RNA–Protein interactions for RNA: ENST00000490667.1

SHC1-211, Transcript of SHC adaptor protein 1, humanhuman

TSL 2

Gene SHC1, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-211ENST00000490667 RPS4Y1P22090 263 aaKnown RBP11.74□□□□□ -0.53
SHC1-211ENST00000490667 FKBP2P26885 142 aaKnown RBP11.74□□□□□ -0.53
SHC1-211ENST00000490667 AGTR1P30556 359 aa11.74□□□□□ -0.53
SHC1-211ENST00000490667 ATP4BP51164 291 aa11.74□□□□□ -0.53
SHC1-211ENST00000490667 CRISP3P54108 245 aa11.74□□□□□ -0.53
SHC1-211ENST00000490667 SQLEQ14534 574 aa11.74□□□□□ -0.53
SHC1-211ENST00000490667 PAGE3Q5JUK9 113 aa11.74□□□□□ -0.53
SHC1-211ENST00000490667 MRPL2Q5T653 305 aaKnown RBP11.74□□□□□ -0.53
SHC1-211ENST00000490667 GRINAQ7Z429 371 aa11.74□□□□□ -0.53
SHC1-211ENST00000490667 VRK2Q86Y07 508 aa11.74□□□□□ -0.53
SHC1-211ENST00000490667 ADGRG3Q86Y34 549 aa11.74□□□□□ -0.53
SHC1-211ENST00000490667 TUSC5Q8IXB3 177 aa11.74□□□□□ -0.53
SHC1-211ENST00000490667 ABHD3Q8WU67 409 aa11.74□□□□□ -0.53
SHC1-211ENST00000490667 SLC25A43Q8WUT9 341 aaPredicted RBP11.74□□□□□ -0.53
SHC1-211ENST00000490667 MED18Q9BUE0 208 aa11.74□□□□□ -0.53
SHC1-211ENST00000490667 C12orf49Q9H741 205 aa11.74□□□□□ -0.53
SHC1-211ENST00000490667 GP6Q9HCN6 339 aa11.74□□□□□ -0.53
SHC1-211ENST00000490667 FANCFQ9NPI8 374 aa11.74□□□□□ -0.53
SHC1-211ENST00000490667 SLC52A3Q9NQ40 469 aa11.74□□□□□ -0.53
SHC1-211ENST00000490667 KLHL28Q9NXS3 571 aa11.74□□□□□ -0.53
SHC1-211ENST00000490667 SLAMF8Q9P0V8 285 aa11.74□□□□□ -0.53
SHC1-211ENST00000490667 CHRNA9Q9UGM1 479 aa11.74□□□□□ -0.53
SHC1-211ENST00000490667 EDARQ9UNE0 448 aa11.74□□□□□ -0.53
SHC1-211ENST00000490667 ZNF232Q9UNY5 417 aa11.74□□□□□ -0.53
SHC1-211ENST00000490667 TESMINQ9Y4I5 508 aa11.74□□□□□ -0.53
SHC1-211ENST00000490667 SPIN1Q9Y657 262 aaPredicted RBP11.74□□□□□ -0.53
SHC1-211ENST00000490667 INTS1Q8N201 2190 aaKnown RBP11.74□□□□□ -0.53
SHC1-211ENST00000490667 CFAP73A6NFT4 308 aa11.73□□□□□ -0.53
SHC1-211ENST00000490667 MYO9AB2RTY4 2548 aa11.73□□□□□ -0.53
SHC1-211ENST00000490667 SULT2B1O00204 365 aa11.73□□□□□ -0.53
SHC1-211ENST00000490667 EDF1O60869 148 aaKnown RBP11.73□□□□□ -0.53
SHC1-211ENST00000490667 HRGP04196 525 aa11.73□□□□□ -0.53
SHC1-211ENST00000490667 NUDT7P0C024 238 aa11.73□□□□□ -0.53
SHC1-211ENST00000490667 HOXB9P17482 250 aaPredicted RBP11.73□□□□□ -0.53
SHC1-211ENST00000490667 NCF2P19878 526 aaPredicted RBP11.73□□□□□ -0.53
SHC1-211ENST00000490667 CCNA2P20248 432 aa11.73□□□□□ -0.53
SHC1-211ENST00000490667 HTR3AP46098 478 aa11.73□□□□□ -0.53
SHC1-211ENST00000490667 CLK1P49759 484 aaKnown RBP11.73□□□□□ -0.53
SHC1-211ENST00000490667 DIO1P49895 249 aa11.73□□□□□ -0.53
SHC1-211ENST00000490667 CSNK2A1P68400 391 aaPredicted RBP11.73□□□□□ -0.53
SHC1-211ENST00000490667 POU4F3Q15319 338 aa11.73□□□□□ -0.53
SHC1-211ENST00000490667 SYT14P1Q58G82 188 aa11.73□□□□□ -0.53
SHC1-211ENST00000490667 LRIF1Q5T3J3 769 aa11.73□□□□□ -0.53
SHC1-211ENST00000490667 ANKRD34AQ69YU3 496 aa11.73□□□□□ -0.53
SHC1-211ENST00000490667 BEND4Q6ZU67 534 aa11.73□□□□□ -0.53
SHC1-211ENST00000490667 ZNF550Q7Z398 422 aa11.73□□□□□ -0.53
SHC1-211ENST00000490667 NUFIP2Q7Z417 695 aaKnown RBP11.73□□□□□ -0.53
SHC1-211ENST00000490667 STK32CQ86UX6 486 aa11.73□□□□□ -0.53
SHC1-211ENST00000490667 ZNF440Q8IYI8 595 aa11.73□□□□□ -0.53
SHC1-211ENST00000490667 STON2Q8WXE9 905 aa11.73□□□□□ -0.53
SHC1-211ENST00000490667 TMEM19Q96HH6 336 aa11.73□□□□□ -0.53
SHC1-211ENST00000490667 RABEP2Q9H5N1 569 aa11.73□□□□□ -0.53
SHC1-211ENST00000490667 RLIMQ9NVW2 624 aa11.73□□□□□ -0.53
SHC1-211ENST00000490667 ZNF226Q9NYT6 803 aa11.73□□□□□ -0.53
SHC1-211ENST00000490667 SLC25A37Q9NYZ2 338 aa11.73□□□□□ -0.53
SHC1-211ENST00000490667 KLHL13Q9P2N7 655 aa11.73□□□□□ -0.53
SHC1-211ENST00000490667 ST6GALNAC2Q9UJ37 374 aa11.73□□□□□ -0.53
SHC1-211ENST00000490667 DCTN4Q9UJW0 460 aa11.73□□□□□ -0.53
SHC1-211ENST00000490667 PCNX3Q9H6A9 2034 aa11.72□□□□□ -0.53
SHC1-211ENST00000490667 DSPPQ9NZW4 1301 aa11.72□□□□□ -0.53
SHC1-211ENST00000490667 TMED7-TICAM2A0A0A6YYA0 188 aa11.72□□□□□ -0.53
SHC1-211ENST00000490667 CDHR4A6H8M9 788 aa11.72□□□□□ -0.53
SHC1-211ENST00000490667 FAAHO00519 579 aa11.72□□□□□ -0.53
SHC1-211ENST00000490667 SMAD9O15198 467 aaKnown RBP11.72□□□□□ -0.53
SHC1-211ENST00000490667 CYTIPO60759 359 aa11.72□□□□□ -0.53
SHC1-211ENST00000490667 BMP2P12643 396 aa11.72□□□□□ -0.53
SHC1-211ENST00000490667 UQCRBP14927 111 aa11.72□□□□□ -0.53
SHC1-211ENST00000490667 CD1EP15812 388 aa11.72□□□□□ -0.53
SHC1-211ENST00000490667 CCKARP32238 428 aa11.72□□□□□ -0.53
SHC1-211ENST00000490667 SLC1A3P43003 542 aa11.72□□□□□ -0.53
SHC1-211ENST00000490667 POLR2HP52434 150 aaKnown RBP11.72□□□□□ -0.53
SHC1-211ENST00000490667 IST1P53990 364 aa11.72□□□□□ -0.53
SHC1-211ENST00000490667 RASGEF1BQ0VAM2 473 aa11.72□□□□□ -0.53
SHC1-211ENST00000490667 EPS8Q12929 822 aa11.72□□□□□ -0.53
SHC1-211ENST00000490667 FADDQ13158 208 aa11.72□□□□□ -0.53
SHC1-211ENST00000490667 LARS2Q15031 903 aaKnown RBP11.72□□□□□ -0.53
SHC1-211ENST00000490667 TESK1Q15569 626 aa11.72□□□□□ -0.53
SHC1-211ENST00000490667 ZSWIM7Q19AV6 140 aa11.72□□□□□ -0.53
SHC1-211ENST00000490667 LIN52Q52LA3 116 aa11.72□□□□□ -0.53
SHC1-211ENST00000490667 RPS26P11Q5JNZ5 115 aaPredicted RBP11.72□□□□□ -0.53
SHC1-211ENST00000490667 STAC2Q6ZMT1 411 aa11.72□□□□□ -0.53
SHC1-211ENST00000490667 ZNF836Q6ZNA1 936 aa11.72□□□□□ -0.53
SHC1-211ENST00000490667 C22orf34Q6ZV56 151 aa11.72□□□□□ -0.53
SHC1-211ENST00000490667 MTDHQ86UE4 582 aaKnown RBP11.72□□□□□ -0.53
SHC1-211ENST00000490667 MSRB3Q8IXL7 192 aa11.72□□□□□ -0.53
SHC1-211ENST00000490667 NINJ1Q92982 152 aa11.72□□□□□ -0.53
SHC1-211ENST00000490667 MAL2Q969L2 176 aa11.72□□□□□ -0.53
SHC1-211ENST00000490667 ZNF775Q96BV0 537 aaPredicted RBP11.72□□□□□ -0.53
SHC1-211ENST00000490667 ARL5BQ96KC2 179 aa11.72□□□□□ -0.53
SHC1-211ENST00000490667 TACO1Q9BSH4 297 aaKnown RBP11.72□□□□□ -0.53
SHC1-211ENST00000490667 PLEKHF2Q9H8W4 249 aa11.72□□□□□ -0.53
SHC1-211ENST00000490667 CACYBPQ9HB71 228 aaKnown RBP11.72□□□□□ -0.53
SHC1-211ENST00000490667 NPHS2Q9NP85 383 aa11.72□□□□□ -0.53
SHC1-211ENST00000490667 A4GALTQ9NPC4 353 aa11.72□□□□□ -0.53
SHC1-211ENST00000490667 KLHL9Q9P2J3 617 aa11.72□□□□□ -0.53
SHC1-211ENST00000490667 OSGIN1Q9UJX0 560 aa11.72□□□□□ -0.53
SHC1-211ENST00000490667 ING1Q9UK53 422 aaPredicted RBP11.72□□□□□ -0.53
SHC1-211ENST00000490667 PRDM4Q9UKN5 801 aa11.72□□□□□ -0.53
SHC1-211ENST00000490667 TRIM33Q9UPN9 1127 aa11.72□□□□□ -0.53
SHC1-211ENST00000490667 IFT52Q9Y366 437 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms