RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 IL5P05113 134 aa10.84□□□□□ -0.67
HDAC4-210ENST00000493582 GYPBP06028 91 aa10.84□□□□□ -0.67
HDAC4-210ENST00000493582 GP1BAP07359 652 aa10.84□□□□□ -0.67
HDAC4-210ENST00000493582 PRG2P13727 222 aa10.84□□□□□ -0.67
HDAC4-210ENST00000493582 ADCYAP1P18509 176 aa10.84□□□□□ -0.67
HDAC4-210ENST00000493582 FPR3P25089 353 aa10.84□□□□□ -0.67
HDAC4-210ENST00000493582 MAGEB1P43366 347 aa10.84□□□□□ -0.67
HDAC4-210ENST00000493582 ST3GAL3Q11203 375 aa10.84□□□□□ -0.67
HDAC4-210ENST00000493582 LASP1Q14847 261 aaKnown RBP10.84□□□□□ -0.67
HDAC4-210ENST00000493582 TP53I3Q53FA7 332 aa10.84□□□□□ -0.67
HDAC4-210ENST00000493582 ZNF311Q5JNZ3 666 aa10.84□□□□□ -0.67
HDAC4-210ENST00000493582 DMKNQ6E0U4 476 aaPredicted RBP10.84□□□□□ -0.67
HDAC4-210ENST00000493582 OR2AK2Q8NG84 335 aa10.84□□□□□ -0.67
HDAC4-210ENST00000493582 OR2AP1Q8NGE2 309 aa10.84□□□□□ -0.67
HDAC4-210ENST00000493582 KISS1RQ969F8 398 aaPredicted RBP10.84□□□□□ -0.67
HDAC4-210ENST00000493582 ZNF75AQ96N20 296 aa10.84□□□□□ -0.67
HDAC4-210ENST00000493582 NRTNQ99748 197 aa10.84□□□□□ -0.67
HDAC4-210ENST00000493582 AKAP7Q9P0M2 348 aaPredicted RBP10.84□□□□□ -0.67
HDAC4-210ENST00000493582 A0A1B0GW55 424 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 ANKRD20A5PA0PJZ0 165 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 GLOD5A6NK44 160 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 TBX6O95947 436 aaPredicted RBP10.83□□□□□ -0.68
HDAC4-210ENST00000493582 DUX4L2P0CJ85 424 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 DUX4L3P0CJ86 424 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 DUX4L4P0CJ87 422 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 DUX4L5P0CJ88 424 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 DUX4L6P0CJ89 424 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 DUX4L7P0CJ90 424 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 NRG3P56975 720 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 SNRPEP62304 92 aaKnown RBP10.83□□□□□ -0.68
HDAC4-210ENST00000493582 ZNF85Q03923 595 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 TRAM1Q15629 374 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 PRPF38BQ5VTL8 546 aaKnown RBP10.83□□□□□ -0.68
HDAC4-210ENST00000493582 NXPE4Q6UWF7 544 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 BAIAP2L2Q6UXY1 529 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 MOB3CQ70IA8 216 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.83□□□□□ -0.68
HDAC4-210ENST00000493582 SVBPQ8N300 66 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 C1orf216Q8TAB5 229 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 THAP6Q8TBB0 222 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 TNFAIP8L1Q8WVP5 186 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 SLC25A38Q96DW6 304 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 TEAD3Q99594 435 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 TMEM185BQ9H7F4 350 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 PLEKHA1Q9HB21 404 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 NIT2Q9NQR4 276 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 DUX4Q9UBX2 424 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 TRAV1-2A0A0B4J238 106 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 TMEM218A2RU14 115 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 SYNDIG1LA6NDD5 238 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 PTH2RP49190 550 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 P2RX1P51575 399 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 LUMP51884 338 aaPredicted RBP10.83□□□□□ -0.68
HDAC4-210ENST00000493582 MICBQ29980 383 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 GID4Q8IVV7 300 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 CFAP206Q8IYR0 622 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 RASGEF1AQ8N9B8 481 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 CYB561A3Q8NBI2 242 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 DNAAF1Q8NEP3 725 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 C16orf58Q96GQ5 468 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 SLC25A18Q9H1K4 315 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 SUV39H2Q9H5I1 410 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 ZDHHC6Q9H6R6 413 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 SPHK1Q9NYA1 384 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 ZNF230Q9UIE0 474 aaPredicted RBP10.83□□□□□ -0.68
HDAC4-210ENST00000493582 SLC13A4Q9UKG4 626 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 DOCK3Q8IZD9 2030 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 PDE4DIPQ5VU43 2346 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 TMEM272A0A1B0GTI8 110 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 FAM25EA8MYX2 175 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 SMAD9O15198 467 aaKnown RBP10.83□□□□□ -0.68
HDAC4-210ENST00000493582 YKT6O15498 198 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 PRKRAO75569 313 aaKnown RBP10.83□□□□□ -0.68
HDAC4-210ENST00000493582 C1orf105O95561 183 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 SYN1P17600 705 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 PNLIPRP1P54315 467 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 RTP2Q5QGT7 225 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 HENMT1Q5T8I9 393 aaKnown RBP10.83□□□□□ -0.68
HDAC4-210ENST00000493582 TSSK4Q6SA08 328 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 SLC36A1Q7Z2H8 476 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 C11orf96Q7Z7L8 435 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 ZNF546Q86UE3 836 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 TMEM151BQ8IW70 566 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 AMER3Q8N944 861 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 OR1S2Q8NGQ3 325 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 ACOT11Q8WXI4 607 aaPredicted RBP10.83□□□□□ -0.68
HDAC4-210ENST00000493582 SMPDL3BQ92485 455 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 IL17FQ96PD4 163 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 MNTQ99583 582 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 PDCD1LG2Q9BQ51 273 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 FKRPQ9H9S5 495 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 HCSTQ9UBK5 93 aa10.83□□□□□ -0.68
HDAC4-210ENST00000493582 SULT1C2O00338 296 aa10.82□□□□□ -0.68
HDAC4-210ENST00000493582 KPNA3O00505 521 aaPredicted RBP10.82□□□□□ -0.68
HDAC4-210ENST00000493582 ADAM12O43184 909 aa10.82□□□□□ -0.68
HDAC4-210ENST00000493582 EIF4E2O60573 245 aaKnown RBP10.82□□□□□ -0.68
HDAC4-210ENST00000493582 RNGTTO60942 597 aaKnown RBP10.82□□□□□ -0.68
HDAC4-210ENST00000493582 IL9P15248 144 aa10.82□□□□□ -0.68
HDAC4-210ENST00000493582 RPA2P15927 270 aa10.82□□□□□ -0.68
HDAC4-210ENST00000493582 TYRP1P17643 537 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms