RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 ALDH3B2P48448 385 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 HNRNPA3P51991 378 aaKnown RBP2.84□□□□□ -1.95
SMC4-215ENST00000484799 EFNB2P52799 333 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 VLDLRP98155 873 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 PAX2Q02962 417 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 KLRC3Q07444 240 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 ZNF154Q13106 437 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 ELAVL3Q14576 367 aaKnown RBP2.84□□□□□ -1.95
SMC4-215ENST00000484799 KCNJ11Q14654 390 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 LAGE3Q14657 143 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 SLC15A2Q16348 729 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 SLC5A12Q1EHB4 618 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 KCTD21Q4G0X4 260 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 SFT2D3Q587I9 215 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 C9orf129Q5T035 196 aaKnown RBP2.84□□□□□ -1.95
SMC4-215ENST00000484799 KRTAP5-5Q701N2 237 aaPredicted RBP2.84□□□□□ -1.95
SMC4-215ENST00000484799 UTS2BQ765I0 119 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 CTAGE6Q86UF2 777 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 SERPINA9Q86WD7 417 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 TMEM123Q8N131 208 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 UBE2J2Q8N2K1 259 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 ZNF671Q8TAW3 534 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 M1APQ8TC57 530 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 RNF139Q8WU17 664 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 MAIP1Q8WWC4 291 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 MRPS31Q92665 395 aaKnown RBP2.84□□□□□ -1.95
SMC4-215ENST00000484799 FAF2Q96CS3 445 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 PIWIL1Q96J94 861 aaKnown RBP2.84□□□□□ -1.95
SMC4-215ENST00000484799 CITED1Q99966 193 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 ANP32EQ9BTT0 268 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 ZNF385DQ9H6B1 395 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 MCCC2Q9HCC0 563 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 MYOZ2Q9NPC6 264 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 NANSQ9NR45 359 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 PLSCR3Q9NRY6 295 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 WRAP73Q9P2S5 460 aaPredicted RBP2.84□□□□□ -1.95
SMC4-215ENST00000484799 SEC14L3Q9UDX4 400 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 CA5BQ9Y2D0 317 aa2.84□□□□□ -1.95
SMC4-215ENST00000484799 TDRD6O60522 2096 aaKnown RBP2.84□□□□□ -1.95
SMC4-215ENST00000484799 IGKV6-21A0A0C4DH24 114 aa2.83□□□□□ -1.96
SMC4-215ENST00000484799 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.83□□□□□ -1.96
SMC4-215ENST00000484799 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.83□□□□□ -1.96
SMC4-215ENST00000484799 FAM47DPA6NHR8 397 aa2.83□□□□□ -1.96
SMC4-215ENST00000484799 SNTNA6NMZ2 147 aa2.83□□□□□ -1.96
SMC4-215ENST00000484799 GOLGA8SH3BPF8 625 aa2.83□□□□□ -1.96
SMC4-215ENST00000484799 SGK1O00141 431 aa2.83□□□□□ -1.96
SMC4-215ENST00000484799 RS1O15537 224 aa2.83□□□□□ -1.96
SMC4-215ENST00000484799 WBP4O75554 376 aaKnown RBP2.83□□□□□ -1.96
SMC4-215ENST00000484799 TSPAN12O95859 305 aa2.83□□□□□ -1.96
SMC4-215ENST00000484799 PGK1P00558 417 aa2.83□□□□□ -1.96
SMC4-215ENST00000484799 CCDC130P13994 396 aa2.83□□□□□ -1.96
SMC4-215ENST00000484799 CD80P33681 288 aa2.83□□□□□ -1.96
SMC4-215ENST00000484799 NF2P35240 595 aa2.83□□□□□ -1.96
SMC4-215ENST00000484799 TAGLN2P37802 199 aaKnown RBP2.83□□□□□ -1.96
SMC4-215ENST00000484799 RPL13AP40429 203 aaKnown RBP2.83□□□□□ -1.96
SMC4-215ENST00000484799 KRTAP10-1P60331 282 aa2.83□□□□□ -1.96
SMC4-215ENST00000484799 SLC10A1Q14973 349 aa2.83□□□□□ -1.96
SMC4-215ENST00000484799 IMMTQ16891 758 aaKnown RBP2.83□□□□□ -1.96
SMC4-215ENST00000484799 ZNF57Q68EA5 555 aaPredicted RBP2.83□□□□□ -1.96
SMC4-215ENST00000484799 OR4F3Q6IEY1 312 aa2.83□□□□□ -1.96
SMC4-215ENST00000484799 ZNF530Q6P9A1 599 aaPredicted RBP2.83□□□□□ -1.96
SMC4-215ENST00000484799 KCNIP4Q6PIL6 250 aa2.83□□□□□ -1.96
SMC4-215ENST00000484799 METAP1DQ6UB28 335 aaPredicted RBP2.83□□□□□ -1.96
SMC4-215ENST00000484799 TPRA1Q86W33 373 aa2.83□□□□□ -1.96
SMC4-215ENST00000484799 APOBEC3FQ8IUX4 373 aaKnown RBP2.83□□□□□ -1.96
SMC4-215ENST00000484799 FBXO16Q8IX29 292 aaPredicted RBP2.83□□□□□ -1.96
SMC4-215ENST00000484799 MTURNQ8N3F0 131 aa2.83□□□□□ -1.96
SMC4-215ENST00000484799 RNF175Q8N4F7 328 aa2.83□□□□□ -1.96
SMC4-215ENST00000484799 CSNK1A1LQ8N752 337 aa2.83□□□□□ -1.96
SMC4-215ENST00000484799 OR52K2Q8NGK3 314 aa2.83□□□□□ -1.96
SMC4-215ENST00000484799 OR9A4Q8NGU2 314 aa2.83□□□□□ -1.96
SMC4-215ENST00000484799 TRUB1Q8WWH5 349 aaKnown RBP2.83□□□□□ -1.96
SMC4-215ENST00000484799 SLC35A5Q9BS91 424 aa2.83□□□□□ -1.96
SMC4-215ENST00000484799 ELOVL4Q9GZR5 314 aa2.83□□□□□ -1.96
SMC4-215ENST00000484799 NAT10Q9H0A0 1025 aaKnown RBP2.83□□□□□ -1.96
SMC4-215ENST00000484799 MAGT1Q9H0U3 335 aa2.83□□□□□ -1.96
SMC4-215ENST00000484799 GLT8D2Q9H1C3 349 aa2.83□□□□□ -1.96
SMC4-215ENST00000484799 FANCFQ9NPI8 374 aa2.83□□□□□ -1.96
SMC4-215ENST00000484799 SLC17A5Q9NRA2 495 aa2.83□□□□□ -1.96
SMC4-215ENST00000484799 ETNK2Q9NVF9 386 aa2.83□□□□□ -1.96
SMC4-215ENST00000484799 DPM3Q9P2X0 92 aa2.83□□□□□ -1.96
SMC4-215ENST00000484799 ADAM28Q9UKQ2 775 aa2.83□□□□□ -1.96
SMC4-215ENST00000484799 SCML2Q9UQR0 700 aa2.83□□□□□ -1.96
SMC4-215ENST00000484799 POLDIP2Q9Y2S7 368 aa2.83□□□□□ -1.96
SMC4-215ENST00000484799 L3MBTL1Q9Y468 752 aa2.83□□□□□ -1.96
SMC4-215ENST00000484799 NPTNQ9Y639 398 aa2.83□□□□□ -1.96
SMC4-215ENST00000484799 RPAP1Q9BWH6 1393 aaPredicted RBP2.83□□□□□ -1.96
SMC4-215ENST00000484799 LRP5LA4QPB2 252 aa2.82□□□□□ -1.96
SMC4-215ENST00000484799 SAGE2PA6NJ88 616 aa2.82□□□□□ -1.96
SMC4-215ENST00000484799 OR52A4PA6NMU1 304 aa2.82□□□□□ -1.96
SMC4-215ENST00000484799 PP2D1A8MPX8 630 aa2.82□□□□□ -1.96
SMC4-215ENST00000484799 E7ESA3 106 aa2.82□□□□□ -1.96
SMC4-215ENST00000484799 E9PLD3 99 aa2.82□□□□□ -1.96
SMC4-215ENST00000484799 G3V4G9 280 aa2.82□□□□□ -1.96
SMC4-215ENST00000484799 POLR2DO15514 142 aaKnown RBP2.82□□□□□ -1.96
SMC4-215ENST00000484799 EFNA2O43921 213 aa2.82□□□□□ -1.96
SMC4-215ENST00000484799 CABYRO75952 493 aa2.82□□□□□ -1.96
SMC4-215ENST00000484799 CLDN9O95484 217 aa2.82□□□□□ -1.96
SMC4-215ENST00000484799 ALPIP09923 528 aa2.82□□□□□ -1.96
SMC4-215ENST00000484799 TOP1P11387 765 aaKnown RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms