RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 NDUFAF6Q330K2 333 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 ELOA3BQ3SY89 546 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 KLHL22Q53GT1 634 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 SYT14P1Q58G82 188 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 TMEM164Q5U3C3 297 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 C5orf46Q6UWT4 87 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 RTL4Q6ZR62 310 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 CLVS1Q8IUQ0 354 aaPredicted RBP10.07□□□□□ -0.8
VTI1A-204ENST00000480057 ARMC10Q8N2F6 343 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 STX19Q8N4C7 294 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 IQCF1Q8N6M8 205 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 TMCO5AQ8N6Q1 288 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 ELOA3Q8NG57 546 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 OR4Q3Q8NH05 313 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 RAB2BQ8WUD1 216 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 RFKQ969G6 155 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 PMEPA1Q969W9 287 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 ISOC1Q96CN7 298 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 PLEKHA8Q96JA3 519 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 SAMD8Q96LT4 415 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 ZNF582Q96NG8 517 aaPredicted RBP10.07□□□□□ -0.8
VTI1A-204ENST00000480057 IL4I1Q96RQ9 567 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 LHPPQ9H008 270 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 UBQLN3Q9H347 655 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 CXorf56Q9H5V9 222 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 AKIRIN1Q9H9L7 192 aaPredicted RBP10.07□□□□□ -0.8
VTI1A-204ENST00000480057 ATP13A2Q9NQ11 1180 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 SDHAF3Q9NRP4 125 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 WDR70Q9NW82 654 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.07□□□□□ -0.8
VTI1A-204ENST00000480057 DNAH14Q0VDD8 3507 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 ZNF318Q5VUA4 2279 aa10.07□□□□□ -0.8
VTI1A-204ENST00000480057 EXPH5Q8NEV8 1989 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 IGLV3-32A0A0A0MS00 114 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 TRIM64BA6NI03 449 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 ENO4A6NNW6 628 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 C4orf47A7E2U8 309 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 M0R129 80 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 ADAM10O14672 748 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 HCRTR2O43614 444 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 OR7A10O76100 309 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 DKK1O94907 266 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 DBTP11182 482 aaKnown RBP10.06□□□□□ -0.8
VTI1A-204ENST00000480057 COX6A1P12074 109 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 MSX1P28360 303 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 HTR3AP46098 478 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 ST13P50502 369 aaKnown RBP10.06□□□□□ -0.8
VTI1A-204ENST00000480057 NUDT6P53370 316 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 GP2P55259 537 aaKnown RBP10.06□□□□□ -0.8
VTI1A-204ENST00000480057 FOXL2P58012 376 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 FXYD6P3P58550 94 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 ZNF91Q05481 1191 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 CRYZQ08257 329 aaKnown RBP10.06□□□□□ -0.8
VTI1A-204ENST00000480057 C17orf67Q0P5P2 114 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 ST3GAL4Q11206 333 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 RAB40BQ12829 278 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 ARMC4Q5T2S8 1044 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 AADACL4Q5VUY2 407 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 NXNL2Q5VZ03 156 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 TMEM81Q6P7N7 255 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 FAM199XQ6PEV8 388 aaPredicted RBP10.06□□□□□ -0.8
VTI1A-204ENST00000480057 CBLN3Q6UW01 205 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 LYPD8Q6UX82 237 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 NDUFAF7Q7L592 441 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 ZNF367Q7RTV3 350 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 OAFQ86UD1 273 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 MARCH3Q86UD3 253 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 ANKRD13BQ86YJ7 626 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 GID4Q8IVV7 300 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 ESX1Q8N693 406 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 GATSQ8NAP1 163 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 B4GALNT2Q8NHY0 566 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 ZNF563Q8TA94 476 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 TMEM234Q8WY98 164 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 C8orf44Q96CB5 159 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 TMEM80Q96HE8 168 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 LRR1Q96L50 414 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 SECISBP2Q96T21 854 aaKnown RBP10.06□□□□□ -0.8
VTI1A-204ENST00000480057 TSC22D3Q99576 134 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 DEFB126Q9BYW3 111 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 NDEL1Q9GZM8 345 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 TOR4AQ9NXH8 423 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 GPR83Q9NYM4 423 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 NCDNQ9UBB6 729 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 PISDQ9UG56 409 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 ZNF337Q9Y3M9 751 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 HS3ST3B1Q9Y662 390 aa10.06□□□□□ -0.8
VTI1A-204ENST00000480057 IGKV1D-42A0A075B6H8 117 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 ANKUB1A6NFN9 424 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 C21orf140B9A014 251 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 ETV2O00321 342 aaPredicted RBP10.05□□□□□ -0.8
VTI1A-204ENST00000480057 KPNA4O00629 521 aaPredicted RBP10.05□□□□□ -0.8
VTI1A-204ENST00000480057 IDH3BO43837 385 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 INMTO95050 263 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 NDUFB2O95178 105 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 FADS2O95864 444 aaKnown RBP10.05□□□□□ -0.8
VTI1A-204ENST00000480057 STSP08842 583 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 PEPDP12955 493 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 GP1BBP13224 206 aa10.05□□□□□ -0.8
VTI1A-204ENST00000480057 ICAM2P13598 275 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms