RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 CARD18P57730 90 aa9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 RAC3P60763 192 aa9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 CDK6Q00534 326 aa9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 SORDQ00796 357 aa9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 RBBP4Q09028 425 aa9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 SCARB2Q14108 478 aa9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 GUSBP1Q15486 140 aa9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 TRMT5Q32P41 509 aaKnown RBP9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 TMEM176BQ3YBM2 270 aaPredicted RBP9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 SYT14P1Q58G82 188 aa9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 ZNF311Q5JNZ3 666 aa9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 GTF2IRD2BQ6EKJ0 949 aa9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 PPP4R4Q6NUP7 873 aa9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 FAM214BQ7L5A3 538 aa9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 GTF2IRD2Q86UP8 949 aa9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 KRT73Q86Y46 540 aa9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 KIF18BQ86Y91 864 aa9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 SLC30A8Q8IWU4 369 aa9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 C10orf111Q8N326 155 aa9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 CNEP1R1Q8N9A8 125 aa9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 NFKBIDQ8NI38 313 aa9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 RNF128Q8TEB7 428 aa9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 OSTF1Q92882 214 aa9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 ZNF524Q96C55 264 aa9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 C14orf79Q96F83 325 aa9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 REXO5Q96IC2 774 aaKnown RBP9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 CCDC106Q9BWC9 280 aa9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 TRIM8Q9BZR9 551 aa9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 NSRP1Q9H0G5 558 aaKnown RBP9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 IKZF5Q9H5V7 419 aa9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 COQ10BQ9H8M1 238 aa9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 KCNN3Q9UGI6 736 aa9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 CHRNA9Q9UGM1 479 aa9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 ANGPT4Q9Y264 503 aa9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 EMC9Q9Y3B6 208 aa9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 CAPN7Q9Y6W3 813 aa9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 INTS1Q8N201 2190 aaKnown RBP9.55□□□□□ -0.88
CDC42SE1-206ENST00000492796 PRORSD1PA6NEY8 169 aa9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 FBP2O00757 339 aa9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 AP3D1O14617 1153 aa9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 MSTNO14793 375 aa9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 CCDC22O60826 627 aa9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 ADAM11O75078 769 aa9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 SS18L1O75177 396 aaPredicted RBP9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 PLGP00747 810 aaPredicted RBP9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 CD8BP10966 210 aa9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 SSTR2P30874 369 aa9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 SLC1A3P43003 542 aa9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 KIR2DL2P43627 348 aaPredicted RBP9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 CPA2P48052 419 aa9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 PCYT1AP49585 367 aa9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 CLK1P49759 484 aaKnown RBP9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 POLR2HP52434 150 aaKnown RBP9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 MTPNP58546 118 aa9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 COPZ1P61923 177 aa9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 CSNK2A1P68400 391 aaPredicted RBP9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 SF3A3Q12874 501 aaKnown RBP eCLIP9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 CYLC2Q14093 348 aaPredicted RBP9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 RNPS1Q15287 305 aaKnown RBP9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 CYP51A1Q16850 503 aa9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 MMEL1Q495T6 779 aa9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 REP15Q6BDI9 236 aa9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 VWA1Q6PCB0 445 aa9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 SERPINA11Q86U17 422 aa9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 PCYOX1LQ8NBM8 494 aa9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 C11orf65Q8NCR3 313 aa9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 HIPK4Q8NE63 616 aa9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 ATP6V1C2Q8NEY4 427 aa9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 BHLHE22Q8NFJ8 381 aaPredicted RBP9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 OR6K3Q8NGY3 331 aa9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 STARD4Q96DR4 205 aa9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 OR5B2Q96R09 309 aa9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 ZNF607Q96SK3 696 aa9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 SH3GL1Q99961 368 aa9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 RBM24Q9BX46 236 aaKnown RBP9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 SRXN1Q9BYN0 137 aa9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 KAT8Q9H7Z6 458 aaKnown RBP9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 EVA1AQ9H8M9 152 aa9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 GP6Q9HCN6 339 aa9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 CTPS2Q9NRF8 586 aa9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 RLIMQ9NVW2 624 aa9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 HDGFL3Q9Y3E1 203 aa9.54□□□□□ -0.88
CDC42SE1-206ENST00000492796 A8MXE2 369 aa9.53□□□□□ -0.88
CDC42SE1-206ENST00000492796 MRASO14807 208 aa9.53□□□□□ -0.88
CDC42SE1-206ENST00000492796 ZNF208O43345 1280 aa9.53□□□□□ -0.88
CDC42SE1-206ENST00000492796 DNPH1O43598 174 aa9.53□□□□□ -0.88
CDC42SE1-206ENST00000492796 SERPINB7O75635 380 aa9.53□□□□□ -0.88
CDC42SE1-206ENST00000492796 SMNDC1O75940 238 aaKnown RBP eCLIP9.53□□□□□ -0.88
CDC42SE1-206ENST00000492796 GKN3PP0CG01 181 aa9.53□□□□□ -0.88
CDC42SE1-206ENST00000492796 TACR3P29371 465 aa9.53□□□□□ -0.88
CDC42SE1-206ENST00000492796 LSP1P33241 339 aa9.53□□□□□ -0.88
CDC42SE1-206ENST00000492796 ACAA2P42765 397 aaKnown RBP9.53□□□□□ -0.88
CDC42SE1-206ENST00000492796 CTBP2P56545 445 aa9.53□□□□□ -0.88
CDC42SE1-206ENST00000492796 SIRPAP78324 504 aa9.53□□□□□ -0.88
CDC42SE1-206ENST00000492796 SELPLGQ14242 412 aa9.53□□□□□ -0.88
CDC42SE1-206ENST00000492796 ADRM1Q16186 407 aa9.53□□□□□ -0.88
CDC42SE1-206ENST00000492796 WBP2NLQ6ICG8 309 aa9.53□□□□□ -0.88
CDC42SE1-206ENST00000492796 DHRS4L2Q6PKH6 230 aa9.53□□□□□ -0.88
CDC42SE1-206ENST00000492796 TMPPEQ6ZT21 453 aa9.53□□□□□ -0.88
CDC42SE1-206ENST00000492796 FCRLAQ7L513 359 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms