RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 MKLN1Q9UL63 735 aa14.18□□□□□ -0.14
CPSF3-203ENST00000475482 DTNAQ9Y4J8 743 aa14.18□□□□□ -0.14
CPSF3-203ENST00000475482 TACC2O95359 2948 aa14.18□□□□□ -0.14
CPSF3-203ENST00000475482 POLQO75417 2590 aa14.18□□□□□ -0.14
CPSF3-203ENST00000475482 CSMD2Q7Z408 3487 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 AGAP5A6NIR3 686 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 H0YJX3 145 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 SNPHO15079 494 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 TSPAN2O60636 221 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 FCMRO60667 390 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 ICOSLGO75144 302 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 NME6O75414 186 aaPredicted RBP14.17□□□□□ -0.14
CPSF3-203ENST00000475482 E2F6O75461 281 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 PRSS23O95084 383 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 MT-ND1P03886 318 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 ZNF23P17027 643 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 GDF1P27539 372 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 PEX2P28328 305 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 HSPA13P48723 471 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 SMIM11AP58511 58 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 VLDLRP98155 873 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 PLCXD2Q0VAA5 305 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 GPR68Q15743 365 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 DUSP7Q16829 419 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.17□□□□□ -0.14
CPSF3-203ENST00000475482 LRRC36Q1X8D7 754 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 FLYWCH1Q4VC44 716 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 C1orf185Q5T7R7 199 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 LPCAT4Q643R3 524 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 VASNQ6EMK4 673 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 NPSR1Q6W5P4 371 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 ZBTB49Q6ZSB9 765 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 SEM1Q6ZVN7 128 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 GDF7Q7Z4P5 450 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 HIPK1Q86Z02 1210 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 ZDHHC13Q8IUH4 622 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 CCDC71Q8IV32 467 aaPredicted RBP14.17□□□□□ -0.14
CPSF3-203ENST00000475482 OR10Q1Q8NGQ4 319 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 FAM110BQ8TC76 370 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 C14orf79Q96F83 325 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 C7orf34Q96L11 122 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 TIMP4Q99727 224 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 TACO1Q9BSH4 297 aaKnown RBP14.17□□□□□ -0.14
CPSF3-203ENST00000475482 REEP1Q9H902 201 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 NPDC1Q9NQX5 325 aaPredicted RBP14.17□□□□□ -0.14
CPSF3-203ENST00000475482 ENPP4Q9Y6X5 453 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 PCNX3Q9H6A9 2034 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 DOCK7Q96N67 2140 aa14.17□□□□□ -0.14
CPSF3-203ENST00000475482 A0A0G2JNJ9 132 aa14.16□□□□□ -0.14
CPSF3-203ENST00000475482 GXYLT2A0PJZ3 443 aa14.16□□□□□ -0.14
CPSF3-203ENST00000475482 AHRRA9YTQ3 701 aa14.16□□□□□ -0.14
CPSF3-203ENST00000475482 hCG_2039718K7EN88 272 aa14.16□□□□□ -0.14
CPSF3-203ENST00000475482 ABCB7O75027 752 aa14.16□□□□□ -0.14
CPSF3-203ENST00000475482 LGI1O95970 557 aa14.16□□□□□ -0.14
CPSF3-203ENST00000475482 RHCEP18577 417 aa14.16□□□□□ -0.14
CPSF3-203ENST00000475482 RPS4Y1P22090 263 aaKnown RBP14.16□□□□□ -0.14
CPSF3-203ENST00000475482 ADH7P40394 386 aa14.16□□□□□ -0.14
CPSF3-203ENST00000475482 MASP1P48740 699 aa14.16□□□□□ -0.14
CPSF3-203ENST00000475482 CCNJQ5T5M9 372 aa14.16□□□□□ -0.14
CPSF3-203ENST00000475482 FIGNL1Q6PIW4 674 aa14.16□□□□□ -0.14
CPSF3-203ENST00000475482 WDSUB1Q8N9V3 476 aa14.16□□□□□ -0.14
CPSF3-203ENST00000475482 ZNF527Q8NB42 609 aa14.16□□□□□ -0.14
CPSF3-203ENST00000475482 OR5K1Q8NHB7 308 aa14.16□□□□□ -0.14
CPSF3-203ENST00000475482 TMBIM1Q969X1 311 aa14.16□□□□□ -0.14
CPSF3-203ENST00000475482 NRBF2Q96F24 287 aa14.16□□□□□ -0.14
CPSF3-203ENST00000475482 ZNF300Q96RE9 604 aaPredicted RBP14.16□□□□□ -0.14
CPSF3-203ENST00000475482 OSBPL11Q9BXB4 747 aa14.16□□□□□ -0.14
CPSF3-203ENST00000475482 UCK2Q9BZX2 261 aa14.16□□□□□ -0.14
CPSF3-203ENST00000475482 PRDM14Q9GZV8 571 aa14.16□□□□□ -0.14
CPSF3-203ENST00000475482 EXO5Q9H790 373 aa14.16□□□□□ -0.14
CPSF3-203ENST00000475482 METTL7AQ9H8H3 244 aa14.16□□□□□ -0.14
CPSF3-203ENST00000475482 Q9UFV3 132 aa14.16□□□□□ -0.14
CPSF3-203ENST00000475482 ZNF443Q9Y2A4 671 aaPredicted RBP14.16□□□□□ -0.14
CPSF3-203ENST00000475482 KIAA1549Q9HCM3 1950 aa14.16□□□□□ -0.14
CPSF3-203ENST00000475482 SPG11Q96JI7 2443 aa14.15□□□□□ -0.14
CPSF3-203ENST00000475482 PRAMEF25A6NGN4 478 aa14.15□□□□□ -0.14
CPSF3-203ENST00000475482 TMEM229AB2RXF0 380 aa14.15□□□□□ -0.14
CPSF3-203ENST00000475482 G3V2T6 193 aa14.15□□□□□ -0.14
CPSF3-203ENST00000475482 NID1P14543 1247 aa14.15□□□□□ -0.14
CPSF3-203ENST00000475482 MSX1P28360 303 aa14.15□□□□□ -0.14
CPSF3-203ENST00000475482 DNAJA1P31689 397 aaKnown RBP14.15□□□□□ -0.14
CPSF3-203ENST00000475482 PNLIPRP2P54317 469 aa14.15□□□□□ -0.14
CPSF3-203ENST00000475482 GAS1P54826 345 aa14.15□□□□□ -0.14
CPSF3-203ENST00000475482 RIPPLY2Q5TAB7 128 aa14.15□□□□□ -0.14
CPSF3-203ENST00000475482 RNF220Q5VTB9 566 aa14.15□□□□□ -0.14
CPSF3-203ENST00000475482 PPP4R4Q6NUP7 873 aa14.15□□□□□ -0.14
CPSF3-203ENST00000475482 CARM1Q86X55 608 aa14.15□□□□□ -0.14
CPSF3-203ENST00000475482 CMIPQ8IY22 773 aa14.15□□□□□ -0.14
CPSF3-203ENST00000475482 GPR32P1Q8NGA4 272 aa14.15□□□□□ -0.14
CPSF3-203ENST00000475482 OR1J4Q8NGS1 313 aa14.15□□□□□ -0.14
CPSF3-203ENST00000475482 EPYCQ99645 322 aa14.15□□□□□ -0.14
CPSF3-203ENST00000475482 ZNF184Q99676 751 aaPredicted RBP14.15□□□□□ -0.14
CPSF3-203ENST00000475482 PIP5K1AQ99755 562 aa14.15□□□□□ -0.14
CPSF3-203ENST00000475482 CIB1Q99828 191 aa14.15□□□□□ -0.14
CPSF3-203ENST00000475482 GALNT9Q9HCQ5 603 aa14.15□□□□□ -0.14
CPSF3-203ENST00000475482 KCNJ16Q9NPI9 418 aa14.15□□□□□ -0.14
CPSF3-203ENST00000475482 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.15□□□□□ -0.14
CPSF3-203ENST00000475482 NDUFAF4Q9P032 175 aa14.15□□□□□ -0.14
CPSF3-203ENST00000475482 OAZ3Q9UMX2 235 aa14.15□□□□□ -0.14
CPSF3-203ENST00000475482 ABCG2Q9UNQ0 655 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms