RNA–Protein interactions for RNA: ENST00000493610.2

PDCD11-206, Transcript of programmed cell death 11, humanhuman

TSL 5

Gene PDCD11, Length 732 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-206ENST00000493610 RUNDC3AQ59EK9 446 aa12.17□□□□□ -0.46
PDCD11-206ENST00000493610 EEF1A1P5Q5VTE0 462 aa12.17□□□□□ -0.46
PDCD11-206ENST00000493610 NUFIP2Q7Z417 695 aaKnown RBP12.17□□□□□ -0.46
PDCD11-206ENST00000493610 ARFGAP2Q8N6H7 521 aa12.17□□□□□ -0.46
PDCD11-206ENST00000493610 OR52P1PQ8NH57 321 aa12.17□□□□□ -0.46
PDCD11-206ENST00000493610 FAM222BQ8WU58 562 aa12.17□□□□□ -0.46
PDCD11-206ENST00000493610 ZNF317Q96PQ6 595 aaPredicted RBP12.17□□□□□ -0.46
PDCD11-206ENST00000493610 GPATCH1Q9BRR8 931 aaKnown RBP12.17□□□□□ -0.46
PDCD11-206ENST00000493610 OR11A1Q9GZK7 315 aa12.17□□□□□ -0.46
PDCD11-206ENST00000493610 ADAM19Q9H013 955 aa12.17□□□□□ -0.46
PDCD11-206ENST00000493610 LIME1Q9H400 295 aa12.17□□□□□ -0.46
PDCD11-206ENST00000493610 RASSF1Q9NS23 344 aa12.17□□□□□ -0.46
PDCD11-206ENST00000493610 OSGIN1Q9UJX0 560 aa12.17□□□□□ -0.46
PDCD11-206ENST00000493610 ZNF443Q9Y2A4 671 aaPredicted RBP12.17□□□□□ -0.46
PDCD11-206ENST00000493610 TESMINQ9Y4I5 508 aa12.17□□□□□ -0.46
PDCD11-206ENST00000493610 PRR14LQ5THK1 2151 aa12.17□□□□□ -0.46
PDCD11-206ENST00000493610 UQCRHLA0A096LP55 91 aa12.16□□□□□ -0.46
PDCD11-206ENST00000493610 A0A0G2JND7 137 aa12.16□□□□□ -0.46
PDCD11-206ENST00000493610 A0A0G2JPF8 293 aa12.16□□□□□ -0.46
PDCD11-206ENST00000493610 TMEM72A0PK05 275 aa12.16□□□□□ -0.46
PDCD11-206ENST00000493610 ZC3H12DA2A288 527 aaKnown RBP12.16□□□□□ -0.46
PDCD11-206ENST00000493610 TUBAL3A6NHL2 446 aa12.16□□□□□ -0.46
PDCD11-206ENST00000493610 HNRNPCL2B2RXH8 293 aa12.16□□□□□ -0.46
PDCD11-206ENST00000493610 HNRNPCL3B7ZW38 293 aa12.16□□□□□ -0.46
PDCD11-206ENST00000493610 HNRNPCL1O60812 293 aaKnown RBP12.16□□□□□ -0.46
PDCD11-206ENST00000493610 RAMP1O60894 148 aa12.16□□□□□ -0.46
PDCD11-206ENST00000493610 PGM3O95394 542 aa12.16□□□□□ -0.46
PDCD11-206ENST00000493610 THBS1P07996 1170 aa12.16□□□□□ -0.46
PDCD11-206ENST00000493610 HNRNPCL4P0DMR1 293 aa12.16□□□□□ -0.46
PDCD11-206ENST00000493610 EPXP11678 715 aa12.16□□□□□ -0.46
PDCD11-206ENST00000493610 NCF2P19878 526 aaPredicted RBP12.16□□□□□ -0.46
PDCD11-206ENST00000493610 ME2P23368 584 aa12.16□□□□□ -0.46
PDCD11-206ENST00000493610 LOXP28300 417 aaPredicted RBP12.16□□□□□ -0.46
PDCD11-206ENST00000493610 NTF4P34130 210 aa12.16□□□□□ -0.46
PDCD11-206ENST00000493610 CD79BP40259 229 aa12.16□□□□□ -0.46
PDCD11-206ENST00000493610 APOBEC1P41238 236 aaKnown RBP12.16□□□□□ -0.46
PDCD11-206ENST00000493610 CRISP3P54108 245 aa12.16□□□□□ -0.46
PDCD11-206ENST00000493610 RAC3P60763 192 aa12.16□□□□□ -0.46
PDCD11-206ENST00000493610 HPCAP84074 193 aa12.16□□□□□ -0.46
PDCD11-206ENST00000493610 SF3A3Q12874 501 aaKnown RBP eCLIP12.16□□□□□ -0.46
PDCD11-206ENST00000493610 TESK1Q15569 626 aa12.16□□□□□ -0.46
PDCD11-206ENST00000493610 SYT14P1Q58G82 188 aa12.16□□□□□ -0.46
PDCD11-206ENST00000493610 RNF220Q5VTB9 566 aa12.16□□□□□ -0.46
PDCD11-206ENST00000493610 PRAMEF8Q5VWM4 474 aa12.16□□□□□ -0.46
PDCD11-206ENST00000493610 PRAMEF7Q5VXH5 474 aa12.16□□□□□ -0.46
PDCD11-206ENST00000493610 C3orf33Q6P1S2 294 aa12.16□□□□□ -0.46
PDCD11-206ENST00000493610 TMPPEQ6ZT21 453 aa12.16□□□□□ -0.46
PDCD11-206ENST00000493610 GRINAQ7Z429 371 aa12.16□□□□□ -0.46
PDCD11-206ENST00000493610 PTOV1Q86YD1 416 aa12.16□□□□□ -0.46
PDCD11-206ENST00000493610 OR6K3Q8NGY3 331 aa12.16□□□□□ -0.46
PDCD11-206ENST00000493610 CPNE4Q96A23 557 aaPredicted RBP12.16□□□□□ -0.46
PDCD11-206ENST00000493610 DNAJA3Q96EY1 480 aa12.16□□□□□ -0.46
PDCD11-206ENST00000493610 WFIKKN1Q96NZ8 548 aa12.16□□□□□ -0.46
PDCD11-206ENST00000493610 PSD2Q9BQI7 771 aa12.16□□□□□ -0.46
PDCD11-206ENST00000493610 WFDC6Q9BQY6 131 aa12.16□□□□□ -0.46
PDCD11-206ENST00000493610 SIKE1Q9BRV8 207 aa12.16□□□□□ -0.46
PDCD11-206ENST00000493610 STOML1Q9UBI4 398 aa12.16□□□□□ -0.46
PDCD11-206ENST00000493610 MCTS1Q9ULC4 181 aaKnown RBP12.16□□□□□ -0.46
PDCD11-206ENST00000493610 FXYD1O00168 92 aa12.15□□□□□ -0.46
PDCD11-206ENST00000493610 FRS3O43559 492 aa12.15□□□□□ -0.46
PDCD11-206ENST00000493610 TPST1O60507 370 aa12.15□□□□□ -0.46
PDCD11-206ENST00000493610 SYNGR4O95473 234 aa12.15□□□□□ -0.46
PDCD11-206ENST00000493610 THBDP07204 575 aa12.15□□□□□ -0.46
PDCD11-206ENST00000493610 PABPC4LP0CB38 370 aaKnown RBP12.15□□□□□ -0.46
PDCD11-206ENST00000493610 IMPDH2P12268 514 aa12.15□□□□□ -0.46
PDCD11-206ENST00000493610 IL7RP16871 459 aa12.15□□□□□ -0.46
PDCD11-206ENST00000493610 UGT2B10P36537 528 aa12.15□□□□□ -0.46
PDCD11-206ENST00000493610 CPOXP36551 454 aa12.15□□□□□ -0.46
PDCD11-206ENST00000493610 PEX19P40855 299 aa12.15□□□□□ -0.46
PDCD11-206ENST00000493610 DIO1P49895 249 aa12.15□□□□□ -0.46
PDCD11-206ENST00000493610 GZMMP51124 257 aa12.15□□□□□ -0.46
PDCD11-206ENST00000493610 GLIPR1L2Q4G1C9 344 aa12.15□□□□□ -0.46
PDCD11-206ENST00000493610 METTL21CQ5VZV1 264 aa12.15□□□□□ -0.46
PDCD11-206ENST00000493610 ABLIM2Q6H8Q1 611 aa12.15□□□□□ -0.46
PDCD11-206ENST00000493610 TFAP2EQ6VUC0 442 aa12.15□□□□□ -0.46
PDCD11-206ENST00000493610 FCRLAQ7L513 359 aa12.15□□□□□ -0.46
PDCD11-206ENST00000493610 SERPINA11Q86U17 422 aa12.15□□□□□ -0.46
PDCD11-206ENST00000493610 KIF18BQ86Y91 864 aa12.15□□□□□ -0.46
PDCD11-206ENST00000493610 TUSC5Q8IXB3 177 aa12.15□□□□□ -0.46
PDCD11-206ENST00000493610 PEX5LQ8IYB4 626 aa12.15□□□□□ -0.46
PDCD11-206ENST00000493610 NFKBIDQ8NI38 313 aa12.15□□□□□ -0.46
PDCD11-206ENST00000493610 TMEM234Q8WY98 164 aa12.15□□□□□ -0.46
PDCD11-206ENST00000493610 OR5B2Q96R09 309 aa12.15□□□□□ -0.46
PDCD11-206ENST00000493610 ZNF300Q96RE9 604 aaPredicted RBP12.15□□□□□ -0.46
PDCD11-206ENST00000493610 SPATA9Q9BWV2 254 aa12.15□□□□□ -0.46
PDCD11-206ENST00000493610 TMEM38AQ9H6F2 299 aa12.15□□□□□ -0.46
PDCD11-206ENST00000493610 BCO1Q9HAY6 547 aa12.15□□□□□ -0.46
PDCD11-206ENST00000493610 CALML5Q9NZT1 146 aa12.15□□□□□ -0.46
PDCD11-206ENST00000493610 KLHL13Q9P2N7 655 aa12.15□□□□□ -0.46
PDCD11-206ENST00000493610 CHRNA9Q9UGM1 479 aa12.15□□□□□ -0.46
PDCD11-206ENST00000493610 MYO9AB2RTY4 2548 aa12.15□□□□□ -0.46
PDCD11-206ENST00000493610 CREBBPQ92793 2442 aa12.15□□□□□ -0.47
PDCD11-206ENST00000493610 SPG11Q96JI7 2443 aa12.15□□□□□ -0.47
PDCD11-206ENST00000493610 TMED7-TICAM2A0A0A6YYA0 188 aa12.14□□□□□ -0.47
PDCD11-206ENST00000493610 SH3D21A4FU49 640 aa12.14□□□□□ -0.47
PDCD11-206ENST00000493610 CFAP73A6NFT4 308 aa12.14□□□□□ -0.47
PDCD11-206ENST00000493610 GJE1A6NN92 205 aa12.14□□□□□ -0.47
PDCD11-206ENST00000493610 ZNF716A6NP11 495 aa12.14□□□□□ -0.47
PDCD11-206ENST00000493610 DEFB108AA8MXU0 73 aa12.14□□□□□ -0.47
PDCD11-206ENST00000493610 CYTIPO60759 359 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms