RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 FKBP2P26885 142 aaKnown RBP16.12■□□□□ 0.17
HDAC6-225ENST00000483506 RYKP34925 604 aa16.12■□□□□ 0.17
HDAC6-225ENST00000483506 HTR3AP46098 478 aa16.12■□□□□ 0.17
HDAC6-225ENST00000483506 PCYT1AP49585 367 aa16.12■□□□□ 0.17
HDAC6-225ENST00000483506 AGFG1P52594 562 aaKnown RBP16.12■□□□□ 0.17
HDAC6-225ENST00000483506 CARD18P57730 90 aa16.12■□□□□ 0.17
HDAC6-225ENST00000483506 CDK6Q00534 326 aa16.12■□□□□ 0.17
HDAC6-225ENST00000483506 MERTKQ12866 999 aa16.12■□□□□ 0.17
HDAC6-225ENST00000483506 SF3A3Q12874 501 aaKnown RBP eCLIP16.12■□□□□ 0.175e-7■■■□□ 17.5
HDAC6-225ENST00000483506 ZNF239Q16600 458 aaKnown RBP16.12■□□□□ 0.17
HDAC6-225ENST00000483506 NET1Q7Z628 596 aaPredicted RBP16.12■□□□□ 0.17
HDAC6-225ENST00000483506 MCEMP1Q8IX19 187 aa16.12■□□□□ 0.17
HDAC6-225ENST00000483506 NFKBIDQ8NI38 313 aa16.12■□□□□ 0.17
HDAC6-225ENST00000483506 OSTF1Q92882 214 aa16.12■□□□□ 0.17
HDAC6-225ENST00000483506 STARD4Q96DR4 205 aa16.12■□□□□ 0.17
HDAC6-225ENST00000483506 GMPPAQ96IJ6 420 aaPredicted RBP16.12■□□□□ 0.17
HDAC6-225ENST00000483506 SRXN1Q9BYN0 137 aa16.12■□□□□ 0.17
HDAC6-225ENST00000483506 ARMC7Q9H6L4 198 aa16.12■□□□□ 0.17
HDAC6-225ENST00000483506 SERINC1Q9NRX5 453 aa16.12■□□□□ 0.17
HDAC6-225ENST00000483506 GLRX2Q9NS18 164 aa16.12■□□□□ 0.17
HDAC6-225ENST00000483506 RLIMQ9NVW2 624 aa16.12■□□□□ 0.17
HDAC6-225ENST00000483506 CHRNA9Q9UGM1 479 aa16.12■□□□□ 0.17
HDAC6-225ENST00000483506 ZNF232Q9UNY5 417 aa16.12■□□□□ 0.17
HDAC6-225ENST00000483506 EEF1E1-BLOC1S5C9J1V9 151 aa16.11■□□□□ 0.17
HDAC6-225ENST00000483506 FXYD1O00168 92 aa16.11■□□□□ 0.17
HDAC6-225ENST00000483506 MSTNO14793 375 aa16.11■□□□□ 0.17
HDAC6-225ENST00000483506 EEF1E1O43324 174 aaKnown RBP16.11■□□□□ 0.17
HDAC6-225ENST00000483506 SS18L1O75177 396 aaPredicted RBP16.11■□□□□ 0.17
HDAC6-225ENST00000483506 SYNGR4O95473 234 aa16.11■□□□□ 0.17
HDAC6-225ENST00000483506 CGAP01215 116 aa16.11■□□□□ 0.17
HDAC6-225ENST00000483506 PRKAR1BP31321 381 aa16.11■□□□□ 0.17
HDAC6-225ENST00000483506 ACAA2P42765 397 aaKnown RBP16.11■□□□□ 0.17
HDAC6-225ENST00000483506 SLC1A3P43003 542 aa16.11■□□□□ 0.17
HDAC6-225ENST00000483506 IDH2P48735 452 aaKnown RBP16.11■□□□□ 0.17
HDAC6-225ENST00000483506 MAP2K6P52564 334 aa16.11■□□□□ 0.17
HDAC6-225ENST00000483506 RAC3P60763 192 aa16.11■□□□□ 0.17
HDAC6-225ENST00000483506 SORDQ00796 357 aa16.11■□□□□ 0.17
HDAC6-225ENST00000483506 RBBP4Q09028 425 aa16.11■□□□□ 0.17
HDAC6-225ENST00000483506 SCARB2Q14108 478 aa16.11■□□□□ 0.17
HDAC6-225ENST00000483506 SELPLGQ14242 412 aa16.11■□□□□ 0.17
HDAC6-225ENST00000483506 ZNF311Q5JNZ3 666 aa16.11■□□□□ 0.17
HDAC6-225ENST00000483506 VWA1Q6PCB0 445 aa16.11■□□□□ 0.17
HDAC6-225ENST00000483506 FAM214BQ7L5A3 538 aa16.11■□□□□ 0.17
HDAC6-225ENST00000483506 ZNF550Q7Z398 422 aa16.11■□□□□ 0.17
HDAC6-225ENST00000483506 GDF7Q7Z4P5 450 aa16.11■□□□□ 0.17
HDAC6-225ENST00000483506 PTOV1Q86YD1 416 aa16.11■□□□□ 0.17
HDAC6-225ENST00000483506 CLIP4Q8N3C7 705 aa16.11■□□□□ 0.17
HDAC6-225ENST00000483506 RNF128Q8TEB7 428 aa16.11■□□□□ 0.17
HDAC6-225ENST00000483506 RSPO3Q9BXY4 272 aaPredicted RBP16.11■□□□□ 0.17
HDAC6-225ENST00000483506 ADAM19Q9H013 955 aa16.11■□□□□ 0.17
HDAC6-225ENST00000483506 KAT8Q9H7Z6 458 aaKnown RBP16.11■□□□□ 0.17
HDAC6-225ENST00000483506 CACYBPQ9HB71 228 aaKnown RBP16.11■□□□□ 0.17
HDAC6-225ENST00000483506 CTPS2Q9NRF8 586 aa16.11■□□□□ 0.17
HDAC6-225ENST00000483506 KCNN3Q9UGI6 736 aa16.11■□□□□ 0.17
HDAC6-225ENST00000483506 SPIN1Q9Y657 262 aaPredicted RBP16.11■□□□□ 0.17
HDAC6-225ENST00000483506 CAPN7Q9Y6W3 813 aa16.11■□□□□ 0.17
HDAC6-225ENST00000483506 A8MXE2 369 aa16.1■□□□□ 0.17
HDAC6-225ENST00000483506 CD8BP10966 210 aa16.1■□□□□ 0.17
HDAC6-225ENST00000483506 SLC6A2P23975 617 aa16.1■□□□□ 0.17
HDAC6-225ENST00000483506 SLC7A1P30825 629 aa16.1■□□□□ 0.17
HDAC6-225ENST00000483506 CLK1P49759 484 aaKnown RBP16.1■□□□□ 0.17
HDAC6-225ENST00000483506 PCBP3P57721 371 aaKnown RBP16.1■□□□□ 0.17
HDAC6-225ENST00000483506 MTPNP58546 118 aa16.1■□□□□ 0.17
HDAC6-225ENST00000483506 SYT14P1Q58G82 188 aa16.1■□□□□ 0.17
HDAC6-225ENST00000483506 DHRS4L2Q6PKH6 230 aa16.1■□□□□ 0.17
HDAC6-225ENST00000483506 BTLAQ7Z6A9 289 aa16.1■□□□□ 0.17
HDAC6-225ENST00000483506 SERPINA11Q86U17 422 aa16.1■□□□□ 0.17
HDAC6-225ENST00000483506 ADGRG3Q86Y34 549 aa16.1■□□□□ 0.17
HDAC6-225ENST00000483506 HIPK4Q8NE63 616 aa16.1■□□□□ 0.17
HDAC6-225ENST00000483506 PRRG4Q9BZD6 226 aa16.1■□□□□ 0.17
HDAC6-225ENST00000483506 GP6Q9HCN6 339 aa16.1■□□□□ 0.17
HDAC6-225ENST00000483506 LRBAP50851 2863 aa16.1■□□□□ 0.17
HDAC6-225ENST00000483506 ZNF208O43345 1280 aa16.09■□□□□ 0.17
HDAC6-225ENST00000483506 SSTR2P30874 369 aa16.09■□□□□ 0.17
HDAC6-225ENST00000483506 UQCRC1P31930 480 aa16.09■□□□□ 0.17
HDAC6-225ENST00000483506 LSP1P33241 339 aa16.09■□□□□ 0.17
HDAC6-225ENST00000483506 GZMMP51124 257 aa16.09■□□□□ 0.17
HDAC6-225ENST00000483506 POLR2HP52434 150 aaKnown RBP16.09■□□□□ 0.17
HDAC6-225ENST00000483506 CYLC2Q14093 348 aaPredicted RBP16.09■□□□□ 0.17
HDAC6-225ENST00000483506 RNPS1Q15287 305 aaKnown RBP16.09■□□□□ 0.17
HDAC6-225ENST00000483506 REP15Q6BDI9 236 aa16.09■□□□□ 0.17
HDAC6-225ENST00000483506 GTF2IRD2BQ6EKJ0 949 aa16.09■□□□□ 0.17
HDAC6-225ENST00000483506 NANOGP8Q6NSW7 305 aa16.09■□□□□ 0.17
HDAC6-225ENST00000483506 TMPPEQ6ZT21 453 aa16.09■□□□□ 0.17
HDAC6-225ENST00000483506 SPATA21Q7Z572 469 aa16.09■□□□□ 0.17
HDAC6-225ENST00000483506 GTF2IRD2Q86UP8 949 aa16.09■□□□□ 0.17
HDAC6-225ENST00000483506 SNX32Q86XE0 403 aa16.09■□□□□ 0.17
HDAC6-225ENST00000483506 KRT73Q86Y46 540 aa16.09■□□□□ 0.17
HDAC6-225ENST00000483506 KIF18BQ86Y91 864 aa16.09■□□□□ 0.17
HDAC6-225ENST00000483506 CNEP1R1Q8N9A8 125 aa16.09■□□□□ 0.17
HDAC6-225ENST00000483506 C11orf65Q8NCR3 313 aa16.09■□□□□ 0.17
HDAC6-225ENST00000483506 ATP6V1C2Q8NEY4 427 aa16.09■□□□□ 0.17
HDAC6-225ENST00000483506 OR8J3Q8NGG0 315 aa16.09■□□□□ 0.17
HDAC6-225ENST00000483506 OR6K3Q8NGY3 331 aa16.09■□□□□ 0.17
HDAC6-225ENST00000483506 LRRC58Q96CX6 371 aa16.09■□□□□ 0.17
HDAC6-225ENST00000483506 SPATA5L1Q9BVQ7 753 aa16.09■□□□□ 0.17
HDAC6-225ENST00000483506 NANOGQ9H9S0 305 aa16.09■□□□□ 0.17
HDAC6-225ENST00000483506 OSGIN1Q9UJX0 560 aa16.09■□□□□ 0.17
HDAC6-225ENST00000483506 ANGPT4Q9Y264 503 aa16.09■□□□□ 0.17
HDAC6-225ENST00000483506 HDGFL3Q9Y3E1 203 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms