RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 ACER3Q9NUN7 267 aa13.86□□□□□ -0.19
SEC13-215ENST00000477547 SPRR3Q9UBC9 169 aa13.86□□□□□ -0.19
SEC13-215ENST00000477547 CACNA1DQ01668 2161 aa13.85□□□□□ -0.19
SEC13-215ENST00000477547 SPENQ96T58 3664 aaKnown RBP13.85□□□□□ -0.19
SEC13-215ENST00000477547 A0A1B0GWA3 101 aa13.85□□□□□ -0.19
SEC13-215ENST00000477547 ENO4A6NNW6 628 aa13.85□□□□□ -0.19
SEC13-215ENST00000477547 ETV2O00321 342 aaPredicted RBP13.85□□□□□ -0.19
SEC13-215ENST00000477547 AQP7O14520 342 aa13.85□□□□□ -0.19
SEC13-215ENST00000477547 SUSD5O60279 629 aa13.85□□□□□ -0.19
SEC13-215ENST00000477547 NTN1O95631 604 aa13.85□□□□□ -0.19
SEC13-215ENST00000477547 POU3F2P20265 443 aaPredicted RBP13.85□□□□□ -0.19
SEC13-215ENST00000477547 SLC1A3P43003 542 aa13.85□□□□□ -0.19
SEC13-215ENST00000477547 ERFP50548 548 aa13.85□□□□□ -0.19
SEC13-215ENST00000477547 GFRA1P56159 465 aa13.85□□□□□ -0.19
SEC13-215ENST00000477547 SELENBP1Q13228 472 aa13.85□□□□□ -0.19
SEC13-215ENST00000477547 KRTCAP3Q53RY4 240 aa13.85□□□□□ -0.19
SEC13-215ENST00000477547 SLC25A53Q5H9E4 307 aa13.85□□□□□ -0.19
SEC13-215ENST00000477547 DCST1Q5T197 706 aa13.85□□□□□ -0.19
SEC13-215ENST00000477547 ARHGAP11AQ6P4F7 1023 aa13.85□□□□□ -0.19
SEC13-215ENST00000477547 AAGABQ6PD74 315 aa13.85□□□□□ -0.19
SEC13-215ENST00000477547 SMPDL3BQ92485 455 aa13.85□□□□□ -0.19
SEC13-215ENST00000477547 PYURFQ96I23 114 aa13.85□□□□□ -0.19
SEC13-215ENST00000477547 SEPHS2Q99611 448 aa13.85□□□□□ -0.19
SEC13-215ENST00000477547 PRR14Q9BWN1 585 aa13.85□□□□□ -0.19
SEC13-215ENST00000477547 TMEM185BQ9H7F4 350 aa13.85□□□□□ -0.19
SEC13-215ENST00000477547 PLEKHB1Q9UF11 243 aaPredicted RBP13.85□□□□□ -0.19
SEC13-215ENST00000477547 A0A1B0GTH9 108 aa13.84□□□□□ -0.19
SEC13-215ENST00000477547 AQP12BA6NM10 295 aa13.84□□□□□ -0.19
SEC13-215ENST00000477547 hCG_2039718K7EN88 272 aa13.84□□□□□ -0.19
SEC13-215ENST00000477547 TPST2O60704 377 aa13.84□□□□□ -0.19
SEC13-215ENST00000477547 SEMG1P04279 462 aa13.84□□□□□ -0.19
SEC13-215ENST00000477547 EDN3P14138 238 aa13.84□□□□□ -0.19
SEC13-215ENST00000477547 NQO1P15559 274 aaKnown RBP13.84□□□□□ -0.19
SEC13-215ENST00000477547 CHMP24386 653 aa13.84□□□□□ -0.19
SEC13-215ENST00000477547 PSMA4P25789 261 aaKnown RBP13.84□□□□□ -0.19
SEC13-215ENST00000477547 ADH6P28332 368 aa13.84□□□□□ -0.19
SEC13-215ENST00000477547 TACR3P29371 465 aa13.84□□□□□ -0.19
SEC13-215ENST00000477547 HTR3AP46098 478 aa13.84□□□□□ -0.19
SEC13-215ENST00000477547 POLR2HP52434 150 aaKnown RBP13.84□□□□□ -0.19
SEC13-215ENST00000477547 DLX5P56178 289 aa13.84□□□□□ -0.19
SEC13-215ENST00000477547 TAS2R41P59536 307 aa13.84□□□□□ -0.19
SEC13-215ENST00000477547 VLDLRP98155 873 aa13.84□□□□□ -0.19
SEC13-215ENST00000477547 CRYZQ08257 329 aaKnown RBP13.84□□□□□ -0.19
SEC13-215ENST00000477547 OR1Q1Q15612 314 aa13.84□□□□□ -0.19
SEC13-215ENST00000477547 ALG10BQ5I7T1 473 aa13.84□□□□□ -0.19
SEC13-215ENST00000477547 ENTPD8Q5MY95 495 aa13.84□□□□□ -0.19
SEC13-215ENST00000477547 C3orf33Q6P1S2 294 aa13.84□□□□□ -0.19
SEC13-215ENST00000477547 GFRALQ6UXV0 394 aa13.84□□□□□ -0.19
SEC13-215ENST00000477547 AQP12AQ8IXF9 295 aa13.84□□□□□ -0.19
SEC13-215ENST00000477547 LSMEM1Q8N8F7 131 aa13.84□□□□□ -0.19
SEC13-215ENST00000477547 RNF217Q8TC41 542 aa13.84□□□□□ -0.19
SEC13-215ENST00000477547 ADAMTS16Q8TE57 1224 aa13.84□□□□□ -0.19
SEC13-215ENST00000477547 POP5Q969H6 163 aaKnown RBP13.84□□□□□ -0.19
SEC13-215ENST00000477547 C3orf49Q96BT1 292 aa13.84□□□□□ -0.19
SEC13-215ENST00000477547 RSRC1Q96IZ7 334 aaKnown RBP13.84□□□□□ -0.19
SEC13-215ENST00000477547 PRRC1Q96M27 445 aa13.84□□□□□ -0.19
SEC13-215ENST00000477547 UGT2B28Q9BY64 529 aa13.84□□□□□ -0.19
SEC13-215ENST00000477547 AMBRA1Q9C0C7 1298 aa13.84□□□□□ -0.19
SEC13-215ENST00000477547 TMEM27Q9HBJ8 222 aa13.84□□□□□ -0.19
SEC13-215ENST00000477547 SELENONQ9NZV5 590 aa13.84□□□□□ -0.19
SEC13-215ENST00000477547 TNFRSF10DQ9UBN6 386 aa13.84□□□□□ -0.19
SEC13-215ENST00000477547 A0A0B4J2E0 115 aa13.83□□□□□ -0.2
SEC13-215ENST00000477547 A0A1B0GVC2 190 aa13.83□□□□□ -0.2
SEC13-215ENST00000477547 A0A1B0GX12 115 aa13.83□□□□□ -0.2
SEC13-215ENST00000477547 DHRS12A0PJE2 317 aa13.83□□□□□ -0.2
SEC13-215ENST00000477547 ACTL6AO96019 429 aa13.83□□□□□ -0.2
SEC13-215ENST00000477547 PEPDP12955 493 aa13.83□□□□□ -0.2
SEC13-215ENST00000477547 BMP7P18075 431 aa13.83□□□□□ -0.2
SEC13-215ENST00000477547 IL11P20809 199 aa13.83□□□□□ -0.2
SEC13-215ENST00000477547 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.83□□□□□ -0.26e-6■□□□□ 8.6
SEC13-215ENST00000477547 NHSL2Q5HYW2 709 aa13.83□□□□□ -0.2
SEC13-215ENST00000477547 ZNF613Q6PF04 617 aa13.83□□□□□ -0.2
SEC13-215ENST00000477547 TSPYL5Q86VY4 417 aaPredicted RBP13.83□□□□□ -0.2
SEC13-215ENST00000477547 LSRQ86X29 649 aaPredicted RBP13.83□□□□□ -0.2
SEC13-215ENST00000477547 ADGRG5Q8IZF4 528 aa13.83□□□□□ -0.2
SEC13-215ENST00000477547 PHF10Q8WUB8 498 aaKnown RBP13.83□□□□□ -0.2
SEC13-215ENST00000477547 ABTB1Q969K4 478 aaPredicted RBP13.83□□□□□ -0.2
SEC13-215ENST00000477547 SARAFQ96BY9 339 aa13.83□□□□□ -0.2
SEC13-215ENST00000477547 POLR2J2Q9GZM3 115 aaKnown RBP13.83□□□□□ -0.2
SEC13-215ENST00000477547 POLR2J3Q9H1A7 115 aaKnown RBP13.83□□□□□ -0.2
SEC13-215ENST00000477547 MAGIXQ9H6Y5 334 aa13.83□□□□□ -0.2
SEC13-215ENST00000477547 CHRNA9Q9UGM1 479 aa13.83□□□□□ -0.2
SEC13-215ENST00000477547 OSGIN1Q9UJX0 560 aa13.83□□□□□ -0.2
SEC13-215ENST00000477547 SPIN1Q9Y657 262 aaPredicted RBP13.83□□□□□ -0.2
SEC13-215ENST00000477547 TMED7-TICAM2A0A0A6YYA0 188 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 TRAPPC13A5PLN9 417 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 OR14I1A6ND48 311 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 ELOA3DA6NLF2 546 aaPredicted RBP13.82□□□□□ -0.2
SEC13-215ENST00000477547 NPIPA2E9PIF3 369 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 NPIPA3F8WFD2 350 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 LINC01387J3KSC0 135 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 ZNHIT1O43257 154 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 SEC14L5O43304 696 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 SEMA7AO75326 666 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 OR5F1O95221 314 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 MT-ND1P03886 318 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 FABP3P05413 133 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 GPIP06744 558 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 ABOP16442 354 aa13.82□□□□□ -0.2
SEC13-215ENST00000477547 CCNA2P20248 432 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms