RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 OR4C5Q8NGB2 326 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 TSEN15Q8WW01 171 aaKnown RBP3.59□□□□□ -1.83
VPS13A-211ENST00000484581 FAF2Q96CS3 445 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 NUS1Q96E22 293 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 POM121L2Q96KW2 1035 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 C12orf42Q96LP6 360 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 C11orf70Q9BRQ4 267 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 PNNQ9H307 717 aaKnown RBP3.59□□□□□ -1.83
VPS13A-211ENST00000484581 TMEM185BQ9H7F4 350 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 NHEJ1Q9H9Q4 299 aaPredicted RBP3.59□□□□□ -1.83
VPS13A-211ENST00000484581 NMRAL1Q9HBL8 299 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 NANSQ9NR45 359 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 IMPAD1Q9NX62 359 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 BFARQ9NZS9 450 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 PRODH2Q9UF12 536 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 SLC7A8Q9UHI5 535 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 MUTYHQ9UIF7 546 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 PHF11Q9UIL8 331 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 CHTOPQ9Y3Y2 248 aaKnown RBP3.59□□□□□ -1.83
VPS13A-211ENST00000484581 TDRD15B5MCY1 1934 aaKnown RBP3.59□□□□□ -1.83
VPS13A-211ENST00000484581 FRMPD3Q5JV73 1810 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 A0A1W2PPV9 198 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 PRR23AA6NEV1 266 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 FAM220BPB1ANY3 271 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 C9JVG2 144 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 G3V3Y1 287 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 CDH16O75309 829 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 GAPDHP04406 335 aaKnown RBP3.58□□□□□ -1.84
VPS13A-211ENST00000484581 COX5AP20674 150 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 PTBP1P26599 531 aaKnown RBP eCLIP3.58□□□□□ -1.84
VPS13A-211ENST00000484581 CD1CP29017 333 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 LEPP41159 167 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 HLCSP50747 726 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 HNRNPA3P51991 378 aaKnown RBP3.58□□□□□ -1.84
VPS13A-211ENST00000484581 RPS15P62841 145 aaKnown RBP3.58□□□□□ -1.84
VPS13A-211ENST00000484581 CYLC2Q14093 348 aaPredicted RBP3.58□□□□□ -1.84
VPS13A-211ENST00000484581 SLC10A1Q14973 349 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 LTB4RQ15722 352 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 MICBQ29980 383 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 TRIM16LQ309B1 348 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 KRTAP24-1Q3LI83 254 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 REG3GQ6UW15 175 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 ANGPTL8Q6UXH0 198 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 CENPQQ7L2Z9 268 aaPredicted RBP3.58□□□□□ -1.84
VPS13A-211ENST00000484581 SLC22A18ASQ8N1D0 253 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 MTURNQ8N3F0 131 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 FAM184AQ8NB25 1140 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 SDR9C7Q8NEX9 313 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 OR4Q3Q8NH05 313 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 TFB1MQ8WVM0 346 aaKnown RBP3.58□□□□□ -1.84
VPS13A-211ENST00000484581 ELMO1Q92556 727 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 ZNF75CPQ92670 426 aaPredicted RBP3.58□□□□□ -1.84
VPS13A-211ENST00000484581 SLC38A4Q969I6 547 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 TOMM40LQ969M1 308 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 CXorf40BQ96DE9 158 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 SERAC1Q96JX3 654 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 IFT74Q96LB3 600 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 CCT8L2Q96SF2 557 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 CYP2S1Q96SQ9 504 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 MCHR1Q99705 422 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 CENPKQ9BS16 269 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 SYT11Q9BT88 431 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 DPH7Q9BTV6 452 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 ILKAPQ9H0C8 392 aaPredicted RBP3.58□□□□□ -1.84
VPS13A-211ENST00000484581 GLT8D2Q9H1C3 349 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 ZNF160Q9HCG1 818 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 PAK1IP1Q9NWT1 392 aaPredicted RBP3.58□□□□□ -1.84
VPS13A-211ENST00000484581 PSMC3IPQ9P2W1 217 aaPredicted RBP3.58□□□□□ -1.84
VPS13A-211ENST00000484581 WARS2Q9UGM6 360 aaKnown RBP3.58□□□□□ -1.84
VPS13A-211ENST00000484581 RIMS3Q9UJD0 308 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 COPS3Q9UNS2 423 aa3.58□□□□□ -1.84
VPS13A-211ENST00000484581 CSDC2Q9Y534 153 aaKnown RBP3.58□□□□□ -1.84
VPS13A-211ENST00000484581 LOC100131303A0A0U1RQF7 123 aa3.57□□□□□ -1.84
VPS13A-211ENST00000484581 CCDC182A6NF36 153 aa3.57□□□□□ -1.84
VPS13A-211ENST00000484581 E7ESA3 106 aa3.57□□□□□ -1.84
VPS13A-211ENST00000484581 E9PLD3 99 aa3.57□□□□□ -1.84
VPS13A-211ENST00000484581 OR10H3O60404 316 aa3.57□□□□□ -1.84
VPS13A-211ENST00000484581 PFKFB2O60825 505 aa3.57□□□□□ -1.84
VPS13A-211ENST00000484581 TMEM50AO95807 157 aa3.57□□□□□ -1.84
VPS13A-211ENST00000484581 LGALS2P05162 132 aa3.57□□□□□ -1.84
VPS13A-211ENST00000484581 RNH1P13489 461 aaKnown RBP3.57□□□□□ -1.84
VPS13A-211ENST00000484581 POLR2EP19388 210 aaKnown RBP3.57□□□□□ -1.84
VPS13A-211ENST00000484581 FDFT1P37268 417 aa3.57□□□□□ -1.84
VPS13A-211ENST00000484581 ELK3P41970 407 aa3.57□□□□□ -1.84
VPS13A-211ENST00000484581 STARP49675 285 aa3.57□□□□□ -1.84
VPS13A-211ENST00000484581 CDH6P55285 790 aa3.57□□□□□ -1.84
VPS13A-211ENST00000484581 FCHO2Q0JRZ9 810 aa3.57□□□□□ -1.84
VPS13A-211ENST00000484581 ELAVL2Q12926 359 aaKnown RBP3.57□□□□□ -1.84
VPS13A-211ENST00000484581 CRMP1Q14194 572 aa3.57□□□□□ -1.84
VPS13A-211ENST00000484581 ZNF77Q15935 545 aa3.57□□□□□ -1.84
VPS13A-211ENST00000484581 MRGPRG-AS1Q2M3A8 158 aa3.57□□□□□ -1.84
VPS13A-211ENST00000484581 DMRTC1Q5HYR2 192 aa3.57□□□□□ -1.84
VPS13A-211ENST00000484581 UFSP1Q6NVU6 142 aa3.57□□□□□ -1.84
VPS13A-211ENST00000484581 CLEC2AQ6UVW9 174 aa3.57□□□□□ -1.84
VPS13A-211ENST00000484581 TMCO2Q7Z6W1 182 aaPredicted RBP3.57□□□□□ -1.84
VPS13A-211ENST00000484581 C9orf40Q8IXQ3 194 aa3.57□□□□□ -1.84
VPS13A-211ENST00000484581 MCOLN2Q8IZK6 566 aa3.57□□□□□ -1.84
VPS13A-211ENST00000484581 OFCC1Q8IZS5 231 aa3.57□□□□□ -1.84
VPS13A-211ENST00000484581 GTPBP8Q8N3Z3 284 aaPredicted RBP3.57□□□□□ -1.84
VPS13A-211ENST00000484581 COMMD1Q8N668 190 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms