RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 J3QLW9 94 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 CSF2P04141 144 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 SBK2P0C263 348 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 ZNF19P17023 458 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 NAT1P18440 290 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 FNTBP49356 437 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 OR12D2P58182 307 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 COPZ1P61923 177 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 ZNF85Q03923 595 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 SLC3A1Q07837 685 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 GPR50Q13585 617 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 RPL13AP3Q6NVV1 102 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 ZNF595Q8IYB9 648 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 OR52E2Q8NGJ4 325 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 OR5W2Q8NH69 310 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 SETD6Q8TBK2 473 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 AP3S1Q92572 193 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 TP53INP1Q96A56 240 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 ZMYND19Q96E35 227 aaPredicted RBP12.95□□□□□ -0.34
UBXN11-214ENST00000475591 TCTN2Q96GX1 697 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 ERMAPQ96PL5 475 aaPredicted RBP12.95□□□□□ -0.34
UBXN11-214ENST00000475591 TRIM2Q9C040 744 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 Q9N2J8 555 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.95□□□□□ -0.34
UBXN11-214ENST00000475591 ASB6Q9NWX5 421 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 FBXL21Q9UKT6 434 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 RBMX2Q9Y388 322 aaKnown RBP12.95□□□□□ -0.34
UBXN11-214ENST00000475591 PCDHGB2Q9Y5G2 931 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 THADAQ6YHU6 1953 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 PCDH15Q96QU1 1955 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 SLC22A31A6NKX4 558 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 MCIDASD6RGH6 385 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 SRPX2O60687 465 aaPredicted RBP12.95□□□□□ -0.34
UBXN11-214ENST00000475591 PRAMEF2O60811 474 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 RGS9O75916 674 aaPredicted RBP12.95□□□□□ -0.34
UBXN11-214ENST00000475591 NSA2O95478 260 aaKnown RBP12.95□□□□□ -0.34
UBXN11-214ENST00000475591 CLPSP04118 112 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 IFI6P09912 130 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 HIST1H1CP16403 213 aaKnown RBP12.95□□□□□ -0.34
UBXN11-214ENST00000475591 ZNF3P17036 446 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 SHC1P29353 583 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 ACVR1BP36896 505 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 NR4A2P43354 598 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 FASLGP48023 281 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 IGLV3-21P80748 117 aaPredicted RBP12.95□□□□□ -0.34
UBXN11-214ENST00000475591 ZNF141Q15928 474 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 AGAP6Q5VW22 663 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 IL20RBQ6UXL0 311 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 LSMEM1Q8N8F7 131 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 DTX3Q8N9I9 347 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 OR13C5Q8NGS8 318 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 OR5J2Q8NH18 312 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 OR51Q1Q8NH59 317 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 SMPDL3BQ92485 455 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 PMM1Q92871 262 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 AGAP4Q96P64 663 aa12.95□□□□□ -0.34
UBXN11-214ENST00000475591 MRPS33Q9Y291 106 aaKnown RBP12.95□□□□□ -0.34
UBXN11-214ENST00000475591 A8MUA0 341 aa12.94□□□□□ -0.34
UBXN11-214ENST00000475591 A8MV72 311 aaPredicted RBP12.94□□□□□ -0.34
UBXN11-214ENST00000475591 CSTAP01040 98 aa12.94□□□□□ -0.34
UBXN11-214ENST00000475591 GLULP15104 373 aa12.94□□□□□ -0.34
UBXN11-214ENST00000475591 SCN1BQ07699 218 aa12.94□□□□□ -0.34
UBXN11-214ENST00000475591 COL19A1Q14993 1142 aa12.94□□□□□ -0.34
UBXN11-214ENST00000475591 ELOCQ15369 112 aa12.94□□□□□ -0.34
UBXN11-214ENST00000475591 PRAMEF17Q5VTA0 474 aa12.94□□□□□ -0.34
UBXN11-214ENST00000475591 FAAH2Q6GMR7 532 aa12.94□□□□□ -0.34
UBXN11-214ENST00000475591 LINC00114Q6XXX2 140 aa12.94□□□□□ -0.34
UBXN11-214ENST00000475591 ZNF517Q6ZMY9 492 aaPredicted RBP12.94□□□□□ -0.34
UBXN11-214ENST00000475591 RTL4Q6ZR62 310 aa12.94□□□□□ -0.34
UBXN11-214ENST00000475591 UBQLNLQ8IYU4 475 aa12.94□□□□□ -0.34
UBXN11-214ENST00000475591 Q8N9G6 341 aaPredicted RBP12.94□□□□□ -0.34
UBXN11-214ENST00000475591 ZNRF4Q8WWF5 429 aa12.94□□□□□ -0.34
UBXN11-214ENST00000475591 B3GAT2Q9NPZ5 323 aa12.94□□□□□ -0.34
UBXN11-214ENST00000475591 RPS6KB2Q9UBS0 482 aa12.94□□□□□ -0.34
UBXN11-214ENST00000475591 TMEM221A6NGB7 291 aa12.94□□□□□ -0.34
UBXN11-214ENST00000475591 C4orf47A7E2U8 309 aa12.94□□□□□ -0.34
UBXN11-214ENST00000475591 CLDN4O14493 209 aa12.94□□□□□ -0.34
UBXN11-214ENST00000475591 PLA2G10O15496 165 aa12.94□□□□□ -0.34
UBXN11-214ENST00000475591 OIP5O43482 229 aa12.94□□□□□ -0.34
UBXN11-214ENST00000475591 DYRK3O43781 588 aa12.94□□□□□ -0.34
UBXN11-214ENST00000475591 PEPDP12955 493 aa12.94□□□□□ -0.34
UBXN11-214ENST00000475591 NME1P15531 152 aaKnown RBP12.94□□□□□ -0.34
UBXN11-214ENST00000475591 HK1P19367 917 aa12.94□□□□□ -0.34
UBXN11-214ENST00000475591 CD38P28907 300 aa12.94□□□□□ -0.34
UBXN11-214ENST00000475591 ATP12AP54707 1039 aa12.94□□□□□ -0.34
UBXN11-214ENST00000475591 OR10A3P58181 314 aa12.94□□□□□ -0.34
UBXN11-214ENST00000475591 PPP3R1P63098 170 aa12.94□□□□□ -0.34
UBXN11-214ENST00000475591 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.94□□□□□ -0.34
UBXN11-214ENST00000475591 GLCCI1Q86VQ1 547 aa12.94□□□□□ -0.34
UBXN11-214ENST00000475591 ZNF615Q8N8J6 731 aa12.94□□□□□ -0.34
UBXN11-214ENST00000475591 ZSCAN1Q8NBB4 408 aa12.94□□□□□ -0.34
UBXN11-214ENST00000475591 FAM98AQ8NCA5 519 aaKnown RBP12.94□□□□□ -0.34
UBXN11-214ENST00000475591 ZPLD1Q8TCW7 415 aa12.94□□□□□ -0.34
UBXN11-214ENST00000475591 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.94□□□□□ -0.34
UBXN11-214ENST00000475591 KLHDC3Q9BQ90 382 aa12.94□□□□□ -0.34
UBXN11-214ENST00000475591 POLHQ9Y253 713 aa12.94□□□□□ -0.34
UBXN11-214ENST00000475591 IER3IP1Q9Y5U9 82 aa12.94□□□□□ -0.34
UBXN11-214ENST00000475591 A0A1W2PR77 199 aa12.93□□□□□ -0.34
UBXN11-214ENST00000475591 SERINC4A6NH21 518 aa12.93□□□□□ -0.34
UBXN11-214ENST00000475591 TFP02787 698 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms