RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 PTGFRP43088 359 aa3.52□□□□□ -1.85
HMGB1P38-201ENST00000490557 CDKN1BP46527 198 aa3.52□□□□□ -1.85
HMGB1P38-201ENST00000490557 CNTN2Q02246 1040 aa3.52□□□□□ -1.85
HMGB1P38-201ENST00000490557 PLOD1Q02809 727 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P38-201ENST00000490557 FGL1Q08830 312 aa3.52□□□□□ -1.85
HMGB1P38-201ENST00000490557 PRAMEF5Q5TYX0 476 aa3.52□□□□□ -1.85
HMGB1P38-201ENST00000490557 ATF7IP2Q5U623 682 aa3.52□□□□□ -1.85
HMGB1P38-201ENST00000490557 PRAMEF6Q5VXH4 476 aa3.52□□□□□ -1.85
HMGB1P38-201ENST00000490557 TTC23Q5W5X9 447 aa3.52□□□□□ -1.85
HMGB1P38-201ENST00000490557 SYT10Q6XYQ8 523 aa3.52□□□□□ -1.85
HMGB1P38-201ENST00000490557 MOB1BQ7L9L4 216 aa3.52□□□□□ -1.85
HMGB1P38-201ENST00000490557 C16orf62Q7Z3J2 963 aa3.52□□□□□ -1.85
HMGB1P38-201ENST00000490557 ZNF677Q86XU0 584 aa3.52□□□□□ -1.85
HMGB1P38-201ENST00000490557 TCAIMQ8N3R3 496 aa3.52□□□□□ -1.85
HMGB1P38-201ENST00000490557 TRIML2Q8N7C3 387 aa3.52□□□□□ -1.85
HMGB1P38-201ENST00000490557 MCUR1Q96AQ8 359 aa3.52□□□□□ -1.85
HMGB1P38-201ENST00000490557 C12orf66Q96MD2 445 aa3.52□□□□□ -1.85
HMGB1P38-201ENST00000490557 CHP1Q99653 195 aa3.52□□□□□ -1.85
HMGB1P38-201ENST00000490557 NPAS2Q99743 824 aa3.52□□□□□ -1.85
HMGB1P38-201ENST00000490557 TMEM43Q9BTV4 400 aa3.52□□□□□ -1.85
HMGB1P38-201ENST00000490557 DPH7Q9BTV6 452 aa3.52□□□□□ -1.85
HMGB1P38-201ENST00000490557 TM2D1Q9BX74 207 aa3.52□□□□□ -1.85
HMGB1P38-201ENST00000490557 PDFQ9HBH1 243 aa3.52□□□□□ -1.85
HMGB1P38-201ENST00000490557 NEK6Q9HC98 313 aa3.52□□□□□ -1.85
HMGB1P38-201ENST00000490557 MEPEQ9NQ76 525 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P38-201ENST00000490557 IL17CQ9P0M4 197 aa3.52□□□□□ -1.85
HMGB1P38-201ENST00000490557 SEC14L3Q9UDX4 400 aa3.52□□□□□ -1.85
HMGB1P38-201ENST00000490557 FOXJ3Q9UPW0 622 aa3.52□□□□□ -1.85
HMGB1P38-201ENST00000490557 SLCO1B1Q9Y6L6 691 aa3.52□□□□□ -1.85
HMGB1P38-201ENST00000490557 TNRQ92752 1358 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 PHLPP2Q6ZVD8 1323 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 CFAP65Q6ZU64 1925 aaKnown RBP3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 LOC100506127A0A0U1RQW1 187 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 BTBD17A6NE02 478 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 FAM220BPB1ANY3 271 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 TCP11X1B4DZS4 312 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 SUPT3HB4E1H0 165 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 ZNF264O43296 627 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 RAMP1O60894 148 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 ZNF254O75437 659 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 SERF1AO75920 110 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 LYPD3O95274 346 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 FGFR1OPO95684 399 aaKnown RBP3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 MBD3O95983 291 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 CSTAP01040 98 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 P0C879 139 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 TROVE2P10155 538 aaKnown RBP eCLIP3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 ZNF19P17023 458 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 CHMLP26374 656 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 CD1BP29016 333 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 AXLP30530 894 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 RPL4P36578 427 aaKnown RBP3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 GRIA1P42261 906 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 OR3A4PP47883 348 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 STARP49675 285 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 SLC26A2P50443 739 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 RPL32P62910 135 aaKnown RBP3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 CSTF1Q05048 431 aaKnown RBP3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 BST1Q10588 318 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 SELPLGQ14242 412 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 TRIP10Q15642 601 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 DCAF4L1Q3SXM0 396 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 Q3ZCU0 254 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 ZNF311Q5JNZ3 666 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 C10orf120Q5SQS8 335 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 PIP5KL1Q5T9C9 394 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 ASPHD2Q6ICH7 369 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 ERICH5Q6P6B1 374 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 CBLN3Q6UW01 205 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 KDM7AQ6ZMT4 941 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 BZW1Q7L1Q6 419 aaKnown RBP3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 COMTD1Q86VU5 262 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 CDR2LQ86X02 465 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 ECHDC2Q86YB7 292 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 OFCC1Q8IZS5 231 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 FAM9CQ8IZT9 166 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 CSNK1A1LQ8N752 337 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 Q8N7P7 452 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 SPATA4Q8NEY3 305 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 OR2L5Q8NG80 312 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 OR9A1PQ8NGU1 263 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 FAM81AQ8TBF8 368 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 SLC25A36Q96CQ1 311 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 VPS35Q96QK1 796 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 MAGT1Q9H0U3 335 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 CHRAC1Q9NRG0 131 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 EHFQ9NZC4 300 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 GALPQ9UBC7 116 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 ANGPTL2Q9UKU9 493 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 ABCG2Q9UNQ0 655 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 PDE10AQ9Y233 779 aa3.51□□□□□ -1.85
HMGB1P38-201ENST00000490557 OR6C74A6NCV1 312 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 EPOPA6NHQ4 379 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 WASHC1A8K0Z3 465 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 WASH3PC4AMC7 463 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 E9PLD3 99 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 K7ERQ8 282 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 RNF13O43567 381 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 FCMRO60667 390 aa3.5□□□□□ -1.85
HMGB1P38-201ENST00000490557 CDH16O75309 829 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms