaKnown RBP15.1■□□□□ 0.01
ATG4B-225ENST00000494465 LIMS3P0CW19 117 aa15.09■□□□□ 0.01
ATG4B-225ENST00000494465 LIMS4P0CW20 117 aa15.09■□□□□ 0.01
ATG4B-225ENST00000494465 SOX3P41225 446 aa15.09■□□□□ 0.01
ATG4B-225ENST00000494465 EGR4Q05215 589 aa15.09■□□□□ 0.01
ATG4B-225ENST00000494465 PLA2G2CQ5R387 149 aa15.09■□□□□ 0.01
ATG4B-225ENST00000494465 FAM69BQ5VUD6 431 aa15.09■□□□□ 0.01
ATG4B-225ENST00000494465 FCRLBQ6BAA4 426 aa15.09■□□□□ 0.01
ATG4B-225ENST00000494465 SLC43A2Q8N370 569 aa15.09■□□□□ 0.01
ATG4B-225ENST00000494465 NUBPLQ8TB37 319 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms