RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 GARNL3Q5VVW2 1013 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 PYHIN1Q6K0P9 492 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 LCTLQ6UWM7 567 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 ZNF836Q6ZNA1 936 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 NDUFAF7Q7L592 441 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 LSM14AQ8ND56 463 aaKnown RBP11.47□□□□□ -0.57
HSPG2-211ENST00000486901 CHFRQ96EP1 664 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 TSSK2Q96PF2 358 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 GSX2Q9BZM3 304 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 WDR26Q9H7D7 661 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 MARK1Q9P0L2 795 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 RPS6KB2Q9UBS0 482 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 KIAA1671Q9BY89 1806 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 LOC100509620A0A075B734 347 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 LINC00862A6NCI5 91 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 LATS1O95835 1130 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 HIST1H1TP22492 207 aaPredicted RBP11.47□□□□□ -0.57
HSPG2-211ENST00000486901 EDNRAP25101 427 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 HTR2AP28223 471 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 NUDT1P36639 197 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 MTNR1BP49286 362 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 C2orf68Q2NKX9 166 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 OR5M1Q8NGP8 315 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 SNX33Q8WV41 574 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 WNT2BQ93097 391 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 ELP4Q96EB1 424 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 WDR34Q96EX3 536 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 DMRTA2Q96SC8 542 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 PINK1Q9BXM7 581 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 SDHAF2Q9NX18 166 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 NUP50Q9UKX7 468 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 NUBP2Q9Y5Y2 271 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 MDC1Q14676 2089 aaKnown RBP11.46□□□□□ -0.57
HSPG2-211ENST00000486901 TRBV2A0A0J9YWF9 115 aa11.46□□□□□ -0.57
HSPG2-211ENST00000486901 TRIM3O75382 744 aaPredicted RBP11.46□□□□□ -0.57
HSPG2-211ENST00000486901 LPLP06858 475 aa11.46□□□□□ -0.57
HSPG2-211ENST00000486901 F3P13726 295 aa11.46□□□□□ -0.57
HSPG2-211ENST00000486901 CPMP14384 443 aa11.46□□□□□ -0.57
HSPG2-211ENST00000486901 CST5P28325 142 aaPredicted RBP11.46□□□□□ -0.57
HSPG2-211ENST00000486901 PSMA6P60900 246 aaKnown RBP11.46□□□□□ -0.57
HSPG2-211ENST00000486901 PRR5P85299 388 aa11.46□□□□□ -0.57
HSPG2-211ENST00000486901 DUSP6Q16828 381 aa11.46□□□□□ -0.57
HSPG2-211ENST00000486901 ZAR1Q86SH2 424 aa11.46□□□□□ -0.57
HSPG2-211ENST00000486901 CRIPAKQ8N1N5 446 aa11.46□□□□□ -0.57
HSPG2-211ENST00000486901 DVL3Q92997 716 aaPredicted RBP11.46□□□□□ -0.57
HSPG2-211ENST00000486901 ARL6Q9H0F7 186 aa11.46□□□□□ -0.57
HSPG2-211ENST00000486901 NT5DC2Q9H857 520 aa11.46□□□□□ -0.57
HSPG2-211ENST00000486901 IL21RQ9HBE5 538 aa11.46□□□□□ -0.57
HSPG2-211ENST00000486901 TMEM138Q9NPI0 162 aa11.46□□□□□ -0.57
HSPG2-211ENST00000486901 NFKBIL1Q9UBC1 381 aaPredicted RBP11.46□□□□□ -0.57
HSPG2-211ENST00000486901 SPAG17Q6Q759 2223 aa11.46□□□□□ -0.57
HSPG2-211ENST00000486901 ABHD14A-ACY1A0A1B0GW23 586 aa11.46□□□□□ -0.58
HSPG2-211ENST00000486901 GRXCR1A8MXD5 290 aa11.46□□□□□ -0.58
HSPG2-211ENST00000486901 FLRT2O43155 660 aa11.46□□□□□ -0.58
HSPG2-211ENST00000486901 PAPLNO95428 1278 aa11.46□□□□□ -0.58
HSPG2-211ENST00000486901 ADRB3P13945 408 aa11.46□□□□□ -0.58
HSPG2-211ENST00000486901 DRD2P14416 443 aa11.46□□□□□ -0.58
HSPG2-211ENST00000486901 GLULP15104 373 aa11.46□□□□□ -0.58
HSPG2-211ENST00000486901 RBMS1P29558 406 aaKnown RBP11.46□□□□□ -0.58
HSPG2-211ENST00000486901 ZNF85Q03923 595 aa11.46□□□□□ -0.58
HSPG2-211ENST00000486901 HTR4Q13639 388 aa11.46□□□□□ -0.58
HSPG2-211ENST00000486901 MLF2Q15773 248 aaPredicted RBP11.46□□□□□ -0.58
HSPG2-211ENST00000486901 MRPL2Q5T653 305 aaKnown RBP11.46□□□□□ -0.58
HSPG2-211ENST00000486901 PRSS42Q7Z5A4 293 aa11.46□□□□□ -0.58
HSPG2-211ENST00000486901 OR11G2Q8NGC1 345 aa11.46□□□□□ -0.58
HSPG2-211ENST00000486901 OR52N1Q8NH53 320 aa11.46□□□□□ -0.58
HSPG2-211ENST00000486901 C1orf216Q8TAB5 229 aa11.46□□□□□ -0.58
HSPG2-211ENST00000486901 CNOT9Q92600 299 aaKnown RBP11.46□□□□□ -0.58
HSPG2-211ENST00000486901 TTYH1Q9H313 450 aaPredicted RBP11.46□□□□□ -0.58
HSPG2-211ENST00000486901 MRPS30Q9NP92 439 aaKnown RBP11.46□□□□□ -0.58
HSPG2-211ENST00000486901 EMC7Q9NPA0 242 aa11.46□□□□□ -0.58
HSPG2-211ENST00000486901 NOX4Q9NPH5 578 aa11.46□□□□□ -0.58
HSPG2-211ENST00000486901 APOBEC3BQ9UH17 382 aaKnown RBP11.46□□□□□ -0.58
HSPG2-211ENST00000486901 ZNF780BQ9Y6R6 833 aa11.46□□□□□ -0.58
HSPG2-211ENST00000486901 A0A0G2JPF8 293 aa11.46□□□□□ -0.58
HSPG2-211ENST00000486901 HNRNPCL3B7ZW38 293 aa11.46□□□□□ -0.58
HSPG2-211ENST00000486901 SELENOFO60613 162 aa11.46□□□□□ -0.58
HSPG2-211ENST00000486901 CSN2P05814 226 aa11.46□□□□□ -0.58
HSPG2-211ENST00000486901 HNRNPCL4P0DMR1 293 aa11.46□□□□□ -0.58
HSPG2-211ENST00000486901 LAMP2P13473 410 aa11.46□□□□□ -0.58
HSPG2-211ENST00000486901 GDI2P50395 445 aaKnown RBP11.46□□□□□ -0.58
HSPG2-211ENST00000486901 AKR1D1P51857 326 aa11.46□□□□□ -0.58
HSPG2-211ENST00000486901 BTG1P62324 171 aa11.46□□□□□ -0.58
HSPG2-211ENST00000486901 DEFA5Q01523 94 aa11.46□□□□□ -0.58
HSPG2-211ENST00000486901 HEPHL1Q6MZM0 1159 aa11.46□□□□□ -0.58
HSPG2-211ENST00000486901 C11orf88Q6PI97 169 aa11.46□□□□□ -0.58
HSPG2-211ENST00000486901 ERMAPQ96PL5 475 aaPredicted RBP11.46□□□□□ -0.58
HSPG2-211ENST00000486901 TMEM106CQ9BVX2 250 aa11.46□□□□□ -0.58
HSPG2-211ENST00000486901 STARD5Q9NSY2 213 aa11.46□□□□□ -0.58
HSPG2-211ENST00000486901 ASB6Q9NWX5 421 aa11.46□□□□□ -0.58
HSPG2-211ENST00000486901 GTF2A1LQ9UNN4 478 aa11.46□□□□□ -0.58
HSPG2-211ENST00000486901 RABL2BQ9UNT1 228 aa11.46□□□□□ -0.58
HSPG2-211ENST00000486901 AHCTF1Q8WYP5 2266 aa11.45□□□□□ -0.58
HSPG2-211ENST00000486901 A0A0A6YYD5 115 aa11.45□□□□□ -0.58
HSPG2-211ENST00000486901 A0A1B0GVI7 797 aa11.45□□□□□ -0.58
HSPG2-211ENST00000486901 C7orf66A4D0T2 115 aa11.45□□□□□ -0.58
HSPG2-211ENST00000486901 G3V3Q6 166 aa11.45□□□□□ -0.58
HSPG2-211ENST00000486901 IGHA1P01876 353 aa11.45□□□□□ -0.58
HSPG2-211ENST00000486901 RHOP08100 348 aa11.45□□□□□ -0.58
HSPG2-211ENST00000486901 F8A1P23610 371 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms