RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 ITGADQ13349 1161 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 LARS2Q15031 903 aaKnown RBP10.2□□□□□ -0.78
CCM2-213ENST00000480658 ETFDHQ16134 617 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 LIN52Q52LA3 116 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 SFRP5Q5T4F7 317 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 PRAMEF8Q5VWM4 474 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 PRAMEF7Q5VXH5 474 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 ZNF621Q6ZSS3 439 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 MTDHQ86UE4 582 aaKnown RBP10.2□□□□□ -0.78
CCM2-213ENST00000480658 RNF130Q86XS8 419 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 TUSC5Q8IXB3 177 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 GABRG1Q8N1C3 465 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 MIER2Q8N344 545 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 TMEM171Q8WVE6 324 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 SLC35B4Q969S0 331 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 GTPBP3Q969Y2 492 aaKnown RBP10.2□□□□□ -0.78
CCM2-213ENST00000480658 TLCD1Q96CP7 247 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 MUCL1Q96DR8 90 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 C7orf26Q96N11 449 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 PSD2Q9BQI7 771 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 LIME1Q9H400 295 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 SERHL2Q9H4I8 314 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 C12orf49Q9H741 205 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 COQ10BQ9H8M1 238 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 UBTD1Q9HAC8 227 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 SDR39U1Q9NRG7 319 aaPredicted RBP10.2□□□□□ -0.78
CCM2-213ENST00000480658 MRGBPQ9NV56 204 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 FAIMQ9NVQ4 179 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 PNPOQ9NVS9 261 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 PARPBPQ9NWS1 579 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 CLEC4AQ9UMR7 237 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 CORO2BQ9UQ03 480 aa10.2□□□□□ -0.78
CCM2-213ENST00000480658 AKAP9Q99996 3911 aa10.19□□□□□ -0.78
CCM2-213ENST00000480658 IGKV3D-15A0A087WSY6 115 aa10.19□□□□□ -0.78
CCM2-213ENST00000480658 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.19□□□□□ -0.78
CCM2-213ENST00000480658 CFAP73A6NFT4 308 aa10.19□□□□□ -0.78
CCM2-213ENST00000480658 POLR3GO15318 223 aaPredicted RBP10.19□□□□□ -0.78
CCM2-213ENST00000480658 VIMP08670 466 aaKnown RBP10.19□□□□□ -0.78
CCM2-213ENST00000480658 ALDOCP09972 364 aaKnown RBP10.19□□□□□ -0.78
CCM2-213ENST00000480658 TFPIP10646 304 aa10.19□□□□□ -0.78
CCM2-213ENST00000480658 PPIBP23284 216 aaKnown RBP10.19□□□□□ -0.78
CCM2-213ENST00000480658 HOXC12P31275 282 aa10.19□□□□□ -0.78
CCM2-213ENST00000480658 SLC1A3P43003 542 aa10.19□□□□□ -0.78
CCM2-213ENST00000480658 OR3A2P47893 321 aa10.19□□□□□ -0.78
CCM2-213ENST00000480658 WDR4P57081 412 aaKnown RBP10.19□□□□□ -0.78
CCM2-213ENST00000480658 UFM1P61960 85 aa10.19□□□□□ -0.78
CCM2-213ENST00000480658 SLC35A1P78382 337 aa10.19□□□□□ -0.78
CCM2-213ENST00000480658 MPP2Q14168 576 aa10.19□□□□□ -0.78
CCM2-213ENST00000480658 KRTAP21-3Q3LHN1 58 aa10.19□□□□□ -0.78
CCM2-213ENST00000480658 AGBL2Q5U5Z8 902 aa10.19□□□□□ -0.78
CCM2-213ENST00000480658 ADAM5Q6NVV9 412 aa10.19□□□□□ -0.78
CCM2-213ENST00000480658 ZNF550Q7Z398 422 aa10.19□□□□□ -0.78
CCM2-213ENST00000480658 ZNF100Q8IYN0 542 aa10.19□□□□□ -0.78
CCM2-213ENST00000480658 ATP6V1C2Q8NEY4 427 aa10.19□□□□□ -0.78
CCM2-213ENST00000480658 MGARPQ8TDB4 240 aa10.19□□□□□ -0.78
CCM2-213ENST00000480658 LRRC8CQ8TDW0 803 aa10.19□□□□□ -0.78
CCM2-213ENST00000480658 ROBO4Q8WZ75 1007 aa10.19□□□□□ -0.78
CCM2-213ENST00000480658 ZC3HAV1LQ96H79 300 aaKnown RBP10.19□□□□□ -0.78
CCM2-213ENST00000480658 C18orf12Q96KH6 178 aa10.19□□□□□ -0.78
CCM2-213ENST00000480658 MARK4Q96L34 752 aa10.19□□□□□ -0.78
CCM2-213ENST00000480658 NAA11Q9BSU3 229 aaPredicted RBP10.19□□□□□ -0.78
CCM2-213ENST00000480658 BDH2Q9BUT1 245 aa10.19□□□□□ -0.78
CCM2-213ENST00000480658 CCDC106Q9BWC9 280 aa10.19□□□□□ -0.78
CCM2-213ENST00000480658 SRXN1Q9BYN0 137 aa10.19□□□□□ -0.78
CCM2-213ENST00000480658 GSX2Q9BZM3 304 aa10.19□□□□□ -0.78
CCM2-213ENST00000480658 PIF1Q9H611 641 aa10.19□□□□□ -0.78
CCM2-213ENST00000480658 TMBIM4Q9HC24 238 aa10.19□□□□□ -0.78
CCM2-213ENST00000480658 MOV10Q9HCE1 1003 aaKnown RBP10.19□□□□□ -0.78
CCM2-213ENST00000480658 ARGLU1Q9NWB6 273 aaPredicted RBP10.19□□□□□ -0.78
CCM2-213ENST00000480658 ZNF232Q9UNY5 417 aa10.19□□□□□ -0.78
CCM2-213ENST00000480658 IFT52Q9Y366 437 aa10.19□□□□□ -0.78
CCM2-213ENST00000480658 F8P00451 2351 aa10.19□□□□□ -0.78
CCM2-213ENST00000480658 MED12LQ86YW9 2145 aa10.18□□□□□ -0.78
CCM2-213ENST00000480658 SMAD9O15198 467 aaKnown RBP10.18□□□□□ -0.78
CCM2-213ENST00000480658 GCM2O75603 506 aaPredicted RBP10.18□□□□□ -0.78
CCM2-213ENST00000480658 OPN1LWP04000 364 aa10.18□□□□□ -0.78
CCM2-213ENST00000480658 THBS1P07996 1170 aa10.18□□□□□ -0.78
CCM2-213ENST00000480658 KITP10721 976 aa10.18□□□□□ -0.78
CCM2-213ENST00000480658 PAX1P15863 534 aa10.18□□□□□ -0.78
CCM2-213ENST00000480658 MRPL19P49406 292 aaKnown RBP10.18□□□□□ -0.78
CCM2-213ENST00000480658 POLR2JP52435 117 aaKnown RBP10.18□□□□□ -0.78
CCM2-213ENST00000480658 SLC16A1P53985 500 aa10.18□□□□□ -0.78
CCM2-213ENST00000480658 PHC1P78364 1004 aa10.18□□□□□ -0.78
CCM2-213ENST00000480658 TGFBR3Q03167 851 aa10.18□□□□□ -0.78
CCM2-213ENST00000480658 FOXD4Q12950 439 aaPredicted RBP10.18□□□□□ -0.78
CCM2-213ENST00000480658 TOMM34Q15785 309 aaPredicted RBP10.18□□□□□ -0.78
CCM2-213ENST00000480658 TIMM23BQ5SRD1 257 aa10.18□□□□□ -0.78
CCM2-213ENST00000480658 BEND6Q5SZJ8 279 aaPredicted RBP10.18□□□□□ -0.78
CCM2-213ENST00000480658 RNF220Q5VTB9 566 aa10.18□□□□□ -0.78
CCM2-213ENST00000480658 ABLIM2Q6H8Q1 611 aa10.18□□□□□ -0.78
CCM2-213ENST00000480658 OR7E24Q6IFN5 339 aa10.18□□□□□ -0.78
CCM2-213ENST00000480658 ZNF704Q6ZNC4 412 aaPredicted RBP10.18□□□□□ -0.78
CCM2-213ENST00000480658 ABHD12BQ7Z5M8 362 aaPredicted RBP10.18□□□□□ -0.78
CCM2-213ENST00000480658 CXorf67Q86X51 503 aaPredicted RBP10.18□□□□□ -0.78
CCM2-213ENST00000480658 ZNF611Q8N823 705 aa10.18□□□□□ -0.78
CCM2-213ENST00000480658 DYDC1Q8WWB3 177 aa10.18□□□□□ -0.78
CCM2-213ENST00000480658 RAB8BQ92930 207 aa10.18□□□□□ -0.78
CCM2-213ENST00000480658 APH1AQ96BI3 265 aa10.18□□□□□ -0.78
CCM2-213ENST00000480658 S100PBPQ96BU1 408 aa10.18□□□□□ -0.78
CCM2-213ENST00000480658 SIKE1Q9BRV8 207 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms