RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 ARPINQ7Z6K5 226 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 GGNQ86UU5 652 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 SLC51BQ86UW2 128 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 THEM5Q8N1Q8 247 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 ELMOD1Q8N336 334 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 NATD1Q8N6N6 113 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 OR1L3Q8NH93 324 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 SETD7Q8WTS6 366 aaKnown RBP2.53□□□□□ -2
UBXN4-208ENST00000490163 SCFD1Q8WVM8 642 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 ERGIC2Q96RQ1 377 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 SEMA6AQ9H2E6 1030 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 FKRPQ9H9S5 495 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 ZC4H2Q9NQZ6 224 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 GPATCH2LQ9NWQ4 482 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 RSL24D1Q9UHA3 163 aaKnown RBP2.53□□□□□ -2
UBXN4-208ENST00000490163 VANGL2Q9ULK5 521 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 GAKO14976 1311 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 TRBV9A0A0B4J1U6 114 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 A0A1W2PQ72 361 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 TTC26A0AVF1 554 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 YJEFN3A6XGL0 299 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 CCRL2O00421 344 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 STX7O15400 261 aaKnown RBP2.53□□□□□ -2
UBXN4-208ENST00000490163 PRKRAO75569 313 aaKnown RBP2.53□□□□□ -2
UBXN4-208ENST00000490163 ZBTB11O95625 1053 aaPredicted RBP2.53□□□□□ -2
UBXN4-208ENST00000490163 LGI1O95970 557 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 TFPTP0C1Z6 253 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 HPGDP15428 266 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 GATA1P15976 413 aaPredicted RBP2.53□□□□□ -2
UBXN4-208ENST00000490163 NCF2P19878 526 aaPredicted RBP2.53□□□□□ -2
UBXN4-208ENST00000490163 HMGB2P26583 209 aaKnown RBP2.53□□□□□ -2
UBXN4-208ENST00000490163 CERS1P27544 350 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 MATKP42679 507 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 ESRRGP62508 458 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 CSNK2BP67870 215 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 CDK16Q00536 496 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 IL9RQ01113 521 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 ZNF829Q3KNS6 432 aaPredicted RBP2.53□□□□□ -2
UBXN4-208ENST00000490163 ACSBG2Q5FVE4 666 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 KATNAL2Q8IYT4 538 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 SLC22A15Q8IZD6 547 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 SLC38A6Q8IZM9 456 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 FAM9CQ8IZT9 166 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 LRRC57Q8N9N7 239 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 KCNG3Q8TAE7 436 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 LKAAEAR1Q8TD35 194 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 MS4A14Q96JA4 679 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 PRRC1Q96M27 445 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 TSNARE1Q96NA8 513 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 BIRC8Q96P09 236 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 HBEGFQ99075 208 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 CIB1Q99828 191 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 DHRS9Q9BPW9 319 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 TDRD1Q9BXT4 1180 aaKnown RBP2.53□□□□□ -2
UBXN4-208ENST00000490163 CALN1Q9BXU9 219 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 SLC39A8Q9C0K1 460 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 MTHFD2LQ9H903 347 aaPredicted RBP2.53□□□□□ -2
UBXN4-208ENST00000490163 NHEJ1Q9H9Q4 299 aaPredicted RBP2.53□□□□□ -2
UBXN4-208ENST00000490163 ELOVL3Q9HB03 270 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 ECHDC1Q9NTX5 307 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 GPR83Q9NYM4 423 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 EMC3Q9P0I2 261 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 INSL6Q9Y581 213 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 MYH1P12882 1939 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 MAP3K15Q6ZN16 1313 aa2.53□□□□□ -2
UBXN4-208ENST00000490163 ZNF236Q9UL36 1845 aa2.53□□□□□ -2.01
UBXN4-208ENST00000490163 RLFQ13129 1914 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 MYH2Q9UKX2 1941 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 A0A1W2PRB8 838 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 TMEM120BA0PK00 339 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 WDR91A4D1P6 747 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 B8ZZF3 427 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 K7ENP7 123 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 RAD51BO15315 384 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 ZIC3O60481 467 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 KLHL2O95198 593 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 TNFAIP8O95379 198 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 IGKV5-2P06315 115 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 KRT7P08729 469 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 FAM228BP0C875 321 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 UQCRBP14927 111 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 LIFP15018 202 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 AADACP22760 399 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 RCVRNP35243 200 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 SLCO1A2P46721 670 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 TFPI2P48307 235 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 CSNK1EP49674 416 aaKnown RBP2.52□□□□□ -2.01
UBXN4-208ENST00000490163 NUDT6P53370 316 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 GAS1P54826 345 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 RPL26P61254 145 aaKnown RBP2.52□□□□□ -2.01
UBXN4-208ENST00000490163 ERVK11-1P61568 191 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 XIAPP98170 497 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 PAX5Q02548 391 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 LGALS3BPQ08380 585 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 SPCS2Q15005 226 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 HLA-BQ31612 363 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 TRMT5Q32P41 509 aaKnown RBP2.52□□□□□ -2.01
UBXN4-208ENST00000490163 DMKNQ6E0U4 476 aaPredicted RBP2.52□□□□□ -2.01
UBXN4-208ENST00000490163 CDC42EP5Q6NZY7 148 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 SLC27A4Q6P1M0 643 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms