RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 INTS12Q96CB8 462 aaKnown RBP6.2□□□□□ -1.42
BRCA1-215ENST00000478531 KLHL15Q96M94 604 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 PSMG3-AS1Q96PY0 264 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 SPATA9Q9BWV2 254 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 CALHM2Q9HA72 323 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 EFCAB1Q9HAE3 211 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 CTPS2Q9NRF8 586 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 CLCF1Q9UBD9 225 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 SLC13A4Q9UKG4 626 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 NOTCH2Q04721 2471 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 NAV2Q8IVL1 2488 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 A0A1W2PNR3 127 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 CD8B2A6NJW9 211 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 GJE1A6NN92 205 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 PRSS44E7EML9 344 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 NDUFAB1O14561 156 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 EFNA2O43921 213 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 CXCL13O43927 109 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 TPST1O60507 370 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 SERPINB7O75635 380 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 TOXO94900 526 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 CLDN14O95500 239 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 TGM6O95932 706 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 TFPIP10646 304 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 PRG2P13727 222 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 ADH6P28332 368 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 PRKAR1BP31321 381 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 GZMMP51124 257 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 NCALDP61601 193 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 COPZ1P61923 177 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 MXRA7P84157 204 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 RBBP4Q09028 425 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 VMACQ2NL98 169 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 CTU2Q2VPK5 515 aaKnown RBP6.2□□□□□ -1.42
BRCA1-215ENST00000478531 LRRC23Q53EV4 343 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-215ENST00000478531 INTS11Q5TA45 600 aaKnown RBP6.2□□□□□ -1.42
BRCA1-215ENST00000478531 RIPPLY2Q5TAB7 128 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 HIST2H2BCQ6DN03 193 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 XKRXQ6PP77 449 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 ESPNLQ6ZVH7 1005 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 MAMDC2Q7Z304 686 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-215ENST00000478531 ARPINQ7Z6K5 226 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 SLC30A8Q8IWU4 369 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 ZNF440Q8IYI8 595 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 CCDC197Q8NCU1 140 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 OR2T12Q8NG77 320 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 OR2V1Q8NHB1 315 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 SLC26A7Q8TE54 656 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 ASB5Q8WWX0 329 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 FIG4Q92562 907 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 REXO5Q96IC2 774 aaKnown RBP6.2□□□□□ -1.42
BRCA1-215ENST00000478531 OR5B2Q96R09 309 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 PRRG4Q9BZD6 226 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 UCK2Q9BZX2 261 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 ACER3Q9NUN7 267 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 ARL8BQ9NVJ2 186 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 CMTM6Q9NX76 183 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 GMPR2Q9P2T1 348 aaKnown RBP6.2□□□□□ -1.42
BRCA1-215ENST00000478531 PLEKHB1Q9UF11 243 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-215ENST00000478531 CHST2Q9Y4C5 530 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 MAP1AP78559 2803 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-215ENST00000478531 TMED7-TICAM2A0A0A6YYA0 188 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 IGHV3-15A0A0B4J1V0 119 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 A0A0J9YW62 118 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 MBD3L4A6NDZ8 208 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-215ENST00000478531 MBD3L3A6NE82 208 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-215ENST00000478531 PRORSD1PA6NEY8 169 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 MBD3L5A6NJ08 208 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-215ENST00000478531 HSPB2A8KAH6 182 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 FAM220BPB1ANY3 271 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 EEF1E1-BLOC1S5C9J1V9 151 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 M0R3H8 397 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 ETV2O00321 342 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-215ENST00000478531 NME4O00746 187 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 DVL2O14641 736 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 EEF1E1O43324 174 aaKnown RBP6.19□□□□□ -1.42
BRCA1-215ENST00000478531 DNAJA2O60884 412 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 SYNGR4O95473 234 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 NTN1O95631 604 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 TMIGD3P0DMS9 266 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-215ENST00000478531 AGAP20933 346 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 COL8A1P27658 744 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 HTR1EP28566 365 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 GRNP28799 593 aaKnown RBP6.19□□□□□ -1.42
BRCA1-215ENST00000478531 TACR3P29371 465 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 PRDX6P30041 224 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 TIMP3P35625 211 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 SLC1A3P43003 542 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 POLR2HP52434 150 aaKnown RBP6.19□□□□□ -1.42
BRCA1-215ENST00000478531 ZNF136P52737 540 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 PCBP3P57721 371 aaKnown RBP6.19□□□□□ -1.42
BRCA1-215ENST00000478531 RGS8P57771 180 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-215ENST00000478531 HSPB2Q16082 182 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 SYT14P1Q58G82 188 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 SLC25A53Q5H9E4 307 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 PDSS1Q5T2R2 415 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 DHRS4L2Q6PKH6 230 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 ZNF550Q7Z398 422 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 GRINAQ7Z429 371 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 ADGRE4PQ86SQ3 457 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms