RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 ZFP62Q8NB50 900 aaPredicted RBP17.56■□□□□ 0.4
USP39-218ENST00000493829 ATP6V1C2Q8NEY4 427 aa17.56■□□□□ 0.4
USP39-218ENST00000493829 ST8SIA1Q92185 356 aa17.56■□□□□ 0.4
USP39-218ENST00000493829 DNAJA3Q96EY1 480 aa17.56■□□□□ 0.4
USP39-218ENST00000493829 UBL7Q96S82 380 aaPredicted RBP17.56■□□□□ 0.4
USP39-218ENST00000493829 BARD1Q99728 777 aaKnown RBP17.56■□□□□ 0.4
USP39-218ENST00000493829 UBQLN3Q9H347 655 aa17.56■□□□□ 0.4
USP39-218ENST00000493829 TMEM185BQ9H7F4 350 aa17.56■□□□□ 0.4
USP39-218ENST00000493829 STX18Q9P2W9 335 aaKnown RBP17.56■□□□□ 0.4
USP39-218ENST00000493829 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.55■□□□□ 0.4
USP39-218ENST00000493829 ELOA3DA6NLF2 546 aaPredicted RBP17.55■□□□□ 0.4
USP39-218ENST00000493829 CHP2O43745 196 aa17.55■□□□□ 0.4
USP39-218ENST00000493829 PIP5K1CO60331 668 aa17.55■□□□□ 0.4
USP39-218ENST00000493829 GLSO94925 669 aaPredicted RBP17.55■□□□□ 0.4
USP39-218ENST00000493829 ZNF23P17027 643 aa17.55■□□□□ 0.4
USP39-218ENST00000493829 IL11P20809 199 aa17.55■□□□□ 0.4
USP39-218ENST00000493829 LSM11P83369 360 aaKnown RBP eCLIP17.55■□□□□ 0.4
USP39-218ENST00000493829 RIPK1Q13546 671 aa17.55■□□□□ 0.4
USP39-218ENST00000493829 ELOA3BQ3SY89 546 aa17.55■□□□□ 0.4
USP39-218ENST00000493829 PLEKHN1Q494U1 663 aaPredicted RBP17.55■□□□□ 0.4
USP39-218ENST00000493829 WIPI1Q5MNZ9 446 aaPredicted RBP17.55■□□□□ 0.4
USP39-218ENST00000493829 TBPL2Q6SJ96 375 aa17.55■□□□□ 0.4
USP39-218ENST00000493829 GRINAQ7Z429 371 aa17.55■□□□□ 0.4
USP39-218ENST00000493829 FAM83FQ8NEG4 500 aaPredicted RBP17.55■□□□□ 0.4
USP39-218ENST00000493829 ELOA3Q8NG57 546 aa17.55■□□□□ 0.4
USP39-218ENST00000493829 POC1BQ8TC44 478 aa17.55■□□□□ 0.4
USP39-218ENST00000493829 DNAJA4Q8WW22 397 aaPredicted RBP17.55■□□□□ 0.4
USP39-218ENST00000493829 NR4A3Q92570 626 aa17.55■□□□□ 0.4
USP39-218ENST00000493829 CENPNQ96H22 339 aaPredicted RBP17.55■□□□□ 0.4
USP39-218ENST00000493829 ALPK1Q96QP1 1244 aa17.55■□□□□ 0.4
USP39-218ENST00000493829 BDH2Q9BUT1 245 aa17.55■□□□□ 0.4
USP39-218ENST00000493829 POLR2J2Q9GZM3 115 aaKnown RBP17.55■□□□□ 0.4
USP39-218ENST00000493829 POLR2J3Q9H1A7 115 aaKnown RBP17.55■□□□□ 0.4
USP39-218ENST00000493829 ADNPQ9H2P0 1102 aa17.55■□□□□ 0.4
USP39-218ENST00000493829 OSGIN1Q9UJX0 560 aa17.55■□□□□ 0.4
USP39-218ENST00000493829 PCDHGB6Q9Y5F9 930 aa17.55■□□□□ 0.4
USP39-218ENST00000493829 MAGED1Q9Y5V3 778 aaPredicted RBP17.55■□□□□ 0.4
USP39-218ENST00000493829 PKD1L2Q7Z442 2459 aa17.55■□□□□ 0.4
USP39-218ENST00000493829 ACOT7O00154 380 aa17.55■□□□□ 0.4
USP39-218ENST00000493829 RASAL1O95294 804 aa17.55■□□□□ 0.4
USP39-218ENST00000493829 ZNF24P17028 368 aa17.55■□□□□ 0.4
USP39-218ENST00000493829 SRD5A2P31213 254 aa17.55■□□□□ 0.4
USP39-218ENST00000493829 POLR2HP52434 150 aaKnown RBP17.55■□□□□ 0.4
USP39-218ENST00000493829 SEC23BQ15437 767 aa17.55■□□□□ 0.4
USP39-218ENST00000493829 TRIP10Q15642 601 aa17.55■□□□□ 0.4
USP39-218ENST00000493829 PODNL1Q6PEZ8 512 aa17.55■□□□□ 0.4
USP39-218ENST00000493829 ATG4DQ86TL0 474 aaPredicted RBP17.55■□□□□ 0.4
USP39-218ENST00000493829 SLC22A16Q86VW1 577 aa17.55■□□□□ 0.4
USP39-218ENST00000493829 MEX3DQ86XN8 651 aaKnown RBP17.55■□□□□ 0.4
USP39-218ENST00000493829 OR4C15Q8NGM1 316 aa17.55■□□□□ 0.4
USP39-218ENST00000493829 SLC7A13Q8TCU3 470 aa17.55■□□□□ 0.4
USP39-218ENST00000493829 DHRS1Q96LJ7 313 aa17.55■□□□□ 0.4
USP39-218ENST00000493829 PRSS27Q9BQR3 290 aa17.55■□□□□ 0.4
USP39-218ENST00000493829 C6orf203Q9P0P8 240 aaPredicted RBP17.55■□□□□ 0.4
USP39-218ENST00000493829 TUBD1Q9UJT1 453 aa17.55■□□□□ 0.4
USP39-218ENST00000493829 OAZ3Q9UMX2 235 aa17.55■□□□□ 0.4
USP39-218ENST00000493829 A0A087WZY1 265 aa17.54■□□□□ 0.4
USP39-218ENST00000493829 TMED7-TICAM2A0A0A6YYA0 188 aa17.54■□□□□ 0.4
USP39-218ENST00000493829 A0A1W2PRQ8 180 aa17.54■□□□□ 0.4
USP39-218ENST00000493829 TFECO14948 347 aaPredicted RBP17.54■□□□□ 0.4
USP39-218ENST00000493829 ZIC3O60481 467 aa17.54■□□□□ 0.4
USP39-218ENST00000493829 OPN1LWP04000 364 aa17.54■□□□□ 0.4
USP39-218ENST00000493829 PEPDP12955 493 aa17.54■□□□□ 0.4
USP39-218ENST00000493829 CXCR1P25024 350 aa17.54■□□□□ 0.4
USP39-218ENST00000493829 DGCR6Q14129 220 aa17.54■□□□□ 0.4
USP39-218ENST00000493829 LRRC36Q1X8D7 754 aa17.54■□□□□ 0.4
USP39-218ENST00000493829 ZNF730Q6ZMV8 503 aa17.54■□□□□ 0.4
USP39-218ENST00000493829 SMPDL3BQ92485 455 aa17.54■□□□□ 0.4
USP39-218ENST00000493829 ZBTB8AQ96BR9 441 aa17.54■□□□□ 0.4
USP39-218ENST00000493829 EPYCQ99645 322 aa17.54■□□□□ 0.4
USP39-218ENST00000493829 CIB1Q99828 191 aa17.54■□□□□ 0.4
USP39-218ENST00000493829 ADAM19Q9H013 955 aa17.54■□□□□ 0.4
USP39-218ENST00000493829 SLC6A15Q9H2J7 730 aa17.54■□□□□ 0.4
USP39-218ENST00000493829 TMCC3Q9ULS5 477 aa17.54■□□□□ 0.4
USP39-218ENST00000493829 TMED7Q9Y3B3 224 aa17.54■□□□□ 0.4
USP39-218ENST00000493829 PIEZO2Q9H5I5 2752 aa17.53■□□□□ 0.4
USP39-218ENST00000493829 TMEM72A0PK05 275 aa17.53■□□□□ 0.4
USP39-218ENST00000493829 PDLIM1O00151 329 aa17.53■□□□□ 0.4
USP39-218ENST00000493829 SUSD5O60279 629 aa17.53■□□□□ 0.4
USP39-218ENST00000493829 PEX2P28328 305 aa17.53■□□□□ 0.4
USP39-218ENST00000493829 UGT2B15P54855 530 aa17.53■□□□□ 0.4
USP39-218ENST00000493829 SMIM11AP58511 58 aa17.53■□□□□ 0.4
USP39-218ENST00000493829 SLC34A1Q06495 639 aa17.53■□□□□ 0.4
USP39-218ENST00000493829 LY6DQ14210 128 aa17.53■□□□□ 0.4
USP39-218ENST00000493829 DCST1Q5T197 706 aa17.53■□□□□ 0.4
USP39-218ENST00000493829 LPCAT4Q643R3 524 aa17.53■□□□□ 0.4
USP39-218ENST00000493829 EPHX4Q8IUS5 362 aa17.53■□□□□ 0.4
USP39-218ENST00000493829 OR9Q2Q8NGE9 314 aa17.53■□□□□ 0.4
USP39-218ENST00000493829 PFN4Q8NHR9 129 aa17.53■□□□□ 0.4
USP39-218ENST00000493829 SLC38A4Q969I6 547 aa17.53■□□□□ 0.4
USP39-218ENST00000493829 MRGPRX4Q96LA9 322 aa17.53■□□□□ 0.4
USP39-218ENST00000493829 TAAR6Q96RI8 345 aa17.53■□□□□ 0.4
USP39-218ENST00000493829 DEFB127Q9H1M4 99 aa17.53■□□□□ 0.4
USP39-218ENST00000493829 LIPGQ9Y5X9 500 aa17.53■□□□□ 0.4
USP39-218ENST00000493829 OR2M5A3KFT3 312 aa17.52■□□□□ 0.4
USP39-218ENST00000493829 H3BML4 177 aa17.52■□□□□ 0.4
USP39-218ENST00000493829 CCNB2O95067 398 aa17.52■□□□□ 0.4
USP39-218ENST00000493829 THRBP10828 461 aa17.52■□□□□ 0.4
USP39-218ENST00000493829 PNMTP11086 282 aa17.52■□□□□ 0.4
USP39-218ENST00000493829 FPR1P21462 350 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms