RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 ELMO2Q96JJ3 720 aa0.91□□□□□ -2.26
HPS3-205ENST00000478525 CITED1Q99966 193 aa0.91□□□□□ -2.26
HPS3-205ENST00000478525 CCL28Q9NRJ3 127 aa0.91□□□□□ -2.26
HPS3-205ENST00000478525 UTP6Q9NYH9 597 aaKnown RBP0.91□□□□□ -2.26
HPS3-205ENST00000478525 ZNF226Q9NYT6 803 aa0.91□□□□□ -2.26
HPS3-205ENST00000478525 NDUFA13Q9P0J0 144 aa0.91□□□□□ -2.26
HPS3-205ENST00000478525 STX8Q9UNK0 236 aa0.91□□□□□ -2.26
HPS3-205ENST00000478525 PP2D1A8MPX8 630 aa0.9□□□□□ -2.27
HPS3-205ENST00000478525 VGLL3A8MV65 326 aa0.9□□□□□ -2.27
HPS3-205ENST00000478525 ECI2O75521 394 aa0.9□□□□□ -2.27
HPS3-205ENST00000478525 IGLV2-23P01705 113 aa0.9□□□□□ -2.27
HPS3-205ENST00000478525 ADRA2AP08913 450 aa0.9□□□□□ -2.27
HPS3-205ENST00000478525 H2AFXP16104 143 aaPredicted RBP0.9□□□□□ -2.27
HPS3-205ENST00000478525 ZNF18P17022 549 aa0.9□□□□□ -2.27
HPS3-205ENST00000478525 ATP5A1P25705 553 aaKnown RBP0.9□□□□□ -2.27
HPS3-205ENST00000478525 SLC6A8P48029 635 aa0.9□□□□□ -2.27
HPS3-205ENST00000478525 UBE2AP49459 152 aa0.9□□□□□ -2.27
HPS3-205ENST00000478525 CNN1P51911 297 aaKnown RBP0.9□□□□□ -2.27
HPS3-205ENST00000478525 STX1BP61266 288 aa0.9□□□□□ -2.27
HPS3-205ENST00000478525 FAM199XQ6PEV8 388 aaPredicted RBP0.9□□□□□ -2.27
HPS3-205ENST00000478525 PCGF5Q86SE9 256 aa0.9□□□□□ -2.27
HPS3-205ENST00000478525 FIBINQ8TAL6 211 aa0.9□□□□□ -2.27
HPS3-205ENST00000478525 RGP1Q92546 391 aaPredicted RBP0.9□□□□□ -2.27
HPS3-205ENST00000478525 GAL3ST1Q99999 423 aa0.9□□□□□ -2.27
HPS3-205ENST00000478525 ZNF416Q9BWM5 594 aa0.9□□□□□ -2.27
HPS3-205ENST00000478525 SPATA16Q9BXB7 569 aa0.9□□□□□ -2.27
HPS3-205ENST00000478525 FAM153AQ9UHL3 310 aa0.9□□□□□ -2.27
HPS3-205ENST00000478525 CRLS1Q9UJA2 301 aa0.9□□□□□ -2.27
HPS3-205ENST00000478525 FBXW2Q9UKT8 454 aa0.9□□□□□ -2.27
HPS3-205ENST00000478525 IGKV2-24A0A0C4DH68 120 aa0.89□□□□□ -2.27
HPS3-205ENST00000478525 FOXE1O00358 373 aaPredicted RBP0.89□□□□□ -2.27
HPS3-205ENST00000478525 SRP72O76094 671 aaKnown RBP0.89□□□□□ -2.27
HPS3-205ENST00000478525 PSMC3P17980 439 aa0.89□□□□□ -2.27
HPS3-205ENST00000478525 KRT83P78385 493 aa0.89□□□□□ -2.27
HPS3-205ENST00000478525 IRF4Q15306 451 aa0.89□□□□□ -2.27
HPS3-205ENST00000478525 SCYL2Q6P3W7 929 aa0.89□□□□□ -2.27
HPS3-205ENST00000478525 LRRC70Q7Z2Q7 622 aa0.89□□□□□ -2.27
HPS3-205ENST00000478525 OR6C4Q8NGE1 309 aa0.89□□□□□ -2.27
HPS3-205ENST00000478525 PELI1Q96FA3 418 aa0.89□□□□□ -2.27
HPS3-205ENST00000478525 SLC25A51Q9H1U9 297 aa0.89□□□□□ -2.27
HPS3-205ENST00000478525 SAMSN1Q9NSI8 373 aaKnown RBP0.89□□□□□ -2.27
HPS3-205ENST00000478525 WRAP73Q9P2S5 460 aaPredicted RBP0.89□□□□□ -2.27
HPS3-205ENST00000478525 TET2Q6N021 2002 aaPredicted RBP0.89□□□□□ -2.27
HPS3-205ENST00000478525 FRMPD3Q5JV73 1810 aa0.89□□□□□ -2.27
HPS3-205ENST00000478525 ZBTB14O43829 449 aa0.88□□□□□ -2.27
HPS3-205ENST00000478525 VAMP5O95183 116 aa0.88□□□□□ -2.27
HPS3-205ENST00000478525 LINC00869P0C866 280 aa0.88□□□□□ -2.27
HPS3-205ENST00000478525 TCN2P20062 427 aa0.88□□□□□ -2.27
HPS3-205ENST00000478525 CRISP1P54107 249 aa0.88□□□□□ -2.27
HPS3-205ENST00000478525 NME5P56597 212 aa0.88□□□□□ -2.27
HPS3-205ENST00000478525 CNTN2Q02246 1040 aa0.88□□□□□ -2.27
HPS3-205ENST00000478525 BDH1Q02338 343 aa0.88□□□□□ -2.27
HPS3-205ENST00000478525 YWHAHQ04917 246 aaPredicted RBP0.88□□□□□ -2.27
HPS3-205ENST00000478525 TIGITQ495A1 244 aa0.88□□□□□ -2.27
HPS3-205ENST00000478525 SLC39A12Q504Y0 691 aa0.88□□□□□ -2.27
HPS3-205ENST00000478525 VSIG1Q86XK7 387 aa0.88□□□□□ -2.27
HPS3-205ENST00000478525 UNC45BQ8IWX7 931 aa0.88□□□□□ -2.27
HPS3-205ENST00000478525 BRSK1Q8TDC3 778 aa0.88□□□□□ -2.27
HPS3-205ENST00000478525 OR5B2Q96R09 309 aa0.88□□□□□ -2.27
HPS3-205ENST00000478525 SMPD3Q9NY59 655 aaPredicted RBP0.88□□□□□ -2.27
HPS3-205ENST00000478525 ZNF490Q9ULM2 529 aaPredicted RBP0.88□□□□□ -2.27
HPS3-205ENST00000478525 CARMIL3Q8ND23 1372 aa0.87□□□□□ -2.27
HPS3-205ENST00000478525 A0A0U1RRA0 63 aa0.87□□□□□ -2.27
HPS3-205ENST00000478525 H3BMQ9 156 aa0.87□□□□□ -2.27
HPS3-205ENST00000478525 H3BTX0 84 aa0.87□□□□□ -2.27
HPS3-205ENST00000478525 TPST2O60704 377 aa0.87□□□□□ -2.27
HPS3-205ENST00000478525 STX11O75558 287 aa0.87□□□□□ -2.27
HPS3-205ENST00000478525 CDRT1O95170 752 aa0.87□□□□□ -2.27
HPS3-205ENST00000478525 LGI1O95970 557 aa0.87□□□□□ -2.27
HPS3-205ENST00000478525 PDHBP11177 359 aa0.87□□□□□ -2.27
HPS3-205ENST00000478525 TSPAN8P19075 237 aa0.87□□□□□ -2.27
HPS3-205ENST00000478525 ASMTP46597 345 aa0.87□□□□□ -2.27
HPS3-205ENST00000478525 BIDP55957 195 aa0.87□□□□□ -2.27
HPS3-205ENST00000478525 SSTP61278 116 aa0.87□□□□□ -2.27
HPS3-205ENST00000478525 MEF2CQ06413 473 aaPredicted RBP0.87□□□□□ -2.27
HPS3-205ENST00000478525 NDUFA9Q16795 377 aa0.87□□□□□ -2.27
HPS3-205ENST00000478525 HFEQ30201 348 aa0.87□□□□□ -2.27
HPS3-205ENST00000478525 BOLA3Q53S33 107 aa0.87□□□□□ -2.27
HPS3-205ENST00000478525 KLF17Q5JT82 389 aaPredicted RBP0.87□□□□□ -2.27
HPS3-205ENST00000478525 C1orf94Q6P1W5 598 aa0.87□□□□□ -2.27
HPS3-205ENST00000478525 ZNF620Q6ZNG0 422 aa0.87□□□□□ -2.27
HPS3-205ENST00000478525 ACOT7LQ6ZUV0 252 aa0.87□□□□□ -2.27
HPS3-205ENST00000478525 LINC01561Q8N1V8 128 aa0.87□□□□□ -2.27
HPS3-205ENST00000478525 OR5W2Q8NH69 310 aa0.87□□□□□ -2.27
HPS3-205ENST00000478525 M1APQ8TC57 530 aa0.87□□□□□ -2.27
HPS3-205ENST00000478525 SDSLQ96GA7 329 aa0.87□□□□□ -2.27
HPS3-205ENST00000478525 FCRL1Q96LA6 429 aa0.87□□□□□ -2.27
HPS3-205ENST00000478525 ROGDIQ9GZN7 287 aa0.87□□□□□ -2.27
HPS3-205ENST00000478525 SLC40A1Q9NP59 571 aa0.87□□□□□ -2.27
HPS3-205ENST00000478525 NDUFA7O95182 113 aa0.86□□□□□ -2.27
HPS3-205ENST00000478525 KPNA2P52292 529 aaKnown RBP0.86□□□□□ -2.27
HPS3-205ENST00000478525 GALK2Q01415 458 aa0.86□□□□□ -2.27
HPS3-205ENST00000478525 RGS1Q08116 209 aa0.86□□□□□ -2.27
HPS3-205ENST00000478525 LAGE3Q14657 143 aa0.86□□□□□ -2.27
HPS3-205ENST00000478525 LRRC10Q5BKY1 277 aa0.86□□□□□ -2.27
HPS3-205ENST00000478525 TMEM184AQ6ZMB5 413 aa0.86□□□□□ -2.27
HPS3-205ENST00000478525 PRSS41Q7RTY9 318 aa0.86□□□□□ -2.27
HPS3-205ENST00000478525 C15orf56Q8N910 161 aa0.86□□□□□ -2.27
HPS3-205ENST00000478525 LPCAT1Q8NF37 534 aa0.86□□□□□ -2.27
HPS3-205ENST00000478525 OR9G1Q8NH87 305 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms