RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 TMEM239Q8WW34 195 aa8.96□□□□□ -0.97
VEGFA-212ENST00000480614 MCOLN1Q9GZU1 580 aa8.96□□□□□ -0.97
VEGFA-212ENST00000480614 DYNLRB1Q9NP97 96 aa8.96□□□□□ -0.97
VEGFA-212ENST00000480614 NLKQ9UBE8 527 aa8.96□□□□□ -0.97
VEGFA-212ENST00000480614 GIMAP2Q9UG22 337 aa8.96□□□□□ -0.97
VEGFA-212ENST00000480614 AGAP14A8MT82 685 aa8.96□□□□□ -0.97
VEGFA-212ENST00000480614 SPDEFO95238 335 aa8.96□□□□□ -0.97
VEGFA-212ENST00000480614 GABRR1P24046 479 aa8.96□□□□□ -0.97
VEGFA-212ENST00000480614 ECI1P42126 302 aa8.96□□□□□ -0.97
VEGFA-212ENST00000480614 EMP2P54851 167 aa8.96□□□□□ -0.97
VEGFA-212ENST00000480614 RAB33AQ14088 237 aa8.96□□□□□ -0.97
VEGFA-212ENST00000480614 IDO2Q6ZQW0 420 aa8.96□□□□□ -0.97
VEGFA-212ENST00000480614 MISPQ8IVT2 679 aa8.96□□□□□ -0.97
VEGFA-212ENST00000480614 OR4D6Q8NGJ1 314 aa8.96□□□□□ -0.97
VEGFA-212ENST00000480614 GON7Q9BXV9 100 aa8.96□□□□□ -0.97
VEGFA-212ENST00000480614 AK6Q9Y3D8 172 aaKnown RBP8.96□□□□□ -0.97
VEGFA-212ENST00000480614 PLEKHM1Q9Y4G2 1056 aa8.96□□□□□ -0.97
VEGFA-212ENST00000480614 FGFBP1Q14512 234 aa8.96□□□□□ -0.97
VEGFA-212ENST00000480614 Q6ZSR6 202 aa8.96□□□□□ -0.97
VEGFA-212ENST00000480614 SLC43A2Q8N370 569 aa8.96□□□□□ -0.97
VEGFA-212ENST00000480614 IL17RDQ8NFM7 739 aa8.96□□□□□ -0.97
VEGFA-212ENST00000480614 ZNF75AQ96N20 296 aa8.96□□□□□ -0.97
VEGFA-212ENST00000480614 HEMK1Q9Y5R4 338 aaPredicted RBP8.96□□□□□ -0.97
VEGFA-212ENST00000480614 CEBPZOSA8MTT3 80 aa8.96□□□□□ -0.98
VEGFA-212ENST00000480614 NUDT7P0C024 238 aa8.96□□□□□ -0.98
VEGFA-212ENST00000480614 GKP32189 559 aa8.96□□□□□ -0.98
VEGFA-212ENST00000480614 MED17Q9NVC6 651 aa8.96□□□□□ -0.98
VEGFA-212ENST00000480614 ZDHHC7Q9NXF8 308 aa8.96□□□□□ -0.98
VEGFA-212ENST00000480614 GJB5O95377 273 aa8.96□□□□□ -0.98
VEGFA-212ENST00000480614 METTL15P1P0C7V9 234 aa8.96□□□□□ -0.98
VEGFA-212ENST00000480614 CXCR4P61073 352 aa8.96□□□□□ -0.98
VEGFA-212ENST00000480614 GLB1L2Q8IW92 636 aa8.96□□□□□ -0.98
VEGFA-212ENST00000480614 KLHDC8BQ8IXV7 354 aa8.96□□□□□ -0.98
VEGFA-212ENST00000480614 ZFP41Q8N8Y5 198 aa8.96□□□□□ -0.98
VEGFA-212ENST00000480614 NMNAT2Q9BZQ4 307 aa8.96□□□□□ -0.98
VEGFA-212ENST00000480614 LCKP06239 509 aa8.96□□□□□ -0.98
VEGFA-212ENST00000480614 ZNF648Q5T619 568 aaPredicted RBP8.96□□□□□ -0.98
VEGFA-212ENST00000480614 LRRC56Q8IYG6 542 aaPredicted RBP8.96□□□□□ -0.98
VEGFA-212ENST00000480614 LILRB4Q8NHJ6 448 aa8.96□□□□□ -0.98
VEGFA-212ENST00000480614 FUBP1Q96AE4 644 aaKnown RBP8.96□□□□□ -0.98
VEGFA-212ENST00000480614 FAM71F1Q96KD3 344 aaPredicted RBP8.96□□□□□ -0.98
VEGFA-212ENST00000480614 ZNF395Q9H8N7 513 aaPredicted RBP8.96□□□□□ -0.98
VEGFA-212ENST00000480614 YKT6O15498 198 aa8.96□□□□□ -0.98
VEGFA-212ENST00000480614 HABP2Q14520 560 aaPredicted RBP8.96□□□□□ -0.98
VEGFA-212ENST00000480614 C2orf76Q3KRA6 126 aa8.96□□□□□ -0.98
VEGFA-212ENST00000480614 ACOT11Q8WXI4 607 aaPredicted RBP8.96□□□□□ -0.98
VEGFA-212ENST00000480614 RSPRY1Q96DX4 576 aa8.96□□□□□ -0.98
VEGFA-212ENST00000480614 THAP7Q9BT49 309 aaPredicted RBP8.96□□□□□ -0.98
VEGFA-212ENST00000480614 MKRN2Q9H000 416 aaKnown RBP8.96□□□□□ -0.98
VEGFA-212ENST00000480614 IL2RGP31785 369 aa8.96□□□□□ -0.98
VEGFA-212ENST00000480614 EIF2DP41214 584 aaKnown RBP8.96□□□□□ -0.98
VEGFA-212ENST00000480614 RUNX3Q13761 415 aa8.96□□□□□ -0.98
VEGFA-212ENST00000480614 EXOSC6Q5RKV6 272 aaKnown RBP8.96□□□□□ -0.98
VEGFA-212ENST00000480614 ZNF551Q7Z340 670 aaPredicted RBP8.96□□□□□ -0.98
VEGFA-212ENST00000480614 ZNF679Q8IYX0 411 aa8.96□□□□□ -0.98
VEGFA-212ENST00000480614 AGPAT4Q9NRZ5 378 aa8.96□□□□□ -0.98
VEGFA-212ENST00000480614 SIDT1Q9NXL6 827 aaKnown RBP8.96□□□□□ -0.98
VEGFA-212ENST00000480614 MRPL15Q9P015 296 aaKnown RBP8.96□□□□□ -0.98
VEGFA-212ENST00000480614 SLX4Q8IY92 1834 aa8.96□□□□□ -0.98
VEGFA-212ENST00000480614 SULT1B1O43704 296 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 XCR1P46094 333 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 ARPC1BO15143 372 aaKnown RBP8.95□□□□□ -0.98
VEGFA-212ENST00000480614 OIP5O43482 229 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 TRIM23P36406 574 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 ISCA2Q86U28 154 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 CPEB1Q9BZB8 566 aaKnown RBP8.95□□□□□ -0.98
VEGFA-212ENST00000480614 OBP2BQ9NPH6 170 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 C1orf123Q9NWV4 160 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 ZNF281Q9Y2X9 895 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 SLC22A23A1A5C7 686 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 GPR32O75388 356 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 FGF4P08620 206 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 SLC35A1P78382 337 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 RGNQ15493 299 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 TMEM185AQ8NFB2 350 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 ABHD11Q8NFV4 315 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 UQCC2Q9BRT2 126 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 TOGARAM1Q9Y4F4 1720 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 K7EQM0 130 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 WDR5P61964 334 aaKnown RBP8.95□□□□□ -0.98
VEGFA-212ENST00000480614 FAM199XQ6PEV8 388 aaPredicted RBP8.95□□□□□ -0.98
VEGFA-212ENST00000480614 OR7G3Q8NG95 312 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 C3orf49Q96BT1 292 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 NUDT9Q9BW91 350 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 SERTAD4Q9NUC0 356 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 GPR52Q9Y2T5 361 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 A0A0U1RQK1 487 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 IDUAP35475 653 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 SOX3P41225 446 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 ETV1P50549 477 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 RPS27LQ71UM5 84 aaKnown RBP8.95□□□□□ -0.98
VEGFA-212ENST00000480614 TCEAL8Q8IYN2 117 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 CORO2AQ92828 525 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 NMNAT1Q9HAN9 279 aaPredicted RBP8.95□□□□□ -0.98
VEGFA-212ENST00000480614 SMCO4Q9NRQ5 59 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 SURF4O15260 269 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 CT45A6P0DMU7 189 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 CT45A5P0DMU8 189 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 CT45A7P0DMV0 189 aa8.95□□□□□ -0.98
VEGFA-212ENST00000480614 CT45A8P0DMV1 189 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms