RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 TPST2O60704 377 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 FCN3O75636 299 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 SULT1C4O75897 302 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 OR2J2O76002 312 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 TOX4O94842 621 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 AP2A2O94973 939 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 SYNGR4O95473 234 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 PRNPP04156 253 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 OR8U9P0C7N5 309 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 DANCRP0C864 163 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 VPREB1P12018 145 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 BMP3P12645 472 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 CALML3P27482 149 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 SLC6A8P48029 635 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 RBP2P50120 134 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 PPOXP50336 477 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 TNFSF10P50591 281 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 GPR143P51810 404 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 ZNF75DP51815 510 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 ATP1B3P54709 279 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 JAG1P78504 1218 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 CDK5R2Q13319 367 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 NFATC2Q13469 925 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 PSG5Q15238 335 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 PRTGQ2VWP7 1150 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 RFX4Q33E94 735 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 TMEM176BQ3YBM2 270 aaPredicted RBP3.85□□□□□ -1.79
BRCA1-220ENST00000492859 GGTA1PQ4G0N0 100 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 C14orf28Q4W4Y0 310 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 ACSBG2Q5FVE4 666 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 ZNF648Q5T619 568 aaPredicted RBP3.85□□□□□ -1.79
BRCA1-220ENST00000492859 AGAP6Q5VW22 663 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 HIST2H2BCQ6DN03 193 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 HIST2H2BDQ6DRA6 164 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 LCLAT1Q6UWP7 414 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 C16orf89Q6UX73 402 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 HACD2Q6Y1H2 254 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 TMEM179Q6ZVK1 233 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 CENPUQ71F23 418 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 H2BFWTQ7Z2G1 175 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 CTU1Q7Z7A3 348 aaKnown RBP3.85□□□□□ -1.79
BRCA1-220ENST00000492859 MEX3DQ86XN8 651 aaKnown RBP3.85□□□□□ -1.79
BRCA1-220ENST00000492859 XYLT1Q86Y38 959 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 ZDHHC13Q8IUH4 622 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 PLXDC1Q8IUK5 500 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 VPS8Q8N3P4 1428 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 AMER2Q8N7J2 671 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 WDSUB1Q8N9V3 476 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 MDGA1Q8NFP4 955 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 OR2M7Q8NG81 312 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 OR2AK2Q8NG84 335 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 OR10Q1Q8NGQ4 319 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 OR5H6Q8NGV6 325 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 OR6K3Q8NGY3 331 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 FAM110BQ8TC76 370 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 CD200R1Q8TD46 325 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 RNASEH2CQ8TDP1 164 aaKnown RBP3.85□□□□□ -1.79
BRCA1-220ENST00000492859 ADAMTS14Q8WXS8 1223 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 C11orf40Q8WZ69 217 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 TFGQ92734 400 aaPredicted RBP3.85□□□□□ -1.79
BRCA1-220ENST00000492859 FAF2Q96CS3 445 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 MSI2Q96DH6 328 aaKnown RBP3.85□□□□□ -1.79
BRCA1-220ENST00000492859 YIPF6Q96EC8 236 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 TRMT61AQ96FX7 289 aaKnown RBP3.85□□□□□ -1.79
BRCA1-220ENST00000492859 SFRP2Q96HF1 295 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 MS4A14Q96JA4 679 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 ZBTB45Q96K62 511 aaPredicted RBP3.85□□□□□ -1.79
BRCA1-220ENST00000492859 HIST1H2AHQ96KK5 128 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 RPL10LQ96L21 214 aaKnown RBP3.85□□□□□ -1.79
BRCA1-220ENST00000492859 PRMT6Q96LA8 375 aaPredicted RBP3.85□□□□□ -1.79
BRCA1-220ENST00000492859 NOL4LQ96MY1 436 aaPredicted RBP3.85□□□□□ -1.79
BRCA1-220ENST00000492859 AMDHD1Q96NU7 426 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 ALKBH3Q96Q83 286 aaPredicted RBP3.85□□□□□ -1.79
BRCA1-220ENST00000492859 HIST1H2AAQ96QV6 131 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 HBEGFQ99075 208 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 SLC38A3Q99624 504 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 HIST1H2AJQ99878 128 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 TTYH2Q9BSA4 534 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 FUCA2Q9BTY2 467 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 G6PC3Q9BUM1 346 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 ELOVL1Q9BW60 279 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 BARHL1Q9BZE3 327 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 FOXQ1Q9C009 403 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 C11orf54Q9H0W9 315 aaPredicted RBP3.85□□□□□ -1.79
BRCA1-220ENST00000492859 TLNRD1Q9H1K6 362 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 ESRP2Q9H6T0 727 aaKnown RBP3.85□□□□□ -1.79
BRCA1-220ENST00000492859 EGLN3Q9H6Z9 239 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 GAREM1Q9H706 876 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 NMNAT1Q9HAN9 279 aaPredicted RBP3.85□□□□□ -1.79
BRCA1-220ENST00000492859 NIT2Q9NQR4 276 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 PDS5BQ9NTI5 1447 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 GHRLQ9UBU3 117 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 DNAJC12Q9UKB3 198 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 POU2F3Q9UKI9 436 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 ELF5Q9UKW6 265 aaPredicted RBP3.85□□□□□ -1.79
BRCA1-220ENST00000492859 CLIC4Q9Y696 253 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 STYXL1Q9Y6J8 313 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 FLT4P35916 1363 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 ANKRD36BQ8N2N9 1353 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 PLEKHH1Q9ULM0 1364 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms