RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 ADAM19Q9H013 955 aa19.72■□□□□ 0.75
VCPKMT-204ENST00000491402 UBQLN3Q9H347 655 aa19.72■□□□□ 0.75
VCPKMT-204ENST00000491402 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.72■□□□□ 0.75
VCPKMT-204ENST00000491402 SAC3D1A6NKF1 404 aa19.72■□□□□ 0.75
VCPKMT-204ENST00000491402 ETV2O00321 342 aaPredicted RBP19.72■□□□□ 0.75
VCPKMT-204ENST00000491402 WISP1O95388 367 aa19.72■□□□□ 0.75
VCPKMT-204ENST00000491402 FPR1P21462 350 aa19.72■□□□□ 0.75
VCPKMT-204ENST00000491402 DPP4P27487 766 aa19.72■□□□□ 0.75
VCPKMT-204ENST00000491402 TACR3P29371 465 aa19.72■□□□□ 0.75
VCPKMT-204ENST00000491402 GK3PQ14409 553 aa19.72■□□□□ 0.75
VCPKMT-204ENST00000491402 LAPTM4AQ15012 233 aa19.72■□□□□ 0.75
VCPKMT-204ENST00000491402 DCST1Q5T197 706 aa19.72■□□□□ 0.75
VCPKMT-204ENST00000491402 SHQ1Q6PI26 577 aaKnown RBP19.72■□□□□ 0.75
VCPKMT-204ENST00000491402 LSRQ86X29 649 aaPredicted RBP19.72■□□□□ 0.75
VCPKMT-204ENST00000491402 ZFP62Q8NB50 900 aaPredicted RBP19.72■□□□□ 0.75
VCPKMT-204ENST00000491402 WBP1Q96G27 269 aa19.72■□□□□ 0.75
VCPKMT-204ENST00000491402 NPAS1Q99742 590 aa19.72■□□□□ 0.75
VCPKMT-204ENST00000491402 MFRPQ9BY79 579 aa19.72■□□□□ 0.75
VCPKMT-204ENST00000491402 TTTY12Q9BZ98 90 aa19.72■□□□□ 0.75
VCPKMT-204ENST00000491402 SLC25A18Q9H1K4 315 aa19.72■□□□□ 0.75
VCPKMT-204ENST00000491402 PRRC2CQ9Y520 2896 aaKnown RBP19.72■□□□□ 0.75
VCPKMT-204ENST00000491402 SPTA1P02549 2419 aa19.71■□□□□ 0.75
VCPKMT-204ENST00000491402 FAM47E-STBD1D6RA91 191 aa19.71■□□□□ 0.75
VCPKMT-204ENST00000491402 CASQ2O14958 399 aaPredicted RBP19.71■□□□□ 0.75
VCPKMT-204ENST00000491402 NTN1O95631 604 aa19.71■□□□□ 0.75
VCPKMT-204ENST00000491402 RFC3P40938 356 aa19.71■□□□□ 0.75
VCPKMT-204ENST00000491402 DLX5P56178 289 aa19.71■□□□□ 0.75
VCPKMT-204ENST00000491402 FOXF1Q12946 379 aa19.71■□□□□ 0.75
VCPKMT-204ENST00000491402 ZNF169Q14929 603 aaPredicted RBP19.71■□□□□ 0.75
VCPKMT-204ENST00000491402 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.71■□□□□ 0.75
VCPKMT-204ENST00000491402 ATG4DQ86TL0 474 aaPredicted RBP19.71■□□□□ 0.75
VCPKMT-204ENST00000491402 HS3ST5Q8IZT8 346 aa19.71■□□□□ 0.75
VCPKMT-204ENST00000491402 RBMXL3Q8N7X1 1067 aaKnown RBP19.71■□□□□ 0.75
VCPKMT-204ENST00000491402 OR5K1Q8NHB7 308 aa19.71■□□□□ 0.75
VCPKMT-204ENST00000491402 TMEM255BQ8WV15 326 aa19.71■□□□□ 0.75
VCPKMT-204ENST00000491402 MPP4Q96JB8 637 aa19.71■□□□□ 0.75
VCPKMT-204ENST00000491402 BARD1Q99728 777 aaKnown RBP19.71■□□□□ 0.75
VCPKMT-204ENST00000491402 CIB1Q99828 191 aa19.71■□□□□ 0.75
VCPKMT-204ENST00000491402 ZNF703Q9H7S9 590 aaPredicted RBP19.71■□□□□ 0.75
VCPKMT-204ENST00000491402 STOML1Q9UBI4 398 aa19.71■□□□□ 0.75
VCPKMT-204ENST00000491402 DKKL1Q9UK85 242 aa19.71■□□□□ 0.75
VCPKMT-204ENST00000491402 MAGED1Q9Y5V3 778 aaPredicted RBP19.71■□□□□ 0.75
VCPKMT-204ENST00000491402 CHD6Q8TD26 2715 aa19.71■□□□□ 0.75
VCPKMT-204ENST00000491402 BSNQ9UPA5 3926 aa19.71■□□□□ 0.75
VCPKMT-204ENST00000491402 A0A087WZY1 265 aa19.7■□□□□ 0.74
VCPKMT-204ENST00000491402 G3V2T6 193 aa19.7■□□□□ 0.74
VCPKMT-204ENST00000491402 SFTPCP11686 197 aa19.7■□□□□ 0.74
VCPKMT-204ENST00000491402 PEX2P28328 305 aa19.7■□□□□ 0.74
VCPKMT-204ENST00000491402 ARHGDIAP52565 204 aa19.7■□□□□ 0.74
VCPKMT-204ENST00000491402 SEC23BQ15437 767 aa19.7■□□□□ 0.74
VCPKMT-204ENST00000491402 SLC25A53Q5H9E4 307 aa19.7■□□□□ 0.74
VCPKMT-204ENST00000491402 PODNL1Q6PEZ8 512 aa19.7■□□□□ 0.74
VCPKMT-204ENST00000491402 Q6ZS92 163 aa19.7■□□□□ 0.74
VCPKMT-204ENST00000491402 ZDHHC13Q8IUH4 622 aa19.7■□□□□ 0.74
VCPKMT-204ENST00000491402 SVOPLQ8N434 492 aa19.7■□□□□ 0.74
VCPKMT-204ENST00000491402 EME1Q96AY2 570 aa19.7■□□□□ 0.74
VCPKMT-204ENST00000491402 ZBTB8AQ96BR9 441 aa19.7■□□□□ 0.74
VCPKMT-204ENST00000491402 MRGPRX4Q96LA9 322 aa19.7■□□□□ 0.74
VCPKMT-204ENST00000491402 UBL7Q96S82 380 aaPredicted RBP19.7■□□□□ 0.74
VCPKMT-204ENST00000491402 ZNF426Q9BUY5 554 aa19.7■□□□□ 0.74
VCPKMT-204ENST00000491402 C12orf10Q9HB07 376 aa19.7■□□□□ 0.74
VCPKMT-204ENST00000491402 B4GALT7Q9UBV7 327 aa19.7■□□□□ 0.74
VCPKMT-204ENST00000491402 OSGIN1Q9UJX0 560 aa19.7■□□□□ 0.74
VCPKMT-204ENST00000491402 TMCC3Q9ULS5 477 aa19.7■□□□□ 0.74
VCPKMT-204ENST00000491402 A0A087WUJ7 227 aa19.7■□□□□ 0.74
VCPKMT-204ENST00000491402 GLSO94925 669 aaPredicted RBP19.7■□□□□ 0.74
VCPKMT-204ENST00000491402 PNMTP11086 282 aa19.7■□□□□ 0.74
VCPKMT-204ENST00000491402 TCEA1P23193 301 aaKnown RBP19.7■□□□□ 0.74
VCPKMT-204ENST00000491402 GDF1P27539 372 aa19.7■□□□□ 0.74
VCPKMT-204ENST00000491402 SRD5A2P31213 254 aa19.7■□□□□ 0.74
VCPKMT-204ENST00000491402 HTR3AP46098 478 aa19.7■□□□□ 0.74
VCPKMT-204ENST00000491402 POLR2HP52434 150 aaKnown RBP19.7■□□□□ 0.74
VCPKMT-204ENST00000491402 MERTKQ12866 999 aa19.7■□□□□ 0.74
VCPKMT-204ENST00000491402 TOMM20Q15388 145 aa19.7■□□□□ 0.74
VCPKMT-204ENST00000491402 LRRC36Q1X8D7 754 aa19.7■□□□□ 0.74
VCPKMT-204ENST00000491402 LPCAT4Q643R3 524 aa19.7■□□□□ 0.74
VCPKMT-204ENST00000491402 LINC00114Q6XXX2 140 aa19.7■□□□□ 0.74
VCPKMT-204ENST00000491402 ACOT11Q8WXI4 607 aaPredicted RBP19.7■□□□□ 0.74
VCPKMT-204ENST00000491402 NRBF2Q96F24 287 aa19.7■□□□□ 0.74
VCPKMT-204ENST00000491402 A0A087WUU8 490 aa19.69■□□□□ 0.74
VCPKMT-204ENST00000491402 SH3PXD2BA1X283 911 aa19.69■□□□□ 0.74
VCPKMT-204ENST00000491402 ELOA3DA6NLF2 546 aaPredicted RBP19.69■□□□□ 0.74
VCPKMT-204ENST00000491402 PDLIM1O00151 329 aa19.69■□□□□ 0.74
VCPKMT-204ENST00000491402 ZIC3O60481 467 aa19.69■□□□□ 0.74
VCPKMT-204ENST00000491402 PTNP21246 168 aa19.69■□□□□ 0.74
VCPKMT-204ENST00000491402 LSM11P83369 360 aaKnown RBP eCLIP19.69■□□□□ 0.74
VCPKMT-204ENST00000491402 PLGLB1Q02325 96 aa19.69■□□□□ 0.74
VCPKMT-204ENST00000491402 MICAQ29983 383 aa19.69■□□□□ 0.74
VCPKMT-204ENST00000491402 HYAL4Q2M3T9 481 aa19.69■□□□□ 0.74
VCPKMT-204ENST00000491402 ELOA3BQ3SY89 546 aa19.69■□□□□ 0.74
VCPKMT-204ENST00000491402 POMZP3Q6PJE2 187 aa19.69■□□□□ 0.74
VCPKMT-204ENST00000491402 HIPK1Q86Z02 1210 aa19.69■□□□□ 0.74
VCPKMT-204ENST00000491402 FAM98AQ8NCA5 519 aaKnown RBP19.69■□□□□ 0.74
VCPKMT-204ENST00000491402 ELOA3Q8NG57 546 aa19.69■□□□□ 0.74
VCPKMT-204ENST00000491402 POC1BQ8TC44 478 aa19.69■□□□□ 0.74
VCPKMT-204ENST00000491402 NRG4Q8WWG1 115 aa19.69■□□□□ 0.74
VCPKMT-204ENST00000491402 DTNBP1Q96EV8 351 aa19.69■□□□□ 0.74
VCPKMT-204ENST00000491402 PDP1Q9P0J1 537 aaPredicted RBP19.69■□□□□ 0.74
VCPKMT-204ENST00000491402 RPH3AQ9Y2J0 694 aaPredicted RBP19.69■□□□□ 0.74
VCPKMT-204ENST00000491402 SPENQ96T58 3664 aaKnown RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms