RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 VRK2Q86Y07 508 aa12.79□□□□□ -0.36
BRCA1-218ENST00000489037 KRT73Q86Y46 540 aa12.79□□□□□ -0.36
BRCA1-218ENST00000489037 SLC43A2Q8N370 569 aa12.79□□□□□ -0.36
BRCA1-218ENST00000489037 OR6K3Q8NGY3 331 aa12.79□□□□□ -0.36
BRCA1-218ENST00000489037 ROBO4Q8WZ75 1007 aa12.79□□□□□ -0.36
BRCA1-218ENST00000489037 ZHX1-C8orf76Q96EF9 292 aa12.79□□□□□ -0.36
BRCA1-218ENST00000489037 LURAP1Q96LR2 239 aa12.79□□□□□ -0.36
BRCA1-218ENST00000489037 SPATA5L1Q9BVQ7 753 aa12.79□□□□□ -0.36
BRCA1-218ENST00000489037 SLC52A3Q9NQ40 469 aa12.79□□□□□ -0.36
BRCA1-218ENST00000489037 DNAJB12Q9NXW2 375 aaKnown RBP12.79□□□□□ -0.36
BRCA1-218ENST00000489037 GALNT8Q9NY28 637 aa12.79□□□□□ -0.36
BRCA1-218ENST00000489037 ELOVL5Q9NYP7 299 aa12.79□□□□□ -0.36
BRCA1-218ENST00000489037 SLC25A37Q9NYZ2 338 aa12.79□□□□□ -0.36
BRCA1-218ENST00000489037 CRIM1Q9NZV1 1036 aa12.79□□□□□ -0.36
BRCA1-218ENST00000489037 VAPAQ9P0L0 249 aa12.79□□□□□ -0.36
BRCA1-218ENST00000489037 SLAMF8Q9P0V8 285 aa12.79□□□□□ -0.36
BRCA1-218ENST00000489037 CHRNA9Q9UGM1 479 aa12.79□□□□□ -0.36
BRCA1-218ENST00000489037 NDRG3Q9UGV2 375 aa12.79□□□□□ -0.36
BRCA1-218ENST00000489037 CLEC4AQ9UMR7 237 aa12.79□□□□□ -0.36
BRCA1-218ENST00000489037 ZNF443Q9Y2A4 671 aaPredicted RBP12.79□□□□□ -0.36
BRCA1-218ENST00000489037 A0A1W2PNR3 127 aa12.78□□□□□ -0.36
BRCA1-218ENST00000489037 SULT2B1O00204 365 aa12.78□□□□□ -0.36
BRCA1-218ENST00000489037 FAAHO00519 579 aa12.78□□□□□ -0.36
BRCA1-218ENST00000489037 CASKO14936 926 aa12.78□□□□□ -0.36
BRCA1-218ENST00000489037 SS18L1O75177 396 aaPredicted RBP12.78□□□□□ -0.36
BRCA1-218ENST00000489037 BCAS1O75363 584 aaPredicted RBP12.78□□□□□ -0.36
BRCA1-218ENST00000489037 PRKD3O94806 890 aa12.78□□□□□ -0.36
BRCA1-218ENST00000489037 POU2F1P14859 743 aa12.78□□□□□ -0.36
BRCA1-218ENST00000489037 ENPP1P22413 925 aa12.78□□□□□ -0.36
BRCA1-218ENST00000489037 SLC6A2P23975 617 aa12.78□□□□□ -0.36
BRCA1-218ENST00000489037 MDH1P40925 334 aaKnown RBP12.78□□□□□ -0.36
BRCA1-218ENST00000489037 CLK1P49759 484 aaKnown RBP12.78□□□□□ -0.36
BRCA1-218ENST00000489037 POLR2HP52434 150 aaKnown RBP12.78□□□□□ -0.36
BRCA1-218ENST00000489037 CDK6Q00534 326 aa12.78□□□□□ -0.36
BRCA1-218ENST00000489037 NFYCQ13952 458 aa12.78□□□□□ -0.36
BRCA1-218ENST00000489037 MAPRE2Q15555 327 aa12.78□□□□□ -0.36
BRCA1-218ENST00000489037 ZNF239Q16600 458 aaKnown RBP12.78□□□□□ -0.36
BRCA1-218ENST00000489037 SYT14P1Q58G82 188 aa12.78□□□□□ -0.36
BRCA1-218ENST00000489037 ZNF311Q5JNZ3 666 aa12.78□□□□□ -0.36
BRCA1-218ENST00000489037 RPS26P11Q5JNZ5 115 aaPredicted RBP12.78□□□□□ -0.36
BRCA1-218ENST00000489037 RNF220Q5VTB9 566 aa12.78□□□□□ -0.36
BRCA1-218ENST00000489037 FBXW10Q5XX13 1052 aa12.78□□□□□ -0.36
BRCA1-218ENST00000489037 REEP3Q6NUK4 255 aa12.78□□□□□ -0.36
BRCA1-218ENST00000489037 ZNF836Q6ZNA1 936 aa12.78□□□□□ -0.36
BRCA1-218ENST00000489037 FCRLAQ7L513 359 aa12.78□□□□□ -0.36
BRCA1-218ENST00000489037 TACO1Q9BSH4 297 aaKnown RBP12.78□□□□□ -0.36
BRCA1-218ENST00000489037 SPATA9Q9BWV2 254 aa12.78□□□□□ -0.36
BRCA1-218ENST00000489037 OPN3Q9H1Y3 402 aaPredicted RBP12.78□□□□□ -0.36
BRCA1-218ENST00000489037 ZNF385DQ9H6B1 395 aa12.78□□□□□ -0.36
BRCA1-218ENST00000489037 CCDC134Q9H6E4 229 aa12.78□□□□□ -0.36
BRCA1-218ENST00000489037 BCL2L10Q9HD36 194 aa12.78□□□□□ -0.36
BRCA1-218ENST00000489037 CTPS2Q9NRF8 586 aa12.78□□□□□ -0.36
BRCA1-218ENST00000489037 GMEB1Q9Y692 573 aa12.78□□□□□ -0.36
BRCA1-218ENST00000489037 DSPPQ9NZW4 1301 aa12.78□□□□□ -0.36
BRCA1-218ENST00000489037 ADGRG4Q8IZF6 3080 aa12.77□□□□□ -0.36
BRCA1-218ENST00000489037 CDHR4A6H8M9 788 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 PGM3O95394 542 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 NUDT7P0C024 238 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 ARAFP10398 606 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 EPXP11678 715 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 ETS2P15036 469 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 HOXB9P17482 250 aaPredicted RBP12.77□□□□□ -0.37
BRCA1-218ENST00000489037 GPX2P18283 190 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 CCNA2P20248 432 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 CD79BP40259 229 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 SLC1A3P43003 542 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 PCYT1AP49585 367 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 MAP2K6P52564 334 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 SF3A3Q12874 501 aaKnown RBP eCLIP12.77□□□□□ -0.37
BRCA1-218ENST00000489037 EPS8Q12929 822 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 MAPK11Q15759 364 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 MMEL1Q495T6 779 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 RUNDC3AQ59EK9 446 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 TMPPEQ6ZT21 453 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 MSRB3Q8IXL7 192 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 DPP10Q8N608 796 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 ZNF610Q8N9Z0 462 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 NFKBIDQ8NI38 313 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 LINC01560Q8TB33 94 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 RNF128Q8TEB7 428 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 MAL2Q969L2 176 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 ZNF524Q96C55 264 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 DDIT4LQ96D03 193 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 ZNF607Q96SK3 696 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 CCDC106Q9BWC9 280 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 SRXN1Q9BYN0 137 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 COQ10BQ9H8M1 238 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 GP6Q9HCN6 339 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 PLSCR4Q9NRQ2 329 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 RLIMQ9NVW2 624 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 KLHL14Q9P2G3 628 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 KLHL9Q9P2J3 617 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 HDGFL3Q9Y3E1 203 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 ABCA4P78363 2273 aa12.77□□□□□ -0.37
BRCA1-218ENST00000489037 FREM1Q5H8C1 2179 aa12.76□□□□□ -0.37
BRCA1-218ENST00000489037 TRBV5-3A0A0A0MS03 114 aa12.76□□□□□ -0.37
BRCA1-218ENST00000489037 TMED7-TICAM2A0A0A6YYA0 188 aa12.76□□□□□ -0.37
BRCA1-218ENST00000489037 AP3D1O14617 1153 aa12.76□□□□□ -0.37
BRCA1-218ENST00000489037 SERPINB7O75635 380 aa12.76□□□□□ -0.37
BRCA1-218ENST00000489037 CXCR1P25024 350 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms