RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 MTNR1BP49286 362 aa13.58□□□□□ -0.24
HDAC6-220ENST00000477528 ACY1Q03154 408 aa13.58□□□□□ -0.24
HDAC6-220ENST00000477528 DUSP8Q13202 625 aa13.58□□□□□ -0.24
HDAC6-220ENST00000477528 RPL22L1Q6P5R6 122 aaKnown RBP13.58□□□□□ -0.24
HDAC6-220ENST00000477528 MCEMP1Q8IX19 187 aa13.58□□□□□ -0.24
HDAC6-220ENST00000477528 MSANTD3Q96H12 275 aa13.58□□□□□ -0.24
HDAC6-220ENST00000477528 ATG5Q9H1Y0 275 aa13.58□□□□□ -0.24
HDAC6-220ENST00000477528 ABI3Q9P2A4 366 aa13.58□□□□□ -0.24
HDAC6-220ENST00000477528 PPM1DO15297 605 aa13.58□□□□□ -0.24
HDAC6-220ENST00000477528 OR2T1O43869 369 aa13.58□□□□□ -0.24
HDAC6-220ENST00000477528 GPRIN2O60269 458 aa13.58□□□□□ -0.24
HDAC6-220ENST00000477528 NCR1O76036 304 aa13.58□□□□□ -0.24
HDAC6-220ENST00000477528 GTF2F2P13984 249 aa13.58□□□□□ -0.24
HDAC6-220ENST00000477528 RPS5P46782 204 aaKnown RBP13.58□□□□□ -0.24
HDAC6-220ENST00000477528 BCL2L15Q5TBC7 163 aa13.58□□□□□ -0.24
HDAC6-220ENST00000477528 HACD4Q5VWC8 232 aa13.58□□□□□ -0.24
HDAC6-220ENST00000477528 HBMQ6B0K9 141 aa13.58□□□□□ -0.24
HDAC6-220ENST00000477528 ZNF620Q6ZNG0 422 aa13.58□□□□□ -0.24
HDAC6-220ENST00000477528 TP53I13Q8NBR0 393 aaPredicted RBP13.58□□□□□ -0.24
HDAC6-220ENST00000477528 SLC22A8Q8TCC7 542 aa13.58□□□□□ -0.24
HDAC6-220ENST00000477528 FGF14Q92915 247 aa13.58□□□□□ -0.24
HDAC6-220ENST00000477528 TEX13CA0A0J9YWL9 993 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 L7N2F9 121 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 CLEC2LP0C7M8 214 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 OR2T7P0C7T2 308 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 TRHRP34981 398 aaPredicted RBP13.57□□□□□ -0.24
HDAC6-220ENST00000477528 CBFBQ13951 182 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 GPR139Q6DWJ6 353 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 ZNF322Q6U7Q0 402 aaPredicted RBP13.57□□□□□ -0.24
HDAC6-220ENST00000477528 OR5T3Q8NGG3 340 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 OR2T27Q8NH04 317 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 GPR148Q8TDV2 347 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 KIAA1143Q96AT1 154 aaPredicted RBP13.57□□□□□ -0.24
HDAC6-220ENST00000477528 HYLS1Q96M11 299 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 TRPV4Q9HBA0 871 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 PCDH10Q9P2E7 1040 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 LRIT1Q9P2V4 623 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 MYO10Q9HD67 2058 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 F5P12259 2224 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 WASHC1A8K0Z3 465 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 ZNF264O43296 627 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 MOSPD3O75425 235 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 SULT1C4O75897 302 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 HMGA2P52926 109 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 GARNL3Q5VVW2 1013 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 WASH2PQ6VEQ5 465 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 TMED4Q7Z7H5 227 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 TMEM17Q86X19 198 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 CCL4L1Q8NHW4 92 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 BAHD1Q8TBE0 780 aaPredicted RBP13.57□□□□□ -0.24
HDAC6-220ENST00000477528 ADAMTS14Q8WXS8 1223 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 SLC25A46Q96AG3 418 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 MSLNLQ96KJ4 702 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 OPALINQ96PE5 141 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 IRF2BPLQ9H1B7 796 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 ZNF304Q9HCX3 659 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 MMP17Q9ULZ9 603 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 SRPK3Q9UPE1 567 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 DISC1C4P0D8 188 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 ITGB8P26012 769 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 CASP3P42574 277 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 MAN2A2P49641 1150 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 CMIPQ8IY22 773 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 ZNF417Q8TAU3 575 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 NEK7Q8TDX7 302 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 MRGPRX1Q96LB2 322 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 PRDM7Q9NQW5 492 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 EFCAB7A8K855 629 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 FGF17O60258 216 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 FCER2P06734 321 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 DNASE1P24855 282 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 RAB11BQ15907 218 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 PRAMEF17Q5VTA0 474 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 ARMC10Q8N2F6 343 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 INTS14Q96SY0 518 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 MAP3K3Q99759 626 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 UGT2A1Q9Y4X1 527 aa13.57□□□□□ -0.24
HDAC6-220ENST00000477528 NUP214P35658 2090 aaPredicted RBP13.56□□□□□ -0.24
HDAC6-220ENST00000477528 HCKP08631 526 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 CPEP16870 476 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 RBMS1P29558 406 aaKnown RBP13.56□□□□□ -0.24
HDAC6-220ENST00000477528 CRABP1P29762 137 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 GZMMP51124 257 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 ZNF81P51508 661 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 PCBP4P57723 403 aaKnown RBP13.56□□□□□ -0.24
HDAC6-220ENST00000477528 OC90Q02509 493 aaPredicted RBP13.56□□□□□ -0.24
HDAC6-220ENST00000477528 C10orf111Q8N326 155 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 IL17RCQ8NAC3 791 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 OR8S1Q8NH09 359 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 CNOT9Q92600 299 aaKnown RBP13.56□□□□□ -0.24
HDAC6-220ENST00000477528 TAS2R8Q9NYW2 309 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 SERGEFQ9UGK8 458 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 NUBP2Q9Y5Y2 271 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 FXYD6-FXYD2A0A087WZ82 144 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 CENPBD1B2RD01 187 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 PEX12O00623 359 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 DUSP3P51452 185 aaPredicted RBP13.56□□□□□ -0.24
HDAC6-220ENST00000477528 PSPHP78330 225 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 SFRP4Q6FHJ7 346 aaPredicted RBP13.56□□□□□ -0.24
HDAC6-220ENST00000477528 PAQR6Q6TCH4 344 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms