RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 OCEL1Q9H607 264 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 BCL2L10Q9HD36 194 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 ACOT13Q9NPJ3 140 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 KLHL1Q9NR64 748 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 RASSF1Q9NS23 344 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 ACAD8Q9UKU7 415 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 B3GNT3Q9Y2A9 372 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 TRAV17A0A0B4J275 112 aa17.68■□□□□ 0.42
CCM2-216ENST00000488727 FFAR1O14842 300 aa17.68■□□□□ 0.42
CCM2-216ENST00000488727 SLC28A2O43868 658 aa17.68■□□□□ 0.42
CCM2-216ENST00000488727 SERPINB7O75635 380 aa17.68■□□□□ 0.42
CCM2-216ENST00000488727 OXSR1O95747 527 aaPredicted RBP17.68■□□□□ 0.42
CCM2-216ENST00000488727 INHBBP09529 407 aa17.68■□□□□ 0.42
CCM2-216ENST00000488727 ZNF182P17025 639 aaPredicted RBP17.68■□□□□ 0.42
CCM2-216ENST00000488727 MAP2K4P45985 399 aa17.68■□□□□ 0.42
CCM2-216ENST00000488727 ZNF169Q14929 603 aaPredicted RBP17.68■□□□□ 0.42
CCM2-216ENST00000488727 CTF1Q16619 201 aa17.68■□□□□ 0.42
CCM2-216ENST00000488727 OLIG3Q7RTU3 272 aa17.68■□□□□ 0.42
CCM2-216ENST00000488727 FCGR1BQ92637 280 aa17.68■□□□□ 0.42
CCM2-216ENST00000488727 UBE2FQ969M7 185 aa17.68■□□□□ 0.42
CCM2-216ENST00000488727 SCMH1Q96GD3 660 aa17.68■□□□□ 0.42
CCM2-216ENST00000488727 RSPO3Q9BXY4 272 aaPredicted RBP17.68■□□□□ 0.42
CCM2-216ENST00000488727 FLRT3Q9NZU0 649 aa17.68■□□□□ 0.42
CCM2-216ENST00000488727 PSORS1C1Q9UIG5 152 aa17.68■□□□□ 0.42
CCM2-216ENST00000488727 NINQ8N4C6 2090 aa17.68■□□□□ 0.42
CCM2-216ENST00000488727 BCAS1O75363 584 aaPredicted RBP17.67■□□□□ 0.42
CCM2-216ENST00000488727 SOX30O94993 753 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 ADAP00813 363 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 SP1P08047 785 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 AQP6Q13520 282 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 GANABQ14697 944 aaKnown RBP17.67■□□□□ 0.42
CCM2-216ENST00000488727 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.67■□□□□ 0.42
CCM2-216ENST00000488727 PLEKHN1Q494U1 663 aaPredicted RBP17.67■□□□□ 0.42
CCM2-216ENST00000488727 ZNF766Q5HY98 468 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 UBE2UQ5VVX9 321 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 PRAMEF8Q5VWM4 474 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 PRAMEF7Q5VXH5 474 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 BICRALQ6AI39 1079 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 Q6ZPB1 254 aaPredicted RBP17.67■□□□□ 0.42
CCM2-216ENST00000488727 NUP54Q7Z3B4 507 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 SDF2Q99470 211 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 TREX2Q9BQ50 279 aaPredicted RBP17.67■□□□□ 0.42
CCM2-216ENST00000488727 RHNO1Q9BSD3 238 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 NMNAT1Q9HAN9 279 aaPredicted RBP17.67■□□□□ 0.42
CCM2-216ENST00000488727 DEPPQ9NTK1 212 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 LUZP4Q9P127 313 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 DSPPQ9NZW4 1301 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 A0A0G2JMM0 328 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 A0A1W2PPB8 328 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 A0A1W2PRS3 328 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 KIR3DP1A8MWS1 328 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 FAAHO00519 579 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 NME2P1O60361 137 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 ICOSLGO75144 302 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 AGR2O95994 175 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 CD46P15529 392 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 NME2P22392 152 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 ENTPD1P49961 510 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 SMIM11AP58511 58 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 GNA13Q14344 377 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 SYPL1Q16563 259 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 MOGQ16653 247 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 ARHGAP11BQ3KRB8 267 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 PRAMEF20Q5VT98 475 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 SLC22A10Q63ZE4 541 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 SLC25A25Q6KCM7 469 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 GALNTL5Q7Z4T8 443 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 KRT73Q86Y46 540 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 AQP11Q8NBQ7 271 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 PNPLA2Q96AD5 504 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 PROK2Q9HC23 129 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 ZNF226Q9NYT6 803 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 SEC14L3Q9UDX4 400 aa17.67■□□□□ 0.42
CCM2-216ENST00000488727 MRTO4Q9UKD2 239 aaKnown RBP17.67■□□□□ 0.42
CCM2-216ENST00000488727 ZAR1LA6NP61 321 aa17.66■□□□□ 0.42
CCM2-216ENST00000488727 G3V3Y1 287 aa17.66■□□□□ 0.42
CCM2-216ENST00000488727 TP53I11O14683 189 aa17.66■□□□□ 0.42
CCM2-216ENST00000488727 FCMRO60667 390 aa17.66■□□□□ 0.42
CCM2-216ENST00000488727 ZIC2O95409 532 aaPredicted RBP17.66■□□□□ 0.42
CCM2-216ENST00000488727 CRISP3P54108 245 aa17.66■□□□□ 0.42
CCM2-216ENST00000488727 PSMD4P55036 377 aaKnown RBP17.66■□□□□ 0.42
CCM2-216ENST00000488727 TBCEQ15813 527 aaPredicted RBP17.66■□□□□ 0.42
CCM2-216ENST00000488727 KLHL17Q6TDP4 642 aa17.66■□□□□ 0.42
CCM2-216ENST00000488727 AHSA2Q719I0 299 aa17.66■□□□□ 0.42
CCM2-216ENST00000488727 C16orf62Q7Z3J2 963 aa17.66■□□□□ 0.42
CCM2-216ENST00000488727 CCDC103Q8IW40 242 aa17.66■□□□□ 0.42
CCM2-216ENST00000488727 Q8NA96 180 aa17.66■□□□□ 0.42
CCM2-216ENST00000488727 LSM14AQ8ND56 463 aaKnown RBP17.66■□□□□ 0.42
CCM2-216ENST00000488727 MYDGFQ969H8 173 aa17.66■□□□□ 0.42
CCM2-216ENST00000488727 C5orf34Q96MH7 638 aa17.66■□□□□ 0.42
CCM2-216ENST00000488727 SPATA5L1Q9BVQ7 753 aa17.66■□□□□ 0.42
CCM2-216ENST00000488727 TMCC3Q9ULS5 477 aa17.66■□□□□ 0.42
CCM2-216ENST00000488727 MGAT4BQ9UQ53 548 aa17.66■□□□□ 0.42
CCM2-216ENST00000488727 PCDHGB6Q9Y5F9 930 aa17.66■□□□□ 0.42
CCM2-216ENST00000488727 SLC22A1O15245 554 aa17.65■□□□□ 0.42
CCM2-216ENST00000488727 MPZL2O60487 215 aa17.65■□□□□ 0.42
CCM2-216ENST00000488727 FADS2O95864 444 aaKnown RBP17.65■□□□□ 0.42
CCM2-216ENST00000488727 AK1P00568 194 aa17.65■□□□□ 0.42
CCM2-216ENST00000488727 NR2F1P10589 423 aa17.65■□□□□ 0.42
CCM2-216ENST00000488727 ELAVL4P26378 380 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms