RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 MPPED2Q15777 294 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 SMN1Q16637 294 aaKnown RBP5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 VPS26BQ4G0F5 336 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 C6orf226Q5I0X4 101 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 STPG1Q5TH74 334 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 SYPL2Q5VXT5 272 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 TXNDC8Q6A555 127 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 OR52W1Q6IF63 320 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 ADAM5Q6NVV9 412 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 G2E3Q7L622 706 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 DPY19L4Q7Z388 723 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 TMEM135Q86UB9 458 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 CMTM8Q8IZV2 173 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 OR4N4Q8N0Y3 316 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 IGDCC4Q8TDY8 1250 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 PIGCQ92535 297 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 SUSD6Q92537 303 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 NR4A3Q92570 626 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 C14orf144Q96I85 54 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 SLC45A3Q96JT2 553 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 TIMM29Q9BSF4 260 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 EML4Q9HC35 981 aaKnown RBP5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 SLC23A1Q9UHI7 598 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 PRPF19Q9UMS4 504 aaKnown RBP5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 FOXJ3Q9UPW0 622 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 CSDC2Q9Y534 153 aaKnown RBP5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 ARAP2Q8WZ64 1704 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 TRBV11-1A0A0K0K1C0 115 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 CGB1A6NKQ9 187 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 H0YIG0 161 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 EEF2KO00418 725 aaKnown RBP5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 BHLHE40O14503 412 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 IMPA2O14732 288 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 PSTPIP1O43586 416 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 NRP2O60462 931 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 FCGR3BO75015 233 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 BANF1O75531 89 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 ACTL6AO96019 429 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 CD5P06127 495 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 CELA3BP08861 270 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 IFI30P13284 250 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 NQO1P15559 274 aaKnown RBP5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 RBP2P50120 134 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 VAV2P52735 878 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 LIMK2P53671 638 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 CLDN18P56856 261 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 SLC34A1Q06495 639 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 ARHGAP1Q07960 439 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 TNK1Q13470 666 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 HLFQ16534 295 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 GCSAMLQ5JQS6 135 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 PPM1LQ5SGD2 360 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 C9orf64Q5T6V5 341 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 DPY19L2P2Q6ZN68 376 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 TMEM144Q7Z5S9 345 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 SPRED2Q7Z698 418 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 TMEM126BQ8IUX1 230 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 TMEM132CQ8N3T6 1108 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 SMG8Q8ND04 991 aaKnown RBP5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 OR52H1Q8NGJ2 320 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 OR9A4Q8NGU2 314 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 OR4K15Q8NH41 348 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 PIK3R3Q92569 461 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 FAM136AQ96C01 138 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 HSPA12BQ96MM6 686 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 TMEM56Q96MV1 263 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 LMF2Q9BU23 707 aaKnown RBP5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 GGACTQ9BVM4 153 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 SIK2Q9H0K1 926 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 TMEM38AQ9H6F2 299 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 CPNE5Q9HCH3 593 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 SIRT7Q9NRC8 400 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 CYSLTR2Q9NS75 346 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 CUTCQ9NTM9 273 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 ING3Q9NXR8 418 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 XPR1Q9UBH6 696 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 NXT1Q9UKK6 140 aaKnown RBP5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 RAXQ9Y2V3 346 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 SF3B6Q9Y3B4 125 aaKnown RBP5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 TMEM56-RWDD3S4R434 201 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 PLXNB2O15031 1838 aa5.6□□□□□ -1.51
SMARCE1-208ENST00000474246 LOC102723971A0A1B0GUV8 181 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 LINC01553A4QN01 128 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 DISC1C4P0D8 188 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 G3V2T6 193 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 G3V3Y1 287 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 F2RL2O00254 374 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 SLC28A1O00337 649 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 MAN2B1O00754 1011 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 CDIPTO14735 213 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 SIVA1O15304 175 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 PCDH7O60245 1069 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 CBX6O95503 412 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 TSPAN12O95859 305 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 CSNK2A2P19784 350 aaPredicted RBP5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 PSMB4P28070 264 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 RBMS1P29558 406 aaKnown RBP5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 CALCRP30988 508 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 PRDX2P32119 198 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 AVPR1AP37288 418 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms