RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 PCDH9Q9HC56 1237 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 CHRAC1Q9NRG0 131 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 NUDT15Q9NV35 164 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 PSMC3IPQ9P2W1 217 aaPredicted RBP2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 SLC22A14Q9Y267 594 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 PAM16Q9Y3D7 125 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 BZW2Q9Y6E2 419 aaKnown RBP2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 QSER1Q2KHR3 1735 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 CARMIL3Q8ND23 1372 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 COL4A1P02462 1669 aa2.74□□□□□ -1.97
DEPDC1-204ENST00000489862 FANCIQ9NVI1 1328 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 MAPK8IP3Q9UPT6 1336 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 C4AP0C0L4 1744 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 KIAA1551Q9HCM1 1747 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 CEP350Q5VT06 3117 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 PPIAL4EA0A075B759 164 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 ZNF840PA6NDX5 716 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 GOLGA6L9A6NEM1 432 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 A8MVM7 634 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 E7ENQ6 273 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 LMO7DNF2Z398 122 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 G3V4G9 280 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 H3BTX0 84 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 OR7A17O14581 309 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 CASKO14936 926 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 ZNHIT1O43257 154 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 KDELR3O43731 214 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 PMS2P2O95744 297 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 SNAI1O95863 264 aaPredicted RBP2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 P04436 131 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 S100A6P06703 90 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 LYNP07948 512 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 PPIAL4FP0DN26 164 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 IGHV4-30-4P0DP06 118 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 IGHV4-31P0DP07 118 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 CCL2P13500 99 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 UQCRBP14927 111 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 EIF2S2P20042 333 aaKnown RBP2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 TBXA2RP21731 343 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 RORAP35398 523 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 CFHR2P36980 270 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 HAAOP46952 286 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 OR3A3P47888 321 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 POU3F4P49335 361 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 KRTAP10-8P60410 259 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 RPL27P61353 136 aaKnown RBP2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 ERVK-8P63133 956 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 GSTO1P78417 241 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 SELENBP1Q13228 472 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 FASTKD3Q14CZ7 662 aaKnown RBP2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 FGD3Q5JSP0 725 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 STPG1Q5TH74 334 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 GPR157Q5UAW9 335 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 PAQR6Q6TCH4 344 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 SASS6Q6UVJ0 657 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 Q6ZRG5 221 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 COPS6Q7L5N1 327 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 H2BFWTQ7Z2G1 175 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 LRRC8AQ8IWT6 810 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 LINC00518Q8N0U6 118 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 ZNF444Q8N0Y2 327 aaPredicted RBP2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 OR7A2PQ8NGA2 310 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 CNIH3Q8TBE1 160 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 PDCD6IPQ8WUM4 868 aaKnown RBP2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 ARNTL2Q8WYA1 636 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 TANKQ92844 425 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 KIFAP3Q92845 792 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 CD101Q93033 1021 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 PNPLA2Q96AD5 504 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 ALS2CR12Q96Q35 445 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 MBOAT4Q96T53 435 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 CDCA3Q99618 268 aaPredicted RBP2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 COPS8Q99627 209 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 EPYCQ99645 322 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 OVOL2Q9BRP0 275 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 GPR174Q9BXC1 333 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 NRN1Q9NPD7 142 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 PRSS16Q9NQE7 514 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 PXMP2Q9NR77 195 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 OLFML3Q9NRN5 406 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 EURLQ9NYK6 297 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 STX18Q9P2W9 335 aaKnown RBP2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 ZDHHC2Q9UIJ5 367 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 PPIAL4AQ9Y536 164 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 NPTNQ9Y639 398 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 FKBP7Q9Y680 259 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 WDR81Q562E7 1941 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 LRP5O75197 1615 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 UBN2Q6ZU65 1347 aa2.73□□□□□ -1.97
DEPDC1-204ENST00000489862 A0A0G2JLW4 131 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 LOC101059948A0A1B0GTJ6 334 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 FBLL1A6NHQ2 334 aaKnown RBP2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 LILRA5A6NI73 299 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 NR5A2O00482 541 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 ANXA9O76027 345 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 DFFBO76075 338 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 ANP32DO95626 131 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 ECDO95905 644 aaPredicted RBP2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 IGKV5-2P06315 115 aa2.72□□□□□ -1.97
DEPDC1-204ENST00000489862 GSTA2P09210 222 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms