RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 GSNP06396 782 aa9.59□□□□□ -0.87
SEC13-214ENST00000476597 KITP10721 976 aa9.59□□□□□ -0.87
SEC13-214ENST00000476597 FKBP2P26885 142 aaKnown RBP9.59□□□□□ -0.87
SEC13-214ENST00000476597 CDKN2CP42773 168 aa9.59□□□□□ -0.87
SEC13-214ENST00000476597 DIO1P49895 249 aa9.59□□□□□ -0.87
SEC13-214ENST00000476597 NR1H2P55055 460 aa9.59□□□□□ -0.87
SEC13-214ENST00000476597 PLAURQ03405 335 aa9.59□□□□□ -0.87
SEC13-214ENST00000476597 RASGEF1BQ0VAM2 473 aa9.59□□□□□ -0.87
SEC13-214ENST00000476597 P2RY6Q15077 328 aa9.59□□□□□ -0.87
SEC13-214ENST00000476597 SLC9B1Q4ZJI4 515 aa9.59□□□□□ -0.87
SEC13-214ENST00000476597 PDCD4Q53EL6 469 aaKnown RBP9.59□□□□□ -0.87
SEC13-214ENST00000476597 GPAT3Q53EU6 434 aa9.59□□□□□ -0.87
SEC13-214ENST00000476597 SFRP5Q5T4F7 317 aa9.59□□□□□ -0.87
SEC13-214ENST00000476597 C20orf204Q6ZNR8 217 aa9.59□□□□□ -0.87
SEC13-214ENST00000476597 LRRC74BQ6ZQY2 392 aa9.59□□□□□ -0.87
SEC13-214ENST00000476597 HMGN2P46Q86SG4 172 aa9.59□□□□□ -0.87
SEC13-214ENST00000476597 WFDC8Q8IUA0 241 aa9.59□□□□□ -0.87
SEC13-214ENST00000476597 ANKFN1Q8N957 763 aa9.59□□□□□ -0.87
SEC13-214ENST00000476597 ZNF563Q8TA94 476 aa9.59□□□□□ -0.87
SEC13-214ENST00000476597 SLC25A43Q8WUT9 341 aaPredicted RBP9.59□□□□□ -0.87
SEC13-214ENST00000476597 ZNF75CPQ92670 426 aaPredicted RBP9.59□□□□□ -0.87
SEC13-214ENST00000476597 PMM1Q92871 262 aa9.59□□□□□ -0.87
SEC13-214ENST00000476597 S100PBPQ96BU1 408 aa9.59□□□□□ -0.87
SEC13-214ENST00000476597 OR5B2Q96R09 309 aa9.59□□□□□ -0.87
SEC13-214ENST00000476597 ZBTB18Q99592 522 aa9.59□□□□□ -0.87
SEC13-214ENST00000476597 TMEM204Q9BSN7 226 aa9.59□□□□□ -0.87
SEC13-214ENST00000476597 SLC38A1Q9H2H9 487 aa9.59□□□□□ -0.87
SEC13-214ENST00000476597 GSX1Q9H4S2 264 aaPredicted RBP9.59□□□□□ -0.87
SEC13-214ENST00000476597 MTHFD2LQ9H903 347 aaPredicted RBP9.59□□□□□ -0.87
SEC13-214ENST00000476597 EXOSC3Q9NQT5 275 aaKnown RBP9.59□□□□□ -0.87
SEC13-214ENST00000476597 CTPS2Q9NRF8 586 aa9.59□□□□□ -0.87
SEC13-214ENST00000476597 NKIRAS1Q9NYS0 192 aa9.59□□□□□ -0.87
SEC13-214ENST00000476597 KLHL9Q9P2J3 617 aa9.59□□□□□ -0.87
SEC13-214ENST00000476597 NSD1Q96L73 2696 aaPredicted RBP9.58□□□□□ -0.88
SEC13-214ENST00000476597 AGAP5A6NIR3 686 aa9.58□□□□□ -0.88
SEC13-214ENST00000476597 ZNF724A8MTY0 619 aa9.58□□□□□ -0.88
SEC13-214ENST00000476597 SULT2B1O00204 365 aa9.58□□□□□ -0.88
SEC13-214ENST00000476597 KLF11O14901 512 aa9.58□□□□□ -0.88
SEC13-214ENST00000476597 SMPD2O60906 423 aa9.58□□□□□ -0.88
SEC13-214ENST00000476597 ADAM11O75078 769 aa9.58□□□□□ -0.88
SEC13-214ENST00000476597 ERLIN1O75477 346 aa9.58□□□□□ -0.88
SEC13-214ENST00000476597 SLC22A3O75751 556 aa9.58□□□□□ -0.88
SEC13-214ENST00000476597 KRT75O95678 551 aa9.58□□□□□ -0.88
SEC13-214ENST00000476597 ADAP00813 363 aa9.58□□□□□ -0.88
SEC13-214ENST00000476597 IL6P05231 212 aa9.58□□□□□ -0.88
SEC13-214ENST00000476597 IDO1P14902 403 aa9.58□□□□□ -0.88
SEC13-214ENST00000476597 RYKP34925 604 aa9.58□□□□□ -0.88
SEC13-214ENST00000476597 OR3A2P47893 321 aa9.58□□□□□ -0.88
SEC13-214ENST00000476597 CLK1P49759 484 aaKnown RBP9.58□□□□□ -0.88
SEC13-214ENST00000476597 ANXA11P50995 505 aaKnown RBP9.58□□□□□ -0.88
SEC13-214ENST00000476597 CSNK2A1P68400 391 aaPredicted RBP9.58□□□□□ -0.88
SEC13-214ENST00000476597 HPCAP84074 193 aa9.58□□□□□ -0.88
SEC13-214ENST00000476597 ITGADQ13349 1161 aa9.58□□□□□ -0.88
SEC13-214ENST00000476597 PDK3Q15120 406 aa9.58□□□□□ -0.88
SEC13-214ENST00000476597 TSC22D1Q15714 1073 aa9.58□□□□□ -0.88
SEC13-214ENST00000476597 MAPK11Q15759 364 aa9.58□□□□□ -0.88
SEC13-214ENST00000476597 SYT14P1Q58G82 188 aa9.58□□□□□ -0.88
SEC13-214ENST00000476597 COX20Q5RI15 118 aa9.58□□□□□ -0.88
SEC13-214ENST00000476597 NXNQ6DKJ4 435 aa9.58□□□□□ -0.88
SEC13-214ENST00000476597 PRSS57Q6UWY2 283 aa9.58□□□□□ -0.88
SEC13-214ENST00000476597 ZNF704Q6ZNC4 412 aaPredicted RBP9.58□□□□□ -0.88
SEC13-214ENST00000476597 GRINAQ7Z429 371 aa9.58□□□□□ -0.88
SEC13-214ENST00000476597 MAVSQ7Z434 540 aa9.58□□□□□ -0.88
SEC13-214ENST00000476597 MTDHQ86UE4 582 aaKnown RBP9.58□□□□□ -0.88
SEC13-214ENST00000476597 ADGRG3Q86Y34 549 aa9.58□□□□□ -0.88
SEC13-214ENST00000476597 P3H2Q8IVL5 708 aa9.58□□□□□ -0.88
SEC13-214ENST00000476597 CMIPQ8IY22 773 aa9.58□□□□□ -0.88
SEC13-214ENST00000476597 ARFGAP2Q8N6H7 521 aa9.58□□□□□ -0.88
SEC13-214ENST00000476597 PIWIL2Q8TC59 973 aaKnown RBP9.58□□□□□ -0.88
SEC13-214ENST00000476597 IGFBPL1Q8WX77 278 aa9.58□□□□□ -0.88
SEC13-214ENST00000476597 HSD17B8Q92506 261 aa9.58□□□□□ -0.88
SEC13-214ENST00000476597 CNOT9Q92600 299 aaKnown RBP9.58□□□□□ -0.88
SEC13-214ENST00000476597 ZNF775Q96BV0 537 aaPredicted RBP9.58□□□□□ -0.88
SEC13-214ENST00000476597 PLPPR2Q96GM1 343 aa9.58□□□□□ -0.88
SEC13-214ENST00000476597 C18orf12Q96KH6 178 aa9.58□□□□□ -0.88
SEC13-214ENST00000476597 CCL19Q99731 98 aa9.58□□□□□ -0.88
SEC13-214ENST00000476597 USB1Q9BQ65 265 aaKnown RBP9.58□□□□□ -0.88
SEC13-214ENST00000476597 ZIM2Q9NZV7 527 aa9.58□□□□□ -0.88
SEC13-214ENST00000476597 SPIN1Q9Y657 262 aaPredicted RBP9.58□□□□□ -0.88
SEC13-214ENST00000476597 NAV3Q8IVL0 2385 aa9.57□□□□□ -0.88
SEC13-214ENST00000476597 IGKV3D-15A0A087WSY6 115 aa9.57□□□□□ -0.88
SEC13-214ENST00000476597 RFXANKO14593 260 aa9.57□□□□□ -0.88
SEC13-214ENST00000476597 PMS2P2O95744 297 aa9.57□□□□□ -0.88
SEC13-214ENST00000476597 PLAUP00749 431 aa9.57□□□□□ -0.88
SEC13-214ENST00000476597 CHRM4P08173 479 aa9.57□□□□□ -0.88
SEC13-214ENST00000476597 ZCCHC18P0CG32 403 aa9.57□□□□□ -0.88
SEC13-214ENST00000476597 RPS4Y1P22090 263 aaKnown RBP9.57□□□□□ -0.88
SEC13-214ENST00000476597 IL32P24001 234 aa9.57□□□□□ -0.88
SEC13-214ENST00000476597 EDNRAP25101 427 aa9.57□□□□□ -0.88
SEC13-214ENST00000476597 MAGEA8P43361 318 aa9.57□□□□□ -0.88
SEC13-214ENST00000476597 HTR3AP46098 478 aa9.57□□□□□ -0.88
SEC13-214ENST00000476597 IDH2P48735 452 aaKnown RBP9.57□□□□□ -0.88
SEC13-214ENST00000476597 MVDP53602 400 aa9.57□□□□□ -0.88
SEC13-214ENST00000476597 TAB1Q15750 504 aa9.57□□□□□ -0.88
SEC13-214ENST00000476597 GSTA3Q16772 222 aa9.57□□□□□ -0.88
SEC13-214ENST00000476597 Q6ZT83 130 aa9.57□□□□□ -0.88
SEC13-214ENST00000476597 GALNT5Q7Z7M9 940 aa9.57□□□□□ -0.88
SEC13-214ENST00000476597 KISS1RQ969F8 398 aaPredicted RBP9.57□□□□□ -0.88
SEC13-214ENST00000476597 ARL5BQ96KC2 179 aa9.57□□□□□ -0.88
SEC13-214ENST00000476597 OR52B2Q96RD2 323 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms