RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 DIO1P49895 249 aa13.67□□□□□ -0.22
CDK9-203ENST00000480353 CRISP3P54108 245 aa13.67□□□□□ -0.22
CDK9-203ENST00000480353 FUT5Q11128 374 aa13.67□□□□□ -0.22
CDK9-203ENST00000480353 BEX5Q5H9J7 111 aa13.67□□□□□ -0.22
CDK9-203ENST00000480353 COX20Q5RI15 118 aa13.67□□□□□ -0.22
CDK9-203ENST00000480353 STAC2Q6ZMT1 411 aa13.67□□□□□ -0.22
CDK9-203ENST00000480353 MSANTD1Q6ZTZ1 278 aa13.67□□□□□ -0.22
CDK9-203ENST00000480353 HDXQ7Z353 690 aa13.67□□□□□ -0.22
CDK9-203ENST00000480353 PMM1Q92871 262 aa13.67□□□□□ -0.22
CDK9-203ENST00000480353 DDIT4LQ96D03 193 aa13.67□□□□□ -0.22
CDK9-203ENST00000480353 MBD6Q96DN6 1003 aa13.67□□□□□ -0.22
CDK9-203ENST00000480353 C7orf26Q96N11 449 aa13.67□□□□□ -0.22
CDK9-203ENST00000480353 OR52B2Q96RD2 323 aa13.67□□□□□ -0.22
CDK9-203ENST00000480353 HDHD5Q9BXW7 423 aa13.67□□□□□ -0.22
CDK9-203ENST00000480353 RAD21L1Q9H4I0 556 aa13.67□□□□□ -0.22
CDK9-203ENST00000480353 ARMC7Q9H6L4 198 aa13.67□□□□□ -0.22
CDK9-203ENST00000480353 TCF7L2Q9NQB0 619 aa13.67□□□□□ -0.22
CDK9-203ENST00000480353 CTPS2Q9NRF8 586 aa13.67□□□□□ -0.22
CDK9-203ENST00000480353 SDR39U1Q9NRG7 319 aaPredicted RBP13.67□□□□□ -0.22
CDK9-203ENST00000480353 THUMPD1Q9NXG2 353 aaKnown RBP13.67□□□□□ -0.22
CDK9-203ENST00000480353 EMC3Q9P0I2 261 aa13.67□□□□□ -0.22
CDK9-203ENST00000480353 CHRNA9Q9UGM1 479 aa13.67□□□□□ -0.22
CDK9-203ENST00000480353 ABCA4P78363 2273 aa13.67□□□□□ -0.22
CDK9-203ENST00000480353 FAM234BA2RU67 622 aa13.66□□□□□ -0.22
CDK9-203ENST00000480353 AGAP5A6NIR3 686 aa13.66□□□□□ -0.22
CDK9-203ENST00000480353 CLDN24A6NM45 220 aa13.66□□□□□ -0.22
CDK9-203ENST00000480353 ETV2O00321 342 aaPredicted RBP13.66□□□□□ -0.22
CDK9-203ENST00000480353 TGDSO95455 350 aa13.66□□□□□ -0.22
CDK9-203ENST00000480353 BCHEP06276 602 aa13.66□□□□□ -0.22
CDK9-203ENST00000480353 FESP07332 822 aa13.66□□□□□ -0.22
CDK9-203ENST00000480353 CHRM4P08173 479 aa13.66□□□□□ -0.22
CDK9-203ENST00000480353 NR1H2P55055 460 aa13.66□□□□□ -0.22
CDK9-203ENST00000480353 DSTNP60981 165 aa13.66□□□□□ -0.22
CDK9-203ENST00000480353 CAPRIN1Q14444 709 aaKnown RBP13.66□□□□□ -0.22
CDK9-203ENST00000480353 LIN52Q52LA3 116 aa13.66□□□□□ -0.22
CDK9-203ENST00000480353 EPGNQ6UW88 154 aa13.66□□□□□ -0.22
CDK9-203ENST00000480353 TFAP2EQ6VUC0 442 aa13.66□□□□□ -0.22
CDK9-203ENST00000480353 TMPPEQ6ZT21 453 aa13.66□□□□□ -0.22
CDK9-203ENST00000480353 NUFIP2Q7Z417 695 aaKnown RBP13.66□□□□□ -0.22
CDK9-203ENST00000480353 MAVSQ7Z434 540 aa13.66□□□□□ -0.22
CDK9-203ENST00000480353 CXorf67Q86X51 503 aaPredicted RBP13.66□□□□□ -0.22
CDK9-203ENST00000480353 TGIF2LYQ8IUE0 185 aa13.66□□□□□ -0.22
CDK9-203ENST00000480353 ZNF440Q8IYI8 595 aa13.66□□□□□ -0.22
CDK9-203ENST00000480353 ZNF100Q8IYN0 542 aa13.66□□□□□ -0.22
CDK9-203ENST00000480353 FAM71CQ8NEG0 241 aa13.66□□□□□ -0.22
CDK9-203ENST00000480353 PIGTQ969N2 578 aa13.66□□□□□ -0.22
CDK9-203ENST00000480353 VPS33AQ96AX1 596 aa13.66□□□□□ -0.22
CDK9-203ENST00000480353 ZG16BQ96DA0 208 aa13.66□□□□□ -0.22
CDK9-203ENST00000480353 CCL19Q99731 98 aa13.66□□□□□ -0.22
CDK9-203ENST00000480353 OR10A4Q9H209 315 aa13.66□□□□□ -0.22
CDK9-203ENST00000480353 CXXC4Q9H2H0 198 aa13.66□□□□□ -0.22
CDK9-203ENST00000480353 SLC38A1Q9H2H9 487 aa13.66□□□□□ -0.22
CDK9-203ENST00000480353 TPT1P8Q9HAU6 139 aa13.66□□□□□ -0.22
CDK9-203ENST00000480353 NGBQ9NPG2 151 aa13.66□□□□□ -0.22
CDK9-203ENST00000480353 BEX4Q9NWD9 120 aaPredicted RBP13.66□□□□□ -0.22
CDK9-203ENST00000480353 ZNF232Q9UNY5 417 aa13.66□□□□□ -0.22
CDK9-203ENST00000480353 CFAP73A6NFT4 308 aa13.65□□□□□ -0.22
CDK9-203ENST00000480353 DEFB108AA8MXU0 73 aa13.65□□□□□ -0.22
CDK9-203ENST00000480353 C5orf58C9J3I9 102 aa13.65□□□□□ -0.22
CDK9-203ENST00000480353 CYTIPO60759 359 aa13.65□□□□□ -0.22
CDK9-203ENST00000480353 SMPD2O60906 423 aa13.65□□□□□ -0.22
CDK9-203ENST00000480353 ADAP00813 363 aa13.65□□□□□ -0.22
CDK9-203ENST00000480353 ZCCHC18P0CG32 403 aa13.65□□□□□ -0.22
CDK9-203ENST00000480353 ETFAP13804 333 aa13.65□□□□□ -0.22
CDK9-203ENST00000480353 NID1P14543 1247 aa13.65□□□□□ -0.22
CDK9-203ENST00000480353 POLR2HP52434 150 aaKnown RBP13.65□□□□□ -0.22
CDK9-203ENST00000480353 OR2B6P58173 313 aa13.65□□□□□ -0.22
CDK9-203ENST00000480353 COPZ1P61923 177 aa13.65□□□□□ -0.22
CDK9-203ENST00000480353 LARS2Q15031 903 aaKnown RBP13.65□□□□□ -0.22
CDK9-203ENST00000480353 MRPL2Q5T653 305 aaKnown RBP13.65□□□□□ -0.22
CDK9-203ENST00000480353 GALNT5Q7Z7M9 940 aa13.65□□□□□ -0.22
CDK9-203ENST00000480353 P3H2Q8IVL5 708 aa13.65□□□□□ -0.22
CDK9-203ENST00000480353 UBE2J2Q8N2K1 259 aa13.65□□□□□ -0.22
CDK9-203ENST00000480353 OR9I1Q8NGQ6 314 aa13.65□□□□□ -0.22
CDK9-203ENST00000480353 CNOT9Q92600 299 aaKnown RBP13.65□□□□□ -0.22
CDK9-203ENST00000480353 KISS1RQ969F8 398 aaPredicted RBP13.65□□□□□ -0.22
CDK9-203ENST00000480353 DNAJA3Q96EY1 480 aa13.65□□□□□ -0.22
CDK9-203ENST00000480353 CCDC106Q9BWC9 280 aa13.65□□□□□ -0.22
CDK9-203ENST00000480353 INTS9Q9NV88 658 aaKnown RBP13.65□□□□□ -0.22
CDK9-203ENST00000480353 HDGFL3Q9Y3E1 203 aa13.65□□□□□ -0.22
CDK9-203ENST00000480353 TEP1Q99973 2627 aaKnown RBP13.64□□□□□ -0.23
CDK9-203ENST00000480353 TMED7-TICAM2A0A0A6YYA0 188 aa13.64□□□□□ -0.23
CDK9-203ENST00000480353 PRAMEF27A3QJZ7 478 aa13.64□□□□□ -0.23
CDK9-203ENST00000480353 HMGB1P1B2RPK0 211 aaPredicted RBP13.64□□□□□ -0.23
CDK9-203ENST00000480353 SMAD9O15198 467 aaKnown RBP13.64□□□□□ -0.23
CDK9-203ENST00000480353 ARHGEF9O43307 516 aa13.64□□□□□ -0.23
CDK9-203ENST00000480353 DNAJA2O60884 412 aa13.64□□□□□ -0.23
CDK9-203ENST00000480353 C1QCP02747 245 aa13.64□□□□□ -0.23
CDK9-203ENST00000480353 NCF2P19878 526 aaPredicted RBP13.64□□□□□ -0.23
CDK9-203ENST00000480353 KLK2P20151 261 aa13.64□□□□□ -0.23
CDK9-203ENST00000480353 PSMB1P20618 241 aaKnown RBP13.64□□□□□ -0.23
CDK9-203ENST00000480353 CLK1P49759 484 aaKnown RBP13.64□□□□□ -0.23
CDK9-203ENST00000480353 ACKR1Q16570 336 aa13.64□□□□□ -0.23
CDK9-203ENST00000480353 C20orf204Q6ZNR8 217 aa13.64□□□□□ -0.23
CDK9-203ENST00000480353 MTDHQ86UE4 582 aaKnown RBP13.64□□□□□ -0.23
CDK9-203ENST00000480353 OR52P1PQ8NH57 321 aa13.64□□□□□ -0.23
CDK9-203ENST00000480353 PIGXQ8TBF5 258 aa13.64□□□□□ -0.23
CDK9-203ENST00000480353 S100PBPQ96BU1 408 aa13.64□□□□□ -0.23
CDK9-203ENST00000480353 ZNF775Q96BV0 537 aaPredicted RBP13.64□□□□□ -0.23
CDK9-203ENST00000480353 ZNF524Q96C55 264 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms