RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 CDC14CA4D256 554 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 FAM86C2PA6NEL3 165 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 M0R3G1 203 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 EIF4E2O60573 245 aaKnown RBP12.86□□□□□ -0.35
PTPN7-216ENST00000492977 HSMCR30P0CW71 290 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 AVPR2P30518 371 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 SLC9A3P48764 834 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 MLLT10P55197 1068 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 CDH11P55287 796 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 NRG3P56975 720 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 SPHARQ15513 63 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 DESI1Q6ICB0 168 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 SLCO6A1Q86UG4 719 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 GID4Q8IVV7 300 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 APCDD1LQ8NCL9 501 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 NUBPLQ8TB37 319 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 LRFN5Q96NI6 719 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 SPSB2Q99619 263 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 IFT27Q9BW83 186 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 ENKD1Q9H0I2 346 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 SMOC1Q9H4F8 434 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 WDR54Q9H977 334 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 C12orf10Q9HB07 376 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 FBXO8Q9NRD0 319 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 CMC2Q9NRP2 79 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 RXFP3Q9NSD7 469 aa12.86□□□□□ -0.35
PTPN7-216ENST00000492977 CHCHD3Q9NX63 227 aaKnown RBP12.86□□□□□ -0.35
PTPN7-216ENST00000492977 C19orf25Q9UFG5 118 aaPredicted RBP12.86□□□□□ -0.35
PTPN7-216ENST00000492977 NXT1Q9UKK6 140 aaKnown RBP12.86□□□□□ -0.35
PTPN7-216ENST00000492977 TRAV27A0A087WT01 109 aa12.85□□□□□ -0.35
PTPN7-216ENST00000492977 IGHV3-20A0A0C4DH32 117 aa12.85□□□□□ -0.35
PTPN7-216ENST00000492977 OR6C70A6NIJ9 312 aa12.85□□□□□ -0.35
PTPN7-216ENST00000492977 ELOA3DA6NLF2 546 aaPredicted RBP12.85□□□□□ -0.35
PTPN7-216ENST00000492977 FLRT2O43155 660 aa12.85□□□□□ -0.35
PTPN7-216ENST00000492977 OIP5O43482 229 aa12.85□□□□□ -0.35
PTPN7-216ENST00000492977 NDUFB5O43674 189 aa12.85□□□□□ -0.35
PTPN7-216ENST00000492977 AIREO43918 545 aa12.85□□□□□ -0.35
PTPN7-216ENST00000492977 SCG5P05408 212 aa12.85□□□□□ -0.35
PTPN7-216ENST00000492977 CDK4P11802 303 aa12.85□□□□□ -0.35
PTPN7-216ENST00000492977 MYL12AP19105 171 aa12.85□□□□□ -0.35
PTPN7-216ENST00000492977 HTR1FP30939 366 aa12.85□□□□□ -0.35
PTPN7-216ENST00000492977 SLC6A6P31641 620 aa12.85□□□□□ -0.35
PTPN7-216ENST00000492977 FOXK2Q01167 660 aa12.85□□□□□ -0.35
PTPN7-216ENST00000492977 C1DQ13901 141 aaKnown RBP12.85□□□□□ -0.35
PTPN7-216ENST00000492977 ELOA3BQ3SY89 546 aa12.85□□□□□ -0.35
PTPN7-216ENST00000492977 MRPL14Q6P1L8 145 aaKnown RBP12.85□□□□□ -0.35
PTPN7-216ENST00000492977 PAPD4Q6PIY7 484 aaKnown RBP12.85□□□□□ -0.35
PTPN7-216ENST00000492977 C19orf48Q6RUI8 117 aa12.85□□□□□ -0.35
PTPN7-216ENST00000492977 CBLN3Q6UW01 205 aa12.85□□□□□ -0.35
PTPN7-216ENST00000492977 TMEM205Q6UW68 189 aa12.85□□□□□ -0.35
PTPN7-216ENST00000492977 THSD4Q6ZMP0 1018 aa12.85□□□□□ -0.35
PTPN7-216ENST00000492977 CXXC5Q7LFL8 322 aaKnown RBP12.85□□□□□ -0.35
PTPN7-216ENST00000492977 CPEB2Q7Z5Q1 589 aaKnown RBP12.85□□□□□ -0.35
PTPN7-216ENST00000492977 ATG4DQ86TL0 474 aaPredicted RBP12.85□□□□□ -0.35
PTPN7-216ENST00000492977 CPOQ8IVL8 374 aa12.85□□□□□ -0.35
PTPN7-216ENST00000492977 TMCO5AQ8N6Q1 288 aa12.85□□□□□ -0.35
PTPN7-216ENST00000492977 ELOA3Q8NG57 546 aa12.85□□□□□ -0.35
PTPN7-216ENST00000492977 OR8K3Q8NH51 312 aa12.85□□□□□ -0.35
PTPN7-216ENST00000492977 OR51A7Q8NH64 312 aa12.85□□□□□ -0.35
PTPN7-216ENST00000492977 VMP1Q96GC9 406 aa12.85□□□□□ -0.35
PTPN7-216ENST00000492977 TNFRSF13CQ96RJ3 184 aa12.85□□□□□ -0.35
PTPN7-216ENST00000492977 LPAR4Q99677 370 aa12.85□□□□□ -0.35
PTPN7-216ENST00000492977 CTRCQ99895 268 aa12.85□□□□□ -0.35
PTPN7-216ENST00000492977 TMEM43Q9BTV4 400 aa12.85□□□□□ -0.35
PTPN7-216ENST00000492977 CRB3Q9BUF7 120 aa12.85□□□□□ -0.35
PTPN7-216ENST00000492977 TBL1XR1Q9BZK7 514 aa12.85□□□□□ -0.35
PTPN7-216ENST00000492977 MCCC2Q9HCC0 563 aa12.85□□□□□ -0.35
PTPN7-216ENST00000492977 CLEC2DQ9UHP7 191 aa12.85□□□□□ -0.35
PTPN7-216ENST00000492977 EXOSC1Q9Y3B2 195 aaKnown RBP12.85□□□□□ -0.35
PTPN7-216ENST00000492977 CCRL2O00421 344 aa12.84□□□□□ -0.35
PTPN7-216ENST00000492977 GNB5O14775 395 aa12.84□□□□□ -0.35
PTPN7-216ENST00000492977 MYL12BO14950 172 aa12.84□□□□□ -0.35
PTPN7-216ENST00000492977 CSO75390 466 aaKnown RBP12.84□□□□□ -0.35
PTPN7-216ENST00000492977 CLPXO76031 633 aa12.84□□□□□ -0.35
PTPN7-216ENST00000492977 SLC2A10O95528 541 aa12.84□□□□□ -0.35
PTPN7-216ENST00000492977 KLK3P07288 261 aaPredicted RBP12.84□□□□□ -0.35
PTPN7-216ENST00000492977 PEPDP12955 493 aa12.84□□□□□ -0.35
PTPN7-216ENST00000492977 GADD45AP24522 165 aa12.84□□□□□ -0.35
PTPN7-216ENST00000492977 UGT2B10P36537 528 aa12.84□□□□□ -0.35
PTPN7-216ENST00000492977 SLC1A3P43003 542 aa12.84□□□□□ -0.35
PTPN7-216ENST00000492977 CLK1P49759 484 aaKnown RBP12.84□□□□□ -0.35
PTPN7-216ENST00000492977 CCR4P51679 360 aa12.84□□□□□ -0.35
PTPN7-216ENST00000492977 FOXL2P58012 376 aa12.84□□□□□ -0.35
PTPN7-216ENST00000492977 VBP1P61758 197 aa12.84□□□□□ -0.35
PTPN7-216ENST00000492977 LSM3P62310 102 aaKnown RBP12.84□□□□□ -0.35
PTPN7-216ENST00000492977 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.84□□□□□ -0.35
PTPN7-216ENST00000492977 FHL1Q13642 323 aa12.84□□□□□ -0.35
PTPN7-216ENST00000492977 EFR3AQ14156 821 aa12.84□□□□□ -0.35
PTPN7-216ENST00000492977 TIMM50Q3ZCQ8 353 aa12.84□□□□□ -0.35
PTPN7-216ENST00000492977 LCN10Q6JVE6 187 aa12.84□□□□□ -0.35
PTPN7-216ENST00000492977 NUP54Q7Z3B4 507 aa12.84□□□□□ -0.35
PTPN7-216ENST00000492977 OR5L2Q8NGL0 311 aa12.84□□□□□ -0.35
PTPN7-216ENST00000492977 TBC1D15Q8TC07 691 aa12.84□□□□□ -0.35
PTPN7-216ENST00000492977 RHBDD1Q8TEB9 315 aa12.84□□□□□ -0.35
PTPN7-216ENST00000492977 ATOH1Q92858 354 aaPredicted RBP12.84□□□□□ -0.35
PTPN7-216ENST00000492977 WDR77Q9BQA1 342 aaPredicted RBP12.84□□□□□ -0.35
PTPN7-216ENST00000492977 ADAM19Q9H013 955 aa12.84□□□□□ -0.35
PTPN7-216ENST00000492977 HINT3Q9NQE9 182 aaKnown RBP12.84□□□□□ -0.35
PTPN7-216ENST00000492977 EXOGQ9Y2C4 368 aaKnown RBP12.84□□□□□ -0.35
PTPN7-216ENST00000492977 ZNF337Q9Y3M9 751 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms